Strain Fitness in Shewanella amazonensis SB2B around Sama_2636

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
3,157,195	+		Sama_2635	0.71	-2.3
3,157,195	+		Sama_2635	0.71	-0.8
3,157,201	+		Sama_2635	0.72	+2.8
3,157,201	+		Sama_2635	0.72	+0.7
3,157,201	+		Sama_2635	0.72	-0.3
3,157,201	+		Sama_2635	0.72	+0.6
3,157,202	-		Sama_2635	0.72	-1.0
3,157,202	-		Sama_2635	0.72	+1.6
3,157,202	-		Sama_2635	0.72	+0.2
3,157,202	-		Sama_2635	0.72	-1.3
3,157,246	+		Sama_2635	0.74	-2.0
3,157,246	+		Sama_2635	0.74	-0.7
3,157,247	-		Sama_2635	0.74	-0.3
3,157,291	+		Sama_2635	0.76	-0.8
3,157,291	+		Sama_2635	0.76	+0.9
3,157,354	+		Sama_2635	0.79	+0.6
3,157,453	+		Sama_2635	0.83	+0.6
3,157,453	+		Sama_2635	0.83	-0.8
3,157,453	+		Sama_2635	0.83	-0.4
3,157,453	+		Sama_2635	0.83	-0.1
3,157,453	+		Sama_2635	0.83	-1.2
3,157,453	+		Sama_2635	0.83	+1.8
3,157,453	+		Sama_2635	0.83	+0.2
3,157,453	+		Sama_2635	0.83	-0.8
3,157,453	+		Sama_2635	0.83	+1.5
3,157,453	+		Sama_2635	0.83	-0.8
3,157,453	+		Sama_2635	0.83	-0.1
3,157,453	+		Sama_2635	0.83	+1.3
3,157,453	+		Sama_2635	0.83	+0.6
3,157,453	+		Sama_2635	0.83	-0.9
3,157,453	+		Sama_2635	0.83	-0.1
3,157,453	+		Sama_2635	0.83	-2.4
3,157,453	+		Sama_2635	0.83	+1.8
3,157,453	+		Sama_2635	0.83	+0.2
3,157,453	+		Sama_2635	0.83	-0.2
3,157,453	+		Sama_2635	0.83	-0.8
3,157,453	+		Sama_2635	0.83	-0.2
3,157,453	+		Sama_2635	0.83	-0.6
3,157,454	-		Sama_2635	0.84	+0.2
3,157,454	-		Sama_2635	0.84	+1.2
3,157,454	-		Sama_2635	0.84	-0.4
3,157,454	-		Sama_2635	0.84	-1.2
3,157,454	-		Sama_2635	0.84	+0.0
3,157,454	-		Sama_2635	0.84	-0.2
3,157,454	-		Sama_2635	0.84	-0.6
3,157,454	-		Sama_2635	0.84	-0.1
3,157,454	-		Sama_2635	0.84	-0.6
3,157,454	-		Sama_2635	0.84	+0.5
3,157,454	-		Sama_2635	0.84	+0.7
3,157,454	-		Sama_2635	0.84	-0.6
3,157,454	-		Sama_2635	0.84	-0.4
3,157,454	-		Sama_2635	0.84	-0.5
3,157,454	-		Sama_2635	0.84	+0.7
3,157,454	-		Sama_2635	0.84	+1.4
3,157,454	-		Sama_2635	0.84	+0.4
3,157,568	-		Sama_2635	0.89	+0.2
3,157,574	+		Sama_2635	0.89	+1.5
3,157,574	+		Sama_2635	0.89	+0.1
3,157,575	-		Sama_2635	0.89	-1.1
3,157,575	-		Sama_2635	0.89	+0.5
3,157,580	-		Sama_2635	0.89	-0.2
3,157,592	+				-0.5
3,157,615	+				+0.4
3,157,615	+				-0.9
3,157,616	-				-1.0
3,157,616	-				+1.0
3,157,648	-				+0.0
3,157,648	-				-2.6
3,157,648	-				-0.5
3,157,722	-				-0.1
3,157,774	-				-0.8
3,157,832	-				+0.2
3,157,832	-				+0.5
3,157,832	-				+0.2
3,157,835	+				+0.2
3,157,835	+				+0.1
3,157,835	+				+1.4
3,157,835	+				-0.7
3,157,835	+				-0.8
3,157,835	+				+1.2
3,157,835	+				-0.4
3,157,840	+				+1.0
3,157,845	+				-2.8
3,157,845	+				-2.1
3,157,845	+				-0.4
3,157,845	+				-0.2
3,157,845	+				-0.8
3,157,845	+				-1.5
3,157,845	+				+0.6
3,157,846	-				-0.8
3,157,846	-				-2.0
3,157,846	-				+0.0
3,157,855	+				-0.2
3,157,855	+				+0.3
3,157,855	+				-1.1
3,157,856	-				-1.1
3,157,856	-				+0.0
3,157,856	-				+2.1
3,157,857	+				+1.2
3,157,857	+				-0.4
3,157,857	+				-0.8
3,157,857	+				+0.7
3,157,857	+				-0.4
3,157,857	+				+0.8
3,157,857	+				+0.7
3,157,857	+				-0.4
3,157,857	+				+0.2
3,157,857	+				-1.0
3,157,858	-				-0.1
3,157,858	-				-1.9
3,157,858	-				-0.5
3,157,858	-				-0.7
3,157,858	-				+1.0
3,157,858	-				-1.4
3,157,858	-				-1.7
3,157,864	+				-0.2
3,157,931	-				-1.9
3,157,931	-				-1.6
3,157,931	-				+0.3
3,157,934	+				-1.4
3,157,935	-				-1.0
3,158,035	+				-0.2
3,158,036	-				-0.1
3,158,058	-		Sama_2636	0.10	+0.8
3,158,098	+		Sama_2636	0.13	+1.1
3,158,099	-		Sama_2636	0.13	+1.8
3,158,311	+		Sama_2636	0.30	-0.8
3,158,312	-		Sama_2636	0.30	+0.4
3,158,412	-		Sama_2636	0.38	+1.1
3,158,412	-		Sama_2636	0.38	+1.6
3,158,412	-		Sama_2636	0.38	+4.6
3,158,414	+		Sama_2636	0.38	-0.9
3,158,415	-		Sama_2636	0.38	+2.0
3,158,417	+		Sama_2636	0.38	-0.8
3,158,417	+		Sama_2636	0.38	+3.4
3,158,418	-		Sama_2636	0.38	+0.9
3,158,418	-		Sama_2636	0.38	-1.4
3,158,541	-		Sama_2636	0.48	+1.6
3,158,561	-		Sama_2636	0.49	-1.4
3,158,735	+		Sama_2636	0.63	+1.8
3,158,735	+		Sama_2636	0.63	-0.5
3,158,735	+		Sama_2636	0.63	+0.9
3,158,735	+		Sama_2636	0.63	+0.7
3,158,741	-		Sama_2636	0.64	+0.1
3,158,741	-		Sama_2636	0.64	+0.1
3,158,741	-		Sama_2636	0.64	+0.9
3,158,791	+		Sama_2636	0.67	+2.1
3,158,801	+		Sama_2636	0.68	-0.5
3,158,802	-		Sama_2636	0.68	+1.3
3,158,846	+		Sama_2636	0.72	+1.6
3,158,846	+		Sama_2636	0.72	+0.5
3,158,880	-		Sama_2636	0.74	+2.0
3,158,947	+		Sama_2636	0.80	+0.2
3,158,947	+		Sama_2636	0.80	+1.9
3,158,947	+		Sama_2636	0.80	+2.0
3,158,947	+		Sama_2636	0.80	+1.6
3,158,948	-		Sama_2636	0.80	+5.4
3,158,956	+		Sama_2636	0.80	-0.6
3,158,956	+		Sama_2636	0.80	-0.5
3,158,957	-		Sama_2636	0.80	+3.8
3,158,969	+		Sama_2636	0.81	-0.0
3,158,969	+		Sama_2636	0.81	+0.5
3,158,969	+		Sama_2636	0.81	+1.6
3,158,970	-		Sama_2636	0.81	-0.1
3,158,970	-		Sama_2636	0.81	+1.1
3,158,970	-		Sama_2636	0.81	+4.6
3,158,970	-		Sama_2636	0.81	+0.3
3,158,970	-		Sama_2636	0.81	-0.1
3,159,018	+		Sama_2636	0.85	+1.6
3,159,019	-		Sama_2636	0.85	+0.8
3,159,019	-		Sama_2636	0.85	+0.1
3,159,074	+		Sama_2636	0.90	-0.4
3,159,074	+		Sama_2636	0.90	+0.8
3,159,076	+		Sama_2636	0.90	+0.6
3,159,076	+		Sama_2636	0.90	+1.1
3,159,077	-		Sama_2636	0.90	+0.3
3,159,077	-		Sama_2636	0.90	+1.5
3,159,077	-		Sama_2636	0.90	+4.1
3,159,077	-		Sama_2636	0.90	+1.4
3,159,099	+				+0.5
3,159,131	+				+0.7
3,159,206	+				+1.0
3,159,207	-				-0.6
3,159,207	-				-0.8
3,159,207	-				+0.8
3,159,207	-				+1.8
3,159,211	+				+1.9
3,159,211	+				+0.2
3,159,212	-				-0.6
3,159,212	-				+1.1
3,159,212	-				+0.3
3,159,245	+				-2.6
3,159,245	+				+1.9
3,159,245	+				-3.2
3,159,245	+				+1.4
3,159,245	+				-1.2
3,159,245	+				-0.2
3,159,246	-				-2.0
3,159,246	-				-0.6
3,159,246	-				+1.9
3,159,246	-				-2.5
3,159,246	-				-0.2
3,159,246	-				-1.4
3,159,246	-				-1.4
3,159,246	-				+0.1
3,159,246	-				-1.7
3,159,246	-				-1.5
3,159,246	-				-0.5
3,159,246	-				-2.9
3,159,246	-				-2.9
3,159,246	-				-1.4
3,159,246	-				+1.2
3,159,247	+				+2.8
3,159,247	+				+0.3
3,159,247	+				+3.6
3,159,247	+				-1.5
3,159,247	+				-0.1
3,159,247	+				-0.2
3,159,247	+				+1.8
3,159,248	-				-1.2
3,159,248	-				+1.0
3,159,248	-				-1.0
3,159,248	-				+1.6
3,159,248	-				+1.6
3,159,248	-				-0.9
3,159,248	-				-1.9
3,159,248	-				-1.6
3,159,258	+				-1.5
3,159,259	-				-0.3
3,159,262	+				-1.3
3,159,262	+				+0.1
3,159,262	+				-2.5
3,159,263	-				-1.0
3,159,263	-				-2.0
3,159,263	-				-1.1
3,159,263	-				-1.3
3,159,277	+				+0.0
3,159,277	+				-1.9
3,159,277	+				+0.3
3,159,277	+				-1.2
3,159,277	+				-2.5
3,159,278	-				-2.6
3,159,278	-				-2.7
3,159,278	-				-2.5
3,159,278	-				+0.1
3,159,278	-				-0.5
3,159,278	-				-2.5
3,159,278	-				-1.1
3,159,344	+				-1.9
3,159,344	+				+1.0
3,159,345	-				-1.0
3,159,345	-				-2.4
3,159,354	-				+0.0
3,159,374	-		Sama_2637	0.10	+0.8
3,159,401	+		Sama_2637	0.12	-2.7
3,159,421	+		Sama_2637	0.13	-0.6
3,159,421	+		Sama_2637	0.13	-0.6
3,159,421	+		Sama_2637	0.13	-0.2
3,159,421	+		Sama_2637	0.13	-1.6
3,159,422	-		Sama_2637	0.13	+1.3
3,159,422	-		Sama_2637	0.13	-1.6
3,159,427	+		Sama_2637	0.14	-1.3
3,159,427	+		Sama_2637	0.14	-3.1
3,159,428	-		Sama_2637	0.14	-1.7
3,159,651	+		Sama_2637	0.29	-2.5
3,159,652	-		Sama_2637	0.29	-1.9
3,159,677	+		Sama_2637	0.31	-0.8
3,159,722	+		Sama_2637	0.34	-2.2
3,159,723	-		Sama_2637	0.34	+0.4
3,159,723	-		Sama_2637	0.34	-2.6
3,159,766	+		Sama_2637	0.37	+2.8
3,159,766	+		Sama_2637	0.37	-2.0
3,159,766	+		Sama_2637	0.37	-1.3
3,159,766	+		Sama_2637	0.37	-2.0
3,159,766	+		Sama_2637	0.37	-1.2
3,159,767	-		Sama_2637	0.37	-0.9
3,159,767	-		Sama_2637	0.37	-0.3
3,159,767	-		Sama_2637	0.37	-2.3
3,159,767	-		Sama_2637	0.37	-3.6
3,159,767	-		Sama_2637	0.37	-0.2
3,159,767	-		Sama_2637	0.37	-2.8
3,159,767	-		Sama_2637	0.37	-0.5
3,159,767	-		Sama_2637	0.37	-2.0
3,159,784	+		Sama_2637	0.39	-2.6
3,159,784	+		Sama_2637	0.39	-1.6
3,159,784	+		Sama_2637	0.39	-1.8
3,159,784	+		Sama_2637	0.39	-1.5
3,159,785	-		Sama_2637	0.39	-0.5
3,159,785	-		Sama_2637	0.39	-1.0
3,159,785	-		Sama_2637	0.39	+2.6
3,159,785	-		Sama_2637	0.39	-1.3
3,159,785	-		Sama_2637	0.39	-0.2
3,159,785	-		Sama_2637	0.39	-2.6
3,159,785	-		Sama_2637	0.39	-3.5
3,159,956	+		Sama_2637	0.50	-2.7
3,159,956	+		Sama_2637	0.50	+1.8
3,159,957	-		Sama_2637	0.51	+0.5
3,159,957	-		Sama_2637	0.51	-2.7
3,160,056	+		Sama_2637	0.57	+2.1
3,160,057	-		Sama_2637	0.57	-1.7
3,160,138	-		Sama_2637	0.63	-2.8
3,160,138	-		Sama_2637	0.63	-1.9
3,160,138	-		Sama_2637	0.63	-1.9