Strain Fitness in Shewanella amazonensis SB2B around Sama_3626

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
4,267,521	+		Sama_3625	0.59	-0.7
4,267,521	+		Sama_3625	0.59	+0.1
4,267,522	-		Sama_3625	0.60	-0.1
4,267,522	-		Sama_3625	0.60	+4.8
4,267,575	+		Sama_3625	0.62	+0.1
4,267,575	+		Sama_3625	0.62	+1.2
4,267,576	-		Sama_3625	0.62	-0.2
4,267,620	+		Sama_3625	0.64	+2.0
4,267,620	+		Sama_3625	0.64	+0.3
4,267,620	+		Sama_3625	0.64	-1.2
4,267,620	+		Sama_3625	0.64	-0.9
4,267,620	+		Sama_3625	0.64	-0.5
4,267,620	+		Sama_3625	0.64	-1.3
4,267,621	-		Sama_3625	0.64	-0.5
4,267,621	-		Sama_3625	0.64	-0.3
4,267,621	-		Sama_3625	0.64	+1.1
4,267,684	+		Sama_3625	0.67	-0.1
4,267,685	-		Sama_3625	0.67	+1.3
4,267,703	-		Sama_3625	0.68	-0.4
4,267,729	+		Sama_3625	0.69	+0.0
4,267,729	+		Sama_3625	0.69	+1.7
4,267,729	+		Sama_3625	0.69	+0.1
4,267,730	-		Sama_3625	0.69	+1.6
4,267,730	-		Sama_3625	0.69	-1.4
4,267,750	+		Sama_3625	0.70	+1.9
4,267,750	+		Sama_3625	0.70	+0.7
4,267,750	+		Sama_3625	0.70	-0.8
4,267,750	+		Sama_3625	0.70	-1.0
4,267,750	+		Sama_3625	0.70	-0.8
4,267,750	+		Sama_3625	0.70	+0.3
4,267,750	+		Sama_3625	0.70	-0.6
4,267,751	-		Sama_3625	0.70	+0.7
4,267,751	-		Sama_3625	0.70	+0.2
4,267,751	-		Sama_3625	0.70	+0.0
4,267,751	-		Sama_3625	0.70	-1.1
4,267,751	-		Sama_3625	0.70	-0.2
4,267,751	-		Sama_3625	0.70	-2.7
4,267,751	-		Sama_3625	0.70	+0.1
4,267,835	+		Sama_3625	0.74	-0.5
4,267,835	+		Sama_3625	0.74	-2.8
4,267,863	+		Sama_3625	0.75	+0.3
4,267,863	+		Sama_3625	0.75	-1.6
4,267,863	+		Sama_3625	0.75	+0.1
4,267,864	-		Sama_3625	0.75	+0.0
4,267,864	-		Sama_3625	0.75	+0.1
4,268,000	+		Sama_3625	0.82	-1.2
4,268,000	+		Sama_3625	0.82	+2.9
4,268,000	+		Sama_3625	0.82	-0.1
4,268,000	+		Sama_3625	0.82	-1.2
4,268,000	+		Sama_3625	0.82	+1.1
4,268,000	+		Sama_3625	0.82	-0.5
4,268,000	+		Sama_3625	0.82	+1.6
4,268,000	+		Sama_3625	0.82	+0.9
4,268,001	-		Sama_3625	0.82	+0.1
4,268,001	-		Sama_3625	0.82	-1.4
4,268,004	+		Sama_3625	0.82	-1.2
4,268,004	+		Sama_3625	0.82	-0.2
4,268,004	+		Sama_3625	0.82	-0.3
4,268,004	+		Sama_3625	0.82	-1.3
4,268,004	+		Sama_3625	0.82	-0.3
4,268,004	+		Sama_3625	0.82	-2.3
4,268,004	+		Sama_3625	0.82	+1.9
4,268,004	+		Sama_3625	0.82	-3.3
4,268,004	+		Sama_3625	0.82	-0.3
4,268,004	+		Sama_3625	0.82	+0.2
4,268,004	+		Sama_3625	0.82	-1.0
4,268,004	+		Sama_3625	0.82	+1.7
4,268,005	-		Sama_3625	0.82	-0.4
4,268,005	-		Sama_3625	0.82	+1.7
4,268,005	-		Sama_3625	0.82	-0.7
4,268,005	-		Sama_3625	0.82	+0.4
4,268,005	-		Sama_3625	0.82	-2.9
4,268,005	-		Sama_3625	0.82	-0.8
4,268,005	-		Sama_3625	0.82	+0.1
4,268,005	-		Sama_3625	0.82	-0.0
4,268,005	-		Sama_3625	0.82	-0.2
4,268,005	-		Sama_3625	0.82	+0.1
4,268,005	-		Sama_3625	0.82	+0.3
4,268,005	-		Sama_3625	0.82	+0.9
4,268,005	-		Sama_3625	0.82	+0.3
4,268,005	-		Sama_3625	0.82	-0.9
4,268,012	+		Sama_3625	0.82	-0.3
4,268,012	+		Sama_3625	0.82	+0.9
4,268,012	+		Sama_3625	0.82	-0.5
4,268,013	-		Sama_3625	0.82	+0.9
4,268,014	-		Sama_3625	0.82	-0.4
4,268,019	-		Sama_3625	0.83	-1.5
4,268,021	+		Sama_3625	0.83	+1.1
4,268,022	-		Sama_3625	0.83	-1.4
4,268,022	-		Sama_3625	0.83	-0.6
4,268,022	-		Sama_3625	0.83	-0.0
4,268,026	+		Sama_3625	0.83	+0.6
4,268,026	+		Sama_3625	0.83	-0.4
4,268,027	-		Sama_3625	0.83	+1.5
4,268,051	+		Sama_3625	0.84	-0.4
4,268,051	+		Sama_3625	0.84	-0.1
4,268,051	+		Sama_3625	0.84	-1.2
4,268,052	-		Sama_3625	0.84	-1.2
4,268,052	-		Sama_3625	0.84	-0.6
4,268,052	-		Sama_3625	0.84	-1.2
4,268,052	-		Sama_3625	0.84	+0.1
4,268,077	-		Sama_3625	0.85	+0.0
4,268,077	-		Sama_3625	0.85	+0.1
4,268,077	-		Sama_3625	0.85	+0.4
4,268,180	-				-0.4
4,268,180	-				+0.4
4,268,180	-				+1.0
4,268,192	+				+1.6
4,268,267	+				-0.2
4,268,267	+				+0.3
4,268,268	-				+1.0
4,268,269	+				-1.4
4,268,269	+				+0.5
4,268,270	-				-0.4
4,268,282	+				-0.4
4,268,282	+				+2.0
4,268,282	+				+0.6
4,268,291	+				+1.3
4,268,335	+				-0.6
4,268,335	+				-0.0
4,268,336	-				+1.5
4,268,336	-				+0.6
4,268,336	-				+0.8
4,268,389	+				-2.1
4,268,389	+				-1.3
4,268,389	+				-1.8
4,268,389	+				+0.5
4,268,389	+				+0.8
4,268,389	+				-1.4
4,268,389	+				+0.6
4,268,389	+				-0.7
4,268,389	+				-0.9
4,268,389	+				-0.8
4,268,389	+				-0.6
4,268,390	-				-0.1
4,268,390	-				-0.6
4,268,390	-				+0.0
4,268,390	-				-0.8
4,268,390	-				-0.2
4,268,390	-				+0.7
4,268,390	-				-0.9
4,268,390	-				-0.4
4,268,390	-				+0.4
4,268,390	-				+1.3
4,268,390	-				-1.5
4,268,390	-				+0.1
4,268,393	+				-1.4
4,268,393	+				-2.8
4,268,393	+				+0.9
4,268,393	+				+0.7
4,268,394	-				+1.0
4,268,394	-				+1.1
4,268,394	-				+1.6
4,268,394	-				+0.7
4,268,400	+				+0.2
4,268,417	+				-0.3
4,268,464	-				+0.9
4,268,464	-				-0.2
4,268,476	+				+0.8
4,268,476	+				+1.1
4,268,476	+				-0.1
4,268,476	+				-0.5
4,268,476	+				+1.1
4,268,477	-				+3.3
4,268,477	-				-0.5
4,268,477	-				+0.9
4,268,484	+				-0.3
4,268,484	+				-2.5
4,268,484	+				-2.5
4,268,525	+		Sama_3626	0.11	-0.1
4,268,562	-		Sama_3626	0.17	+1.6
4,268,598	+		Sama_3626	0.23	+0.0
4,268,599	-		Sama_3626	0.23	-0.9
4,268,622	-		Sama_3626	0.27	+0.3
4,268,645	+		Sama_3626	0.31	-1.2
4,268,646	-		Sama_3626	0.31	+0.1
4,268,662	+		Sama_3626	0.34	-1.0
4,268,662	+		Sama_3626	0.34	-2.7
4,268,663	-		Sama_3626	0.34	-1.1
4,268,663	-		Sama_3626	0.34	+1.3
4,268,746	+		Sama_3626	0.48	-1.0
4,268,747	-		Sama_3626	0.48	-0.7
4,268,747	-		Sama_3626	0.48	-0.0
4,268,778	-		Sama_3626	0.53	-0.9
4,268,778	-		Sama_3626	0.53	+1.2
4,268,778	-		Sama_3626	0.53	+0.1
4,268,778	-		Sama_3626	0.53	-0.4
4,268,778	-		Sama_3626	0.53	+0.9
4,268,806	+		Sama_3626	0.58	-1.0
4,268,806	+		Sama_3626	0.58	+0.4
4,268,806	+		Sama_3626	0.58	-0.4
4,268,807	-		Sama_3626	0.58	+0.6
4,268,807	-		Sama_3626	0.58	+1.1
4,268,807	-		Sama_3626	0.58	+0.4
4,268,807	-		Sama_3626	0.58	-0.6
4,268,842	+		Sama_3626	0.64	+1.1
4,268,843	-		Sama_3626	0.64	-0.2
4,268,843	-		Sama_3626	0.64	+2.3
4,268,880	-		Sama_3626	0.70	-0.4
4,268,951	-		Sama_3626	0.82	+2.7
4,268,951	-		Sama_3626	0.82	+2.2
4,268,951	-		Sama_3626	0.82	-0.4
4,268,951	-		Sama_3626	0.82	+0.1
4,268,951	-		Sama_3626	0.82	-0.6
4,268,971	+		Sama_3626	0.85	+0.3
4,268,971	+		Sama_3626	0.85	+1.7
4,268,972	-		Sama_3626	0.85	+1.1
4,268,972	-		Sama_3626	0.85	+0.6
4,268,972	-		Sama_3626	0.85	+0.9
4,268,993	+		Sama_3626	0.89	-0.5
4,269,035	+				+0.9
4,269,035	+				-1.7
4,269,036	-				-1.2
4,269,058	+				+1.4
4,269,059	-				-0.5
4,269,059	-				-0.3
4,269,065	+				-0.4
4,269,065	+				+0.9
4,269,065	+				-0.1
4,269,065	+				+1.0
4,269,065	+				-0.3
4,269,065	+				-0.3
4,269,065	+				+0.3
4,269,066	-				+2.5
4,269,066	-				+0.3
4,269,066	-				-0.8
4,269,079	+				-0.1
4,269,099	+				-0.6
4,269,099	+				-1.6
4,269,100	-				+0.4
4,269,100	-				-1.3
4,269,100	-				+1.0
4,269,100	-				+0.3
4,269,100	-				+1.0
4,269,100	-				-0.2
4,269,100	-				+0.7
4,269,102	+				+0.1
4,269,102	+				-0.5
4,269,102	+				+0.0
4,269,102	+				-0.5
4,269,103	-				-2.5
4,269,103	-				-1.0
4,269,103	-				-0.1
4,269,103	-				+0.4
4,269,103	-				-0.6
4,269,103	-				-1.4
4,269,103	-				+3.7
4,269,103	-				+0.9
4,269,103	-				-0.4
4,269,103	-				-0.9
4,269,103	-				+0.8
4,269,103	-				-1.2
4,269,106	+				-0.5
4,269,106	+				-0.2
4,269,106	+				-0.2
4,269,106	+				+1.2
4,269,106	+				-0.9
4,269,106	+				-0.8
4,269,106	+				+0.1
4,269,106	+				-0.4
4,269,106	+				-0.4
4,269,106	+				-2.2
4,269,106	+				-2.0
4,269,106	+				+1.3
4,269,106	+				-0.3
4,269,106	+				-2.0
4,269,106	+				-1.0
4,269,106	+				-0.4
4,269,106	+				-0.4
4,269,107	-				+0.3
4,269,107	-				+0.5
4,269,107	-				+1.6
4,269,107	-				-0.5
4,269,107	-				+0.1
4,269,107	-				+0.4
4,269,107	-				+0.1
4,269,107	-				+0.1
4,269,107	-				+0.9
4,269,107	-				-1.9
4,269,107	-				+0.8
4,269,107	-				-0.2
4,269,107	-				-0.8
4,269,107	-				+0.0
4,269,107	-				-0.2
4,269,107	-				-0.4
4,269,107	-				-1.6
4,269,107	-				+0.3
4,269,107	-				-0.9
4,269,107	-				+0.5
4,269,107	-				+1.5
4,269,109	+				+0.1
4,269,109	+				-0.1
4,269,109	+				-0.5
4,269,109	+				-0.6
4,269,109	+				+1.8
4,269,109	+				-0.4
4,269,110	-				-0.8
4,269,110	-				+0.1
4,269,110	-				+0.7
4,269,110	-				-1.1
4,269,111	+				+0.6
4,269,111	+				-0.3
4,269,111	+				+0.3
4,269,112	-				-0.2
4,269,112	-				-1.6
4,269,112	-				-0.7
4,269,112	-				-0.7
4,269,134	-				-0.1
4,269,156	+				-0.8
4,269,156	+				-0.2
4,269,156	+				-1.9
4,269,157	-				-1.2
4,269,186	+				-0.3
4,269,186	+				+0.6
4,269,187	-				-0.3
4,269,187	-				-0.3
4,269,187	-				+0.8
4,269,187	-				+0.6
4,269,233	+				-0.3
4,269,233	+				+1.4
4,269,245	+				+1.5
4,269,246	-				-2.3
4,269,266	-				+0.4
4,269,275	-				-0.1
4,269,336	+				+1.3
4,269,337	-				-0.2
4,269,337	-				-0.0
4,269,339	+				+0.3
4,269,339	+				+1.4
4,269,340	-				+0.2
4,269,340	-				-0.4
4,269,342	+				-0.1
4,269,342	+				-0.5
4,269,343	-				-0.7
4,269,351	+				+1.4
4,269,355	+		Sama_3627	0.10	-1.1
4,269,374	-		Sama_3627	0.11	+1.0
4,269,374	-		Sama_3627	0.11	+0.1
4,269,374	-		Sama_3627	0.11	+0.0
4,269,380	-		Sama_3627	0.11	-0.5
4,269,432	+		Sama_3627	0.14	-0.3
4,269,432	+		Sama_3627	0.14	-0.7
4,269,437	+		Sama_3627	0.14	+1.3
4,269,437	+		Sama_3627	0.14	-0.7
4,269,437	+		Sama_3627	0.14	-1.4
4,269,437	+		Sama_3627	0.14	+0.1
4,269,438	-		Sama_3627	0.14	-0.5
4,269,441	+		Sama_3627	0.14	-0.8
4,269,441	+		Sama_3627	0.14	-0.3
4,269,441	+		Sama_3627	0.14	-0.4
4,269,441	+		Sama_3627	0.14	+2.5
4,269,441	+		Sama_3627	0.14	+1.7
4,269,442	-		Sama_3627	0.14	-1.4
4,269,453	-		Sama_3627	0.15	+0.4
4,269,460	-		Sama_3627	0.15	-0.3
4,269,472	+		Sama_3627	0.15	-2.5
4,269,473	-		Sama_3627	0.16	+0.3
4,269,473	-		Sama_3627	0.16	-1.0
4,269,473	-		Sama_3627	0.16	-0.6
4,269,499	+		Sama_3627	0.17	-0.6
4,269,499	+		Sama_3627	0.17	-0.5
4,269,500	-		Sama_3627	0.17	-0.0
4,269,515	-		Sama_3627	0.18	-1.0
4,269,556	+		Sama_3627	0.19	+0.4
4,269,557	-		Sama_3627	0.19	-0.3
4,269,557	-		Sama_3627	0.19	-2.0
4,269,567	+		Sama_3627	0.20	+0.0
4,269,567	+		Sama_3627	0.20	+1.3
4,269,567	+		Sama_3627	0.20	-1.1
4,269,567	+		Sama_3627	0.20	-1.6
4,269,568	-		Sama_3627	0.20	-2.1
4,269,568	-		Sama_3627	0.20	-1.3
4,269,568	-		Sama_3627	0.20	-0.2
4,269,601	+		Sama_3627	0.22	-0.3
4,269,601	+		Sama_3627	0.22	-0.2
4,269,601	+		Sama_3627	0.22	-1.1
4,269,601	+		Sama_3627	0.22	-0.3
4,269,602	-		Sama_3627	0.22	-1.3
4,269,730	+		Sama_3627	0.28	+0.0
4,269,731	-		Sama_3627	0.28	+0.4
4,269,742	+		Sama_3627	0.28	-0.2
4,269,743	-		Sama_3627	0.28	+0.1
4,269,744	+		Sama_3627	0.28	+0.0
4,269,744	+		Sama_3627	0.28	-1.0
4,269,744	+		Sama_3627	0.28	-0.4
4,269,744	+		Sama_3627	0.28	-0.8
4,269,744	+		Sama_3627	0.28	-1.4
4,269,744	+		Sama_3627	0.28	+0.3
4,269,744	+		Sama_3627	0.28	-1.3
4,269,744	+		Sama_3627	0.28	+0.1
4,269,745	-		Sama_3627	0.28	-0.8
4,269,745	-		Sama_3627	0.28	-1.9
4,269,745	-		Sama_3627	0.28	-0.1
4,269,745	-		Sama_3627	0.28	-1.6
4,269,745	-		Sama_3627	0.28	+0.7
4,269,745	-		Sama_3627	0.28	-0.2
4,269,745	-		Sama_3627	0.28	-0.4
4,269,748	+		Sama_3627	0.28	-2.2
4,269,748	+		Sama_3627	0.28	+0.3
4,269,748	+		Sama_3627	0.28	+0.3
4,269,748	+		Sama_3627	0.28	-1.1
4,269,748	+		Sama_3627	0.28	+1.0
4,269,748	+		Sama_3627	0.28	+1.8
4,269,748	+		Sama_3627	0.28	+1.7
4,269,748	+		Sama_3627	0.28	+0.0
4,269,748	+		Sama_3627	0.28	+0.7
4,269,748	+		Sama_3627	0.28	-0.5
4,269,748	+		Sama_3627	0.28	-1.4
4,269,748	+		Sama_3627	0.28	+0.2
4,269,749	-		Sama_3627	0.28	+0.1
4,269,749	-		Sama_3627	0.28	+0.4
4,269,749	-		Sama_3627	0.28	-1.3
4,269,749	-		Sama_3627	0.28	+2.9
4,269,749	-		Sama_3627	0.28	-0.2
4,269,749	-		Sama_3627	0.28	-0.2
4,269,749	-		Sama_3627	0.28	+0.4
4,269,749	-		Sama_3627	0.28	-0.2
4,269,749	-		Sama_3627	0.28	+0.1
4,269,749	-		Sama_3627	0.28	-0.1
4,269,749	-		Sama_3627	0.28	-0.6
4,269,749	-		Sama_3627	0.28	+0.7
4,269,749	-		Sama_3627	0.28	-0.4
4,269,749	-		Sama_3627	0.28	-0.3
4,269,749	-		Sama_3627	0.28	+0.4
4,269,780	+		Sama_3627	0.30	+0.1
4,269,916	+		Sama_3627	0.36	+0.2
4,269,917	-		Sama_3627	0.36	+1.7
4,269,917	-		Sama_3627	0.36	-1.6
4,269,917	-		Sama_3627	0.36	+0.1
4,270,010	+		Sama_3627	0.41	+0.3
4,270,010	+		Sama_3627	0.41	-1.8
4,270,010	+		Sama_3627	0.41	+1.1
4,270,010	+		Sama_3627	0.41	-0.3
4,270,010	+		Sama_3627	0.41	+0.2
4,270,010	+		Sama_3627	0.41	+1.0
4,270,010	+		Sama_3627	0.41	-1.1
4,270,010	+		Sama_3627	0.41	+1.7
4,270,010	+		Sama_3627	0.41	-1.9
4,270,011	-		Sama_3627	0.41	+0.8
4,270,011	-		Sama_3627	0.41	-1.8
4,270,011	-		Sama_3627	0.41	-2.0
4,270,011	-		Sama_3627	0.41	-0.1
4,270,011	-		Sama_3627	0.41	-0.1
4,270,011	-		Sama_3627	0.41	-0.3
4,270,011	-		Sama_3627	0.41	-0.1
4,270,011	-		Sama_3627	0.41	+0.6
4,270,011	-		Sama_3627	0.41	-0.4
4,270,011	-		Sama_3627	0.41	-0.0
4,270,011	-		Sama_3627	0.41	+1.9
4,270,011	-		Sama_3627	0.41	-0.8
4,270,011	-		Sama_3627	0.41	-1.0
4,270,011	-		Sama_3627	0.41	-2.8
4,270,011	-		Sama_3627	0.41	+1.9
4,270,014	+		Sama_3627	0.41	-0.6
4,270,014	+		Sama_3627	0.41	-0.3
4,270,014	+		Sama_3627	0.41	+1.3
4,270,014	+		Sama_3627	0.41	+0.6
4,270,015	-		Sama_3627	0.41	-1.4
4,270,015	-		Sama_3627	0.41	+0.6
4,270,015	-		Sama_3627	0.41	-1.2
4,270,015	-		Sama_3627	0.41	-0.7
4,270,015	-		Sama_3627	0.41	+0.1