Strain Fitness in Shewanella amazonensis SB2B around Sama_2771

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
3,310,018	+		Sama_2769	0.27	+0.1
3,310,019	-		Sama_2769	0.27	-0.3
3,310,019	-		Sama_2769	0.27	+0.6
3,310,019	-		Sama_2769	0.27	-1.8
3,310,019	-		Sama_2769	0.27	-1.4
3,310,027	+		Sama_2769	0.30	-0.0
3,310,028	-		Sama_2769	0.30	-0.6
3,310,028	-		Sama_2769	0.30	+0.2
3,310,050	+		Sama_2769	0.37	-1.7
3,310,051	-		Sama_2769	0.38	-0.2
3,310,051	-		Sama_2769	0.38	-1.3
3,310,051	-		Sama_2769	0.38	-0.5
3,310,051	-		Sama_2769	0.38	-0.9
3,310,051	-		Sama_2769	0.38	-0.7
3,310,051	-		Sama_2769	0.38	-0.7
3,310,051	-		Sama_2769	0.38	-2.4
3,310,079	+		Sama_2769	0.47	-1.9
3,310,080	-		Sama_2769	0.47	+0.5
3,310,084	+		Sama_2769	0.48	-0.1
3,310,084	+		Sama_2769	0.48	-0.6
3,310,084	+		Sama_2769	0.48	-1.0
3,310,084	+		Sama_2769	0.48	-0.4
3,310,084	+		Sama_2769	0.48	-0.3
3,310,085	-		Sama_2769	0.49	-0.7
3,310,085	-		Sama_2769	0.49	-1.3
3,310,171	+		Sama_2769	0.77	-0.7
3,310,171	+		Sama_2769	0.77	-0.7
3,310,172	-		Sama_2769	0.77	-0.2
3,310,173	+		Sama_2769	0.77	-2.1
3,310,173	+		Sama_2769	0.77	-2.1
3,310,174	-		Sama_2769	0.78	-0.6
3,310,174	-		Sama_2769	0.78	-0.7
3,310,181	+		Sama_2769	0.80	+1.4
3,310,181	+		Sama_2769	0.80	+0.0
3,310,200	-		Sama_2769	0.86	+0.6
3,310,264	+				+0.5
3,310,264	+				+0.0
3,310,264	+				+3.0
3,310,265	-				-0.3
3,310,265	-				-0.8
3,310,265	-				+1.2
3,310,265	-				-0.5
3,310,276	+				-0.0
3,310,277	-				-0.1
3,310,277	-				+0.4
3,310,277	-				-0.6
3,310,277	-				+1.1
3,310,280	+				-0.1
3,310,280	+				+0.5
3,310,280	+				+1.3
3,310,280	+				-0.8
3,310,280	+				+0.4
3,310,280	+				+0.5
3,310,280	+				+2.6
3,310,280	+				+0.1
3,310,280	+				-0.3
3,310,280	+				+0.2
3,310,280	+				+0.7
3,310,280	+				-0.3
3,310,280	+				+0.4
3,310,280	+				-0.8
3,310,280	+				+0.3
3,310,280	+				-1.3
3,310,280	+				-0.2
3,310,280	+				+0.1
3,310,280	+				+0.9
3,310,280	+				-1.3
3,310,281	-				+0.3
3,310,281	-				-0.7
3,310,281	-				+0.8
3,310,281	-				+1.7
3,310,281	-				+0.9
3,310,281	-				-0.3
3,310,281	-				+1.2
3,310,281	-				-0.6
3,310,281	-				-0.3
3,310,281	-				-0.1
3,310,281	-				+1.3
3,310,281	-				-1.1
3,310,281	-				-0.6
3,310,281	-				+0.8
3,310,281	-				-0.1
3,310,281	-				-0.7
3,310,281	-				+0.5
3,310,286	+				+0.1
3,310,286	+				+0.7
3,310,286	+				-0.3
3,310,287	-				-0.3
3,310,330	+				-0.4
3,310,360	+				-2.0
3,310,360	+				+0.4
3,310,361	-				+0.3
3,310,361	-				-0.2
3,310,361	-				+1.7
3,310,433	-				+0.2
3,310,440	+				+0.1
3,310,440	+				+0.5
3,310,451	+				+0.9
3,310,451	+				+1.1
3,310,451	+				+0.3
3,310,452	-				-1.2
3,310,452	-				-1.1
3,310,452	-				+0.1
3,310,452	-				+0.5
3,310,456	+				+0.6
3,310,456	+				-1.5
3,310,474	-				-0.0
3,310,495	+				-0.7
3,310,495	+				-0.9
3,310,495	+				-1.4
3,310,495	+				+1.2
3,310,495	+				+0.2
3,310,495	+				-0.4
3,310,496	-				-0.6
3,310,496	-				-0.0
3,310,496	-				-0.1
3,310,496	-				-2.4
3,310,496	-				+0.0
3,310,496	-				-1.8
3,310,496	-				+0.1
3,310,496	-				+0.5
3,310,519	+				+0.7
3,310,520	-				-1.0
3,310,527	-				+0.1
3,310,538	+		Sama_2770	0.11	+0.2
3,310,570	+		Sama_2770	0.18	-0.2
3,310,571	-		Sama_2770	0.18	+0.9
3,310,639	-		Sama_2770	0.33	-0.6
3,310,639	-		Sama_2770	0.33	-0.8
3,310,719	+		Sama_2770	0.51	+1.5
3,310,719	+		Sama_2770	0.51	+0.1
3,310,719	+		Sama_2770	0.51	+0.2
3,310,719	+		Sama_2770	0.51	+1.0
3,310,720	-		Sama_2770	0.51	-0.6
3,310,720	-		Sama_2770	0.51	-1.2
3,310,723	-		Sama_2770	0.52	+0.3
3,310,740	+		Sama_2770	0.56	+0.9
3,310,740	+		Sama_2770	0.56	-0.3
3,310,740	+		Sama_2770	0.56	-1.1
3,310,740	+		Sama_2770	0.56	+0.1
3,310,740	+		Sama_2770	0.56	-0.6
3,310,740	+		Sama_2770	0.56	-0.5
3,310,740	+		Sama_2770	0.56	-0.9
3,310,740	+		Sama_2770	0.56	-0.4
3,310,740	+		Sama_2770	0.56	-0.5
3,310,740	+		Sama_2770	0.56	+0.9
3,310,741	-		Sama_2770	0.56	-1.3
3,310,741	-		Sama_2770	0.56	+0.1
3,310,741	-		Sama_2770	0.56	-0.5
3,310,741	-		Sama_2770	0.56	+0.3
3,310,741	-		Sama_2770	0.56	-0.5
3,310,741	-		Sama_2770	0.56	-0.9
3,310,741	-		Sama_2770	0.56	-1.1
3,310,742	+		Sama_2770	0.56	-0.5
3,310,743	-		Sama_2770	0.56	+0.9
3,310,743	-		Sama_2770	0.56	-0.1
3,310,743	-		Sama_2770	0.56	+0.1
3,310,773	+		Sama_2770	0.63	-0.3
3,310,773	+		Sama_2770	0.63	+0.7
3,310,774	-		Sama_2770	0.63	-0.5
3,310,774	-		Sama_2770	0.63	-2.3
3,310,774	-		Sama_2770	0.63	+0.6
3,310,774	-		Sama_2770	0.63	-1.1
3,310,785	+		Sama_2770	0.66	-1.0
3,310,842	+		Sama_2770	0.78	-0.5
3,310,843	-		Sama_2770	0.78	-0.5
3,310,843	-		Sama_2770	0.78	-0.5
3,310,843	-		Sama_2770	0.78	+0.5
3,310,878	+		Sama_2770	0.86	+1.9
3,310,879	-		Sama_2770	0.86	-0.8
3,310,909	-				-0.2
3,310,909	-				-1.3
3,310,917	+				-1.3
3,310,917	+				+2.8
3,310,918	-				+0.9
3,310,955	+				-0.8
3,310,956	-				+2.0
3,310,959	+				-1.2
3,310,962	-				-0.0
3,311,049	+				-1.1
3,311,079	+				-0.8
3,311,079	+				+0.3
3,311,080	-				+0.2
3,311,080	-				-1.0
3,311,080	-				-0.9
3,311,080	-				-1.1
3,311,098	+				-0.3
3,311,179	+		Sama_2771	0.13	+1.0
3,311,179	+		Sama_2771	0.13	-0.8
3,311,179	+		Sama_2771	0.13	-1.6
3,311,179	+		Sama_2771	0.13	-1.8
3,311,180	-		Sama_2771	0.13	+1.3
3,311,180	-		Sama_2771	0.13	-0.3
3,311,180	-		Sama_2771	0.13	+0.4
3,311,180	-		Sama_2771	0.13	-1.8
3,311,239	+		Sama_2771	0.18	-0.8
3,311,240	-		Sama_2771	0.18	-0.2
3,311,266	+		Sama_2771	0.19	+0.4
3,311,266	+		Sama_2771	0.19	-0.1
3,311,266	+		Sama_2771	0.19	+0.2
3,311,266	+		Sama_2771	0.19	+0.2
3,311,267	-		Sama_2771	0.20	-0.1
3,311,267	-		Sama_2771	0.20	-1.2
3,311,267	-		Sama_2771	0.20	+0.5
3,311,372	-		Sama_2771	0.27	-0.2
3,311,380	+		Sama_2771	0.28	+1.3
3,311,381	-		Sama_2771	0.28	-0.1
3,311,386	+		Sama_2771	0.28	-0.3
3,311,386	+		Sama_2771	0.28	-3.0
3,311,386	+		Sama_2771	0.28	-0.4
3,311,386	+		Sama_2771	0.28	+1.1
3,311,386	+		Sama_2771	0.28	-1.0
3,311,387	-		Sama_2771	0.28	-1.1
3,311,387	-		Sama_2771	0.28	+2.5
3,311,388	+		Sama_2771	0.28	-1.4
3,311,389	-		Sama_2771	0.28	+0.1
3,311,389	-		Sama_2771	0.28	-0.4
3,311,389	-		Sama_2771	0.28	+1.0
3,311,389	-		Sama_2771	0.28	-1.3
3,311,455	+		Sama_2771	0.33	-0.6
3,311,455	+		Sama_2771	0.33	-0.9
3,311,470	-		Sama_2771	0.34	+0.7
3,311,488	+		Sama_2771	0.35	+1.0
3,311,488	+		Sama_2771	0.35	+1.5
3,311,488	+		Sama_2771	0.35	-0.1
3,311,489	-		Sama_2771	0.35	+0.2
3,311,489	-		Sama_2771	0.35	-0.7
3,311,491	+		Sama_2771	0.36	-0.2
3,311,552	+		Sama_2771	0.40	-0.5
3,311,731	+		Sama_2771	0.53	-0.5
3,311,752	+		Sama_2771	0.54	+0.9
3,311,752	+		Sama_2771	0.54	-0.9
3,311,752	+		Sama_2771	0.54	-0.2
3,311,752	+		Sama_2771	0.54	+0.3
3,311,752	+		Sama_2771	0.54	+0.7
3,311,752	+		Sama_2771	0.54	-0.6
3,311,752	+		Sama_2771	0.54	-1.1
3,311,752	+		Sama_2771	0.54	-0.1
3,311,753	-		Sama_2771	0.54	+0.5
3,311,753	-		Sama_2771	0.54	-0.7
3,311,753	-		Sama_2771	0.54	-0.1
3,311,753	-		Sama_2771	0.54	-1.0
3,311,753	-		Sama_2771	0.54	-0.6
3,311,753	-		Sama_2771	0.54	-0.8
3,311,753	-		Sama_2771	0.54	+0.2
3,311,754	+		Sama_2771	0.54	+0.2
3,311,755	-		Sama_2771	0.55	-1.8
3,311,755	-		Sama_2771	0.55	-1.4
3,311,755	-		Sama_2771	0.55	-0.6
3,311,755	-		Sama_2771	0.55	-1.3
3,311,797	+		Sama_2771	0.58	+0.5
3,311,797	+		Sama_2771	0.58	-0.6
3,311,797	+		Sama_2771	0.58	+0.1
3,311,825	+		Sama_2771	0.60	+0.4
3,311,825	+		Sama_2771	0.60	-0.4
3,311,825	+		Sama_2771	0.60	+0.1
3,311,826	-		Sama_2771	0.60	+0.3
3,311,826	-		Sama_2771	0.60	-0.4
3,311,826	-		Sama_2771	0.60	-0.5
3,311,826	-		Sama_2771	0.60	+0.4
3,311,826	-		Sama_2771	0.60	-1.2
3,311,927	+		Sama_2771	0.67	-0.5
3,311,927	+		Sama_2771	0.67	-0.4
3,311,927	+		Sama_2771	0.67	-1.7
3,311,927	+		Sama_2771	0.67	-1.9
3,311,927	+		Sama_2771	0.67	-0.0
3,311,927	+		Sama_2771	0.67	-2.1
3,311,928	-		Sama_2771	0.67	+0.3
3,311,928	-		Sama_2771	0.67	+0.9
3,311,928	-		Sama_2771	0.67	+0.1
3,311,928	-		Sama_2771	0.67	-1.2
3,311,928	-		Sama_2771	0.67	+0.6
3,311,928	-		Sama_2771	0.67	-1.1
3,311,928	-		Sama_2771	0.67	+1.1
3,311,928	-		Sama_2771	0.67	-0.1
3,311,934	+		Sama_2771	0.67	-0.9
3,311,934	+		Sama_2771	0.67	+0.1
3,311,935	-		Sama_2771	0.67	-0.7
3,311,935	-		Sama_2771	0.67	+0.5
3,311,935	-		Sama_2771	0.67	-0.9
3,311,937	+		Sama_2771	0.68	+0.4
3,311,937	+		Sama_2771	0.68	+1.3
3,311,937	+		Sama_2771	0.68	-0.7
3,311,937	+		Sama_2771	0.68	+0.7
3,311,937	+		Sama_2771	0.68	-0.9
3,311,937	+		Sama_2771	0.68	-0.2
3,311,937	+		Sama_2771	0.68	-0.3
3,311,938	-		Sama_2771	0.68	+2.2
3,311,938	-		Sama_2771	0.68	-0.7
3,311,938	-		Sama_2771	0.68	-1.1
3,311,938	-		Sama_2771	0.68	+0.1
3,311,938	-		Sama_2771	0.68	+0.1
3,311,938	-		Sama_2771	0.68	+0.5
3,311,938	-		Sama_2771	0.68	+0.1
3,311,938	-		Sama_2771	0.68	+0.5
3,312,098	+		Sama_2771	0.79	-1.2
3,312,099	-		Sama_2771	0.79	-0.5
3,312,121	+		Sama_2771	0.81	-2.7
3,312,121	+		Sama_2771	0.81	-1.8
3,312,122	-		Sama_2771	0.81	+0.9
3,312,122	-		Sama_2771	0.81	+0.1
3,312,210	+		Sama_2771	0.87	+0.3
3,312,210	+		Sama_2771	0.87	-0.3
3,312,210	+		Sama_2771	0.87	-0.0
3,312,251	-				-1.0
3,312,251	-				+0.3
3,312,256	+				-0.6
3,312,256	+				-1.3
3,312,256	+				+0.2
3,312,257	-				+0.0
3,312,336	+				+1.3
3,312,336	+				-2.3
3,312,337	-				-2.6
3,312,337	-				+0.1
3,312,337	-				-0.6
3,312,337	-				-0.1
3,312,340	+				-0.3
3,312,340	+				-1.3
3,312,372	+				-2.1
3,312,372	+				+1.1
3,312,372	+				-0.3
3,312,447	+				+0.8
3,312,470	+				-0.9
3,312,470	+				-0.9
3,312,470	+				+1.3
3,312,471	-				-0.4
3,312,471	-				+0.3
3,312,491	-				-0.6
3,312,514	+				-1.7
3,312,523	+				+0.2
3,312,524	-				-0.5
3,312,524	-				-0.9
3,312,524	-				-0.9
3,312,524	-				-0.2
3,312,524	-				+1.8
3,312,524	-				-0.8
3,312,524	-				-0.4
3,312,524	-				-1.1
3,312,524	-				-1.5
3,312,539	-				+1.6
3,312,590	+		Sama_2772	0.14	+0.5
3,312,599	+		Sama_2772	0.15	-0.3
3,312,632	+		Sama_2772	0.17	-0.9
3,312,632	+		Sama_2772	0.17	-0.3
3,312,632	+		Sama_2772	0.17	+0.4
3,312,632	+		Sama_2772	0.17	-2.5
3,312,632	+		Sama_2772	0.17	-1.1
3,312,632	+		Sama_2772	0.17	+2.5
3,312,633	-		Sama_2772	0.17	-1.0
3,312,633	-		Sama_2772	0.17	+0.7
3,312,633	-		Sama_2772	0.17	-0.7
3,312,677	+		Sama_2772	0.20	-0.8
3,312,677	+		Sama_2772	0.20	-0.3
3,312,677	+		Sama_2772	0.20	+1.4
3,312,677	+		Sama_2772	0.20	+0.7
3,312,683	+		Sama_2772	0.21	+0.7
3,312,684	-		Sama_2772	0.21	-0.8
3,312,704	+		Sama_2772	0.22	-0.6
3,312,705	-		Sama_2772	0.23	-0.8
3,312,705	-		Sama_2772	0.23	-1.8
3,312,716	+		Sama_2772	0.23	-0.7
3,312,716	+		Sama_2772	0.23	-0.4
3,312,717	-		Sama_2772	0.23	-1.2
3,312,717	-		Sama_2772	0.23	-1.6
3,312,736	+		Sama_2772	0.25	+1.8
3,312,736	+		Sama_2772	0.25	-0.6
3,312,736	+		Sama_2772	0.25	-1.7
3,312,737	-		Sama_2772	0.25	-0.5
3,312,737	-		Sama_2772	0.25	+0.5
3,312,737	-		Sama_2772	0.25	-1.6
3,312,759	+		Sama_2772	0.27	-1.4
3,312,760	-		Sama_2772	0.27	-1.2
3,312,760	-		Sama_2772	0.27	-0.3
3,312,790	+		Sama_2772	0.29	+0.6
3,312,790	+		Sama_2772	0.29	-0.2
3,312,790	+		Sama_2772	0.29	+0.1
3,312,790	+		Sama_2772	0.29	-0.9
3,312,791	-		Sama_2772	0.29	-1.2
3,312,791	-		Sama_2772	0.29	-1.6
3,312,791	-		Sama_2772	0.29	-0.4
3,312,791	-		Sama_2772	0.29	-0.7
3,312,791	-		Sama_2772	0.29	-1.7
3,312,992	+		Sama_2772	0.44	+0.1
3,312,992	+		Sama_2772	0.44	-1.4
3,312,993	-		Sama_2772	0.44	-0.1
3,312,993	-		Sama_2772	0.44	-0.1
3,313,055	+		Sama_2772	0.49	+0.6
3,313,105	-		Sama_2772	0.53	-0.7
3,313,124	+		Sama_2772	0.54	-2.2
3,313,125	-		Sama_2772	0.54	-0.4
3,313,135	+		Sama_2772	0.55	-1.1
3,313,136	-		Sama_2772	0.55	-1.3
3,313,136	-		Sama_2772	0.55	-0.5
3,313,145	+		Sama_2772	0.56	-1.3
3,313,145	+		Sama_2772	0.56	-0.4
3,313,145	+		Sama_2772	0.56	-1.0
3,313,146	-		Sama_2772	0.56	+0.7
3,313,146	-		Sama_2772	0.56	+0.3
3,313,146	-		Sama_2772	0.56	-0.3
3,313,146	-		Sama_2772	0.56	+0.2
3,313,146	-		Sama_2772	0.56	+0.4
3,313,200	+		Sama_2772	0.60	+0.7
3,313,200	+		Sama_2772	0.60	+0.6
3,313,200	+		Sama_2772	0.60	-0.4
3,313,200	+		Sama_2772	0.60	+0.5
3,313,200	+		Sama_2772	0.60	-0.4
3,313,201	-		Sama_2772	0.60	+0.8
3,313,201	-		Sama_2772	0.60	-0.5
3,313,201	-		Sama_2772	0.60	+2.1
3,313,201	-		Sama_2772	0.60	-0.7
3,313,241	+		Sama_2772	0.63	-1.0
3,313,241	+		Sama_2772	0.63	-2.0
3,313,241	+		Sama_2772	0.63	-1.9
3,313,241	+		Sama_2772	0.63	-0.6
3,313,242	-		Sama_2772	0.63	-0.5
3,313,242	-		Sama_2772	0.63	-0.4
3,313,242	-		Sama_2772	0.63	-1.5
3,313,242	-		Sama_2772	0.63	-0.7
3,313,242	-		Sama_2772	0.63	+0.7
3,313,245	+		Sama_2772	0.64	-1.2
3,313,245	+		Sama_2772	0.64	+0.1
3,313,245	+		Sama_2772	0.64	-0.4
3,313,245	+		Sama_2772	0.64	-0.9
3,313,246	-		Sama_2772	0.64	-0.2
3,313,246	-		Sama_2772	0.64	+1.7
3,313,246	-		Sama_2772	0.64	-0.4
3,313,298	+		Sama_2772	0.68	+0.5
3,313,298	+		Sama_2772	0.68	+1.9
3,313,299	-		Sama_2772	0.68	+0.3
3,313,319	+		Sama_2772	0.69	-1.3
3,313,319	+		Sama_2772	0.69	-1.2
3,313,319	+		Sama_2772	0.69	-0.5
3,313,320	-		Sama_2772	0.69	-0.5
3,313,333	+		Sama_2772	0.70	-0.7
3,313,333	+		Sama_2772	0.70	-0.6
3,313,333	+		Sama_2772	0.70	-0.5
3,313,333	+		Sama_2772	0.70	-0.4
3,313,334	-		Sama_2772	0.70	+0.1
3,313,334	-		Sama_2772	0.70	-0.2
3,313,334	-		Sama_2772	0.70	+1.2
3,313,334	-		Sama_2772	0.70	-0.2
3,313,334	-		Sama_2772	0.70	-2.4
3,313,334	-		Sama_2772	0.70	-1.0
3,313,334	-		Sama_2772	0.70	+0.4
3,313,351	+		Sama_2772	0.72	-1.8
3,313,367	-		Sama_2772	0.73	+0.8
3,313,377	-		Sama_2772	0.74	-0.4
3,313,385	+		Sama_2772	0.74	-0.7
3,313,386	-		Sama_2772	0.74	-0.8