Strain Fitness in Shewanella amazonensis SB2B around Sama_3152

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
3,738,953	+				-1.2
3,738,953	+				+0.6
3,738,953	+				-0.4
3,738,954	-				+0.3
3,738,954	-				-0.0
3,738,954	-				+1.0
3,738,954	-				-0.9
3,738,969	+				-0.8
3,738,970	-				+1.6
3,738,973	+				-0.5
3,738,973	+				+0.1
3,738,973	+				-1.2
3,738,973	+				-0.6
3,738,973	+				-0.4
3,738,973	+				-0.2
3,738,973	+				-0.1
3,738,973	+				-1.7
3,738,973	+				-0.1
3,738,973	+				-0.1
3,738,973	+				-1.1
3,738,973	+				-0.2
3,738,973	+				-1.0
3,738,973	+				-1.8
3,738,973	+				-1.5
3,738,973	+				+1.0
3,738,974	-				+0.9
3,738,974	-				-0.1
3,738,974	-				-0.0
3,738,974	-				+0.9
3,738,974	-				-0.5
3,738,974	-				-0.9
3,738,974	-				-0.3
3,738,974	-				-1.8
3,738,974	-				+0.1
3,738,974	-				-0.1
3,738,974	-				+0.6
3,738,974	-				-1.4
3,738,974	-				-1.6
3,738,975	+				-0.2
3,738,975	+				+0.1
3,738,975	+				+0.4
3,738,975	+				-1.1
3,738,975	+				-1.2
3,738,975	+				+0.8
3,738,975	+				-1.9
3,738,976	-				-1.0
3,738,976	-				-2.1
3,738,976	-				-1.0
3,738,986	+				-0.4
3,738,986	+				+0.3
3,738,987	-				+3.3
3,739,059	+				+0.0
3,739,059	+				+0.5
3,739,275	+		Sama_3151	0.32	-0.6
3,739,276	-		Sama_3151	0.32	+0.8
3,739,376	+		Sama_3151	0.43	-0.1
3,739,377	-		Sama_3151	0.43	-0.0
3,739,377	-		Sama_3151	0.43	-0.1
3,739,377	-		Sama_3151	0.43	+0.1
3,739,377	-		Sama_3151	0.43	+0.6
3,739,377	-		Sama_3151	0.43	-0.1
3,739,377	-		Sama_3151	0.43	-1.2
3,739,400	-		Sama_3151	0.46	+1.1
3,739,489	-		Sama_3151	0.55	+2.4
3,739,546	-		Sama_3151	0.62	-0.2
3,739,559	+		Sama_3151	0.63	+0.3
3,739,559	+		Sama_3151	0.63	-0.0
3,739,559	+		Sama_3151	0.63	-0.1
3,739,559	+		Sama_3151	0.63	+0.7
3,739,559	+		Sama_3151	0.63	+0.6
3,739,560	-		Sama_3151	0.63	-2.6
3,739,560	-		Sama_3151	0.63	-0.6
3,739,560	-		Sama_3151	0.63	+1.0
3,739,560	-		Sama_3151	0.63	+0.3
3,739,560	-		Sama_3151	0.63	-0.1
3,739,560	-		Sama_3151	0.63	-0.4
3,739,560	-		Sama_3151	0.63	+1.2
3,739,560	-		Sama_3151	0.63	+2.7
3,739,560	-		Sama_3151	0.63	-1.4
3,739,596	+		Sama_3151	0.67	-1.0
3,739,596	+		Sama_3151	0.67	+0.9
3,739,596	+		Sama_3151	0.67	+0.3
3,739,596	+		Sama_3151	0.67	-1.0
3,739,597	-		Sama_3151	0.67	+1.9
3,739,613	+		Sama_3151	0.69	-1.1
3,739,613	+		Sama_3151	0.69	-2.1
3,739,613	+		Sama_3151	0.69	+2.9
3,739,613	+		Sama_3151	0.69	-0.9
3,739,613	+		Sama_3151	0.69	+2.6
3,739,613	+		Sama_3151	0.69	+0.1
3,739,613	+		Sama_3151	0.69	+0.2
3,739,613	+		Sama_3151	0.69	+0.3
3,739,613	+		Sama_3151	0.69	-1.1
3,739,613	+		Sama_3151	0.69	+0.9
3,739,613	+		Sama_3151	0.69	-0.3
3,739,613	+		Sama_3151	0.69	-0.6
3,739,613	+		Sama_3151	0.69	+0.1
3,739,613	+		Sama_3151	0.69	-1.3
3,739,613	+		Sama_3151	0.69	+0.7
3,739,613	+		Sama_3151	0.69	-0.9
3,739,614	-		Sama_3151	0.69	+0.3
3,739,614	-		Sama_3151	0.69	+0.6
3,739,614	-		Sama_3151	0.69	-1.2
3,739,614	-		Sama_3151	0.69	+0.6
3,739,614	-		Sama_3151	0.69	+0.5
3,739,614	-		Sama_3151	0.69	-1.4
3,739,614	-		Sama_3151	0.69	-0.0
3,739,614	-		Sama_3151	0.69	-0.3
3,739,614	-		Sama_3151	0.69	-0.5
3,739,614	-		Sama_3151	0.69	-0.1
3,739,614	-		Sama_3151	0.69	-0.1
3,739,614	-		Sama_3151	0.69	-0.9
3,739,614	-		Sama_3151	0.69	-0.5
3,739,635	+		Sama_3151	0.71	-1.5
3,739,635	+		Sama_3151	0.71	+0.4
3,739,635	+		Sama_3151	0.71	-0.8
3,739,635	+		Sama_3151	0.71	+0.4
3,739,636	-		Sama_3151	0.71	+0.2
3,739,636	-		Sama_3151	0.71	-1.4
3,739,636	-		Sama_3151	0.71	+1.1
3,739,636	-		Sama_3151	0.71	-0.8
3,739,636	-		Sama_3151	0.71	-0.4
3,739,654	+		Sama_3151	0.73	-0.2
3,739,654	+		Sama_3151	0.73	-1.0
3,739,654	+		Sama_3151	0.73	+1.3
3,739,655	-		Sama_3151	0.73	+0.7
3,739,655	-		Sama_3151	0.73	+0.9
3,739,655	-		Sama_3151	0.73	-1.3
3,739,705	+		Sama_3151	0.79	+2.3
3,739,705	+		Sama_3151	0.79	+0.1
3,739,761	-		Sama_3151	0.85	-0.5
3,739,761	-		Sama_3151	0.85	+0.7
3,739,778	+		Sama_3151	0.87	+0.1
3,739,790	+		Sama_3151	0.88	+0.3
3,739,790	+		Sama_3151	0.88	+0.4
3,739,790	+		Sama_3151	0.88	-0.3
3,739,791	-		Sama_3151	0.88	-3.0
3,739,791	-		Sama_3151	0.88	-0.3
3,739,791	-		Sama_3151	0.88	+0.6
3,739,803	+		Sama_3151	0.90	-0.4
3,739,804	-		Sama_3151	0.90	+0.4
3,739,804	-		Sama_3151	0.90	-0.8
3,739,822	+				-0.4
3,739,822	+				-0.3
3,739,879	+				-1.0
3,739,880	-				+1.3
3,739,907	+				-0.7
3,739,907	+				+0.1
3,739,907	+				-1.3
3,739,907	+				+1.1
3,739,907	+				+0.6
3,739,907	+				-0.1
3,739,907	+				+0.2
3,739,908	-				+0.7
3,739,908	-				-1.1
3,739,908	-				+1.8
3,739,908	-				-1.4
3,739,908	-				-1.6
3,739,908	-				-0.0
3,739,908	-				+1.0
3,739,908	-				-1.0
3,739,908	-				-0.2
3,739,908	-				+1.9
3,739,908	-				-1.0
3,739,908	-				-0.5
3,739,908	-				+0.3
3,739,909	+				-1.0
3,739,909	+				+0.4
3,739,909	+				+0.1
3,739,909	+				+1.6
3,739,910	-				-0.4
3,739,938	+				+0.6
3,739,938	+				-0.6
3,739,938	+				-0.5
3,739,938	+				+2.0
3,739,938	+				+0.9
3,739,939	-				-1.6
3,739,939	-				-1.2
3,739,945	+				+4.1
3,739,945	+				-0.9
3,739,945	+				-1.4
3,739,946	-				-1.5
3,739,946	-				-0.6
3,739,947	+				+0.1
3,739,947	+				-0.7
3,739,947	+				-0.7
3,739,947	+				-0.9
3,739,947	+				-0.6
3,739,947	+				-1.2
3,739,947	+				-0.1
3,739,947	+				+1.0
3,739,947	+				-1.8
3,739,947	+				-0.3
3,739,947	+				-0.1
3,739,947	+				-0.9
3,739,947	+				-1.5
3,739,948	-				-0.9
3,739,948	-				+0.0
3,739,948	-				-0.6
3,739,948	-				+0.3
3,739,948	-				-0.0
3,739,948	-				+1.3
3,739,948	-				+0.0
3,739,948	-				-0.6
3,739,948	-				+0.2
3,739,948	-				-0.3
3,739,948	-				-1.1
3,739,948	-				+0.7
3,739,948	-				+0.2
3,739,948	-				-1.9
3,739,948	-				-0.9
3,739,991	-		Sama_3152	0.17	-0.4
3,740,061	+		Sama_3152	0.39	-0.4
3,740,061	+		Sama_3152	0.39	+0.4
3,740,061	+		Sama_3152	0.39	-1.0
3,740,061	+		Sama_3152	0.39	+0.1
3,740,061	+		Sama_3152	0.39	-0.0
3,740,061	+		Sama_3152	0.39	+0.2
3,740,062	-		Sama_3152	0.40	-0.5
3,740,062	-		Sama_3152	0.40	+0.1
3,740,062	-		Sama_3152	0.40	-0.4
3,740,062	-		Sama_3152	0.40	-0.6
3,740,062	-		Sama_3152	0.40	-0.9
3,740,062	-		Sama_3152	0.40	-0.6
3,740,062	-		Sama_3152	0.40	+1.1
3,740,062	-		Sama_3152	0.40	+2.3
3,740,062	-		Sama_3152	0.40	+0.4
3,740,062	-		Sama_3152	0.40	-1.3
3,740,063	+		Sama_3152	0.40	-0.2
3,740,063	+		Sama_3152	0.40	-1.1
3,740,063	+		Sama_3152	0.40	-0.5
3,740,063	+		Sama_3152	0.40	-3.1
3,740,063	+		Sama_3152	0.40	-0.6
3,740,063	+		Sama_3152	0.40	+1.1
3,740,063	+		Sama_3152	0.40	-0.1
3,740,063	+		Sama_3152	0.40	+1.3
3,740,063	+		Sama_3152	0.40	-0.4
3,740,063	+		Sama_3152	0.40	+1.3
3,740,063	+		Sama_3152	0.40	-0.8
3,740,063	+		Sama_3152	0.40	-0.3
3,740,063	+		Sama_3152	0.40	-0.8
3,740,063	+		Sama_3152	0.40	-0.4
3,740,063	+		Sama_3152	0.40	-0.1
3,740,063	+		Sama_3152	0.40	-0.9
3,740,064	-		Sama_3152	0.40	+1.3
3,740,064	-		Sama_3152	0.40	-0.9
3,740,064	-		Sama_3152	0.40	+0.3
3,740,064	-		Sama_3152	0.40	+0.3
3,740,064	-		Sama_3152	0.40	-0.8
3,740,064	-		Sama_3152	0.40	-1.6
3,740,064	-		Sama_3152	0.40	-1.2
3,740,064	-		Sama_3152	0.40	-0.3
3,740,064	-		Sama_3152	0.40	-0.7
3,740,064	-		Sama_3152	0.40	+0.3
3,740,064	-		Sama_3152	0.40	-1.1
3,740,064	-		Sama_3152	0.40	-0.4
3,740,064	-		Sama_3152	0.40	-0.7
3,740,113	+		Sama_3152	0.56	-1.9
3,740,113	+		Sama_3152	0.56	-0.9
3,740,114	-		Sama_3152	0.57	+0.3
3,740,162	+		Sama_3152	0.72	-0.1
3,740,190	-		Sama_3152	0.81	-0.0
3,740,190	-		Sama_3152	0.81	-0.2
3,740,193	+		Sama_3152	0.82	-1.2
3,740,193	+		Sama_3152	0.82	+0.4
3,740,193	+		Sama_3152	0.82	-0.7
3,740,204	+		Sama_3152	0.86	+0.2
3,740,204	+		Sama_3152	0.86	-1.0
3,740,241	+				-0.7
3,740,245	+				-0.7
3,740,245	+				-0.4
3,740,245	+				-0.2
3,740,246	-				-1.3
3,740,246	-				+0.3
3,740,246	-				+1.1
3,740,246	-				+0.5
3,740,246	-				-0.7
3,740,266	+				+0.8
3,740,267	-				-1.4
3,740,267	-				-1.1
3,740,277	+				+0.8
3,740,277	+				+0.4
3,740,277	+				-0.2
3,740,277	+				-0.3
3,740,278	-				-2.1
3,740,278	-				-0.2
3,740,322	+				-0.8
3,740,323	-				-1.2
3,740,328	+				-1.6
3,740,329	-				-1.4
3,740,329	-				-1.2
3,740,367	+				+1.6
3,740,367	+				+0.7
3,740,367	+				-0.0
3,740,367	+				-0.3
3,740,367	+				-0.4
3,740,367	+				+1.1
3,740,367	+				-0.3
3,740,368	-				-0.4
3,740,368	-				-1.0
3,740,368	-				-0.4
3,740,368	-				+1.4
3,740,368	-				-0.9
3,740,457	+				+0.4
3,740,457	+				-0.4
3,740,457	+				+0.7
3,740,457	+				-1.6
3,740,457	+				-1.0
3,740,457	+				+0.2
3,740,458	-				-1.4
3,740,458	-				+0.6
3,740,458	-				-0.4
3,740,458	-				-0.2
3,740,458	-				+0.0
3,740,458	-				+0.9
3,740,459	+				+1.1
3,740,459	+				-0.8
3,740,459	+				+0.3
3,740,459	+				+1.4
3,740,581	+		Sama_3153	0.15	-0.7
3,740,581	+		Sama_3153	0.15	+0.6
3,740,662	-		Sama_3153	0.20	+0.7
3,740,662	-		Sama_3153	0.20	-0.2
3,740,688	+		Sama_3153	0.22	-1.2
3,740,688	+		Sama_3153	0.22	-0.2
3,740,689	-		Sama_3153	0.22	-0.4
3,740,689	-		Sama_3153	0.22	-0.1
3,740,689	-		Sama_3153	0.22	-2.1
3,740,792	+		Sama_3153	0.28	+1.2
3,740,792	+		Sama_3153	0.28	-1.3
3,740,793	-		Sama_3153	0.28	-0.9
3,740,831	+		Sama_3153	0.30	-0.1
3,740,831	+		Sama_3153	0.30	-0.3
3,740,831	+		Sama_3153	0.30	-0.9
3,740,832	-		Sama_3153	0.30	-0.2
3,740,832	-		Sama_3153	0.30	+0.0
3,740,895	+		Sama_3153	0.33	-2.1
3,740,895	+		Sama_3153	0.33	+0.6
3,740,895	+		Sama_3153	0.33	-0.1
3,740,895	+		Sama_3153	0.33	+0.1
3,740,895	+		Sama_3153	0.33	-0.6
3,740,896	-		Sama_3153	0.33	-2.5
3,740,896	-		Sama_3153	0.33	+0.3
3,740,938	+		Sama_3153	0.36	-0.0
3,740,952	+		Sama_3153	0.37	-0.2
3,740,952	+		Sama_3153	0.37	+0.2
3,740,953	-		Sama_3153	0.37	-0.9
3,740,953	-		Sama_3153	0.37	-0.1
3,740,953	-		Sama_3153	0.37	-1.3
3,740,976	+		Sama_3153	0.38	-0.4
3,740,977	-		Sama_3153	0.38	-0.9
3,740,977	-		Sama_3153	0.38	+0.3
3,740,977	-		Sama_3153	0.38	+0.8
3,740,999	+		Sama_3153	0.39	-1.1
3,740,999	+		Sama_3153	0.39	-2.2
3,740,999	+		Sama_3153	0.39	-0.6
3,740,999	+		Sama_3153	0.39	-0.3
3,740,999	+		Sama_3153	0.39	+0.9
3,740,999	+		Sama_3153	0.39	-0.3
3,741,000	-		Sama_3153	0.39	-2.9
3,741,000	-		Sama_3153	0.39	+2.9
3,741,000	-		Sama_3153	0.39	+0.6
3,741,000	-		Sama_3153	0.39	+0.2
3,741,000	-		Sama_3153	0.39	-0.4
3,741,000	-		Sama_3153	0.39	-0.0
3,741,000	-		Sama_3153	0.39	-0.6
3,741,000	-		Sama_3153	0.39	-0.3
3,741,092	-		Sama_3153	0.45	-1.0
3,741,092	-		Sama_3153	0.45	+0.9
3,741,101	+		Sama_3153	0.45	+0.5
3,741,101	+		Sama_3153	0.45	-1.3
3,741,101	+		Sama_3153	0.45	-0.6
3,741,101	+		Sama_3153	0.45	+0.2
3,741,102	-		Sama_3153	0.45	+1.0
3,741,102	-		Sama_3153	0.45	+0.1
3,741,102	-		Sama_3153	0.45	-0.8
3,741,102	-		Sama_3153	0.45	-0.5
3,741,102	-		Sama_3153	0.45	-1.0
3,741,102	-		Sama_3153	0.45	-1.1
3,741,102	-		Sama_3153	0.45	+0.3
3,741,102	-		Sama_3153	0.45	-1.7
3,741,104	-		Sama_3153	0.45	-0.9
3,741,144	+		Sama_3153	0.48	+1.9
3,741,216	+		Sama_3153	0.52	+0.8
3,741,216	+		Sama_3153	0.52	+0.7
3,741,216	+		Sama_3153	0.52	+1.5
3,741,217	-		Sama_3153	0.52	-0.6
3,741,217	-		Sama_3153	0.52	-0.1
3,741,217	-		Sama_3153	0.52	-0.7
3,741,217	-		Sama_3153	0.52	-0.4