Strain Fitness in Shewanella amazonensis SB2B around Sama_1206

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
1,477,836	+		Sama_1205	0.39	-0.9
1,477,972	+		Sama_1205	0.51	+0.3
1,477,973	-		Sama_1205	0.51	-0.6
1,478,127	+		Sama_1205	0.65	+0.2
1,478,152	-		Sama_1205	0.67	-1.6
1,478,152	-		Sama_1205	0.67	-0.7
1,478,168	+		Sama_1205	0.69	+1.0
1,478,168	+		Sama_1205	0.69	-0.7
1,478,169	-		Sama_1205	0.69	-1.2
1,478,208	+		Sama_1205	0.73	-0.9
1,478,208	+		Sama_1205	0.73	-0.2
1,478,208	+		Sama_1205	0.73	-1.8
1,478,209	-		Sama_1205	0.73	-2.0
1,478,285	-		Sama_1205	0.80	+0.2
1,478,319	+		Sama_1205	0.83	+0.5
1,478,530	-				+0.3
1,478,541	-				-1.6
1,478,587	-				+0.1
1,478,587	-				-0.3
1,478,616	+				-0.2
1,478,617	-				-0.4
1,478,638	+				+0.1
1,478,638	+				+1.1
1,478,638	+				+0.1
1,478,639	-				+0.1
1,478,639	-				+0.1
1,478,645	+				-0.0
1,478,838	+				-0.5
1,478,848	+				-0.2
1,478,848	+				+0.0
1,478,849	-				-0.3
1,478,849	-				-0.7
1,478,849	-				-0.6
1,478,849	-				+0.1
1,478,854	+				-1.3
1,478,854	+				-1.2
1,478,854	+				+0.1
1,478,855	-				+2.8
1,478,871	+				+0.3
1,478,871	+				-1.7
1,478,871	+				+1.4
1,478,871	+				+0.5
1,478,871	+				+0.2
1,478,871	+				-0.6
1,478,871	+				-0.8
1,478,872	-				-0.3
1,478,872	-				-1.1
1,478,872	-				-1.2
1,478,872	-				+0.6
1,478,944	+				-0.5
1,478,945	-				+0.6
1,478,968	-				+1.4
1,478,968	-				+0.2
1,479,012	+				-1.0
1,479,013	-				-0.9
1,479,013	-				+0.0
1,479,042	+		Sama_1206	0.10	-0.1
1,479,042	+		Sama_1206	0.10	-2.9
1,479,074	+		Sama_1206	0.12	+0.0
1,479,074	+		Sama_1206	0.12	-0.2
1,479,075	-		Sama_1206	0.12	-0.8
1,479,075	-		Sama_1206	0.12	-0.2
1,479,085	+		Sama_1206	0.12	-1.6
1,479,085	+		Sama_1206	0.12	-0.5
1,479,086	-		Sama_1206	0.12	-2.1
1,479,108	+		Sama_1206	0.13	-0.1
1,479,150	+		Sama_1206	0.15	+0.5
1,479,168	+		Sama_1206	0.16	-0.2
1,479,168	+		Sama_1206	0.16	+0.4
1,479,168	+		Sama_1206	0.16	-0.7
1,479,169	-		Sama_1206	0.16	-1.9
1,479,169	-		Sama_1206	0.16	+0.9
1,479,169	-		Sama_1206	0.16	-0.3
1,479,169	-		Sama_1206	0.16	-0.1
1,479,176	+		Sama_1206	0.17	+0.7
1,479,176	+		Sama_1206	0.17	-0.3
1,479,176	+		Sama_1206	0.17	-0.9
1,479,176	+		Sama_1206	0.17	-0.9
1,479,176	+		Sama_1206	0.17	+0.4
1,479,176	+		Sama_1206	0.17	+0.1
1,479,176	+		Sama_1206	0.17	-0.4
1,479,176	+		Sama_1206	0.17	-1.8
1,479,176	+		Sama_1206	0.17	-1.3
1,479,176	+		Sama_1206	0.17	-0.1
1,479,176	+		Sama_1206	0.17	-1.3
1,479,176	+		Sama_1206	0.17	-1.4
1,479,177	-		Sama_1206	0.17	-0.7
1,479,177	-		Sama_1206	0.17	-0.4
1,479,177	-		Sama_1206	0.17	+1.4
1,479,177	-		Sama_1206	0.17	-0.9
1,479,177	-		Sama_1206	0.17	-1.1
1,479,177	-		Sama_1206	0.17	-0.3
1,479,177	-		Sama_1206	0.17	-0.2
1,479,177	-		Sama_1206	0.17	-0.7
1,479,177	-		Sama_1206	0.17	-1.4
1,479,177	-		Sama_1206	0.17	-1.0
1,479,262	-		Sama_1206	0.21	-0.5
1,479,301	+		Sama_1206	0.23	-0.5
1,479,301	+		Sama_1206	0.23	-0.8
1,479,301	+		Sama_1206	0.23	-1.2
1,479,301	+		Sama_1206	0.23	-2.0
1,479,301	+		Sama_1206	0.23	-0.1
1,479,302	-		Sama_1206	0.23	-0.9
1,479,360	+		Sama_1206	0.26	-0.2
1,479,361	-		Sama_1206	0.26	-1.5
1,479,361	-		Sama_1206	0.26	-0.3
1,479,376	-		Sama_1206	0.26	+1.7
1,479,462	+		Sama_1206	0.30	-0.6
1,479,462	+		Sama_1206	0.30	-0.9
1,479,463	-		Sama_1206	0.30	-0.6
1,479,463	-		Sama_1206	0.30	-0.4
1,479,463	-		Sama_1206	0.30	-1.3
1,479,463	-		Sama_1206	0.30	-1.2
1,479,463	-		Sama_1206	0.30	-1.0
1,479,465	+		Sama_1206	0.31	-0.9
1,479,465	+		Sama_1206	0.31	+0.3
1,479,466	-		Sama_1206	0.31	-0.5
1,479,466	-		Sama_1206	0.31	-1.1
1,479,466	-		Sama_1206	0.31	-1.2
1,479,466	-		Sama_1206	0.31	+1.0
1,479,466	-		Sama_1206	0.31	-1.9
1,479,466	-		Sama_1206	0.31	-0.9
1,479,469	+		Sama_1206	0.31	-0.1
1,479,470	-		Sama_1206	0.31	+0.8
1,479,470	-		Sama_1206	0.31	+1.6
1,479,516	+		Sama_1206	0.33	+1.2
1,479,541	-		Sama_1206	0.34	+0.9
1,479,541	-		Sama_1206	0.34	-0.8
1,479,578	-		Sama_1206	0.36	-0.2
1,479,633	+		Sama_1206	0.39	+0.5
1,479,633	+		Sama_1206	0.39	-0.5
1,479,634	-		Sama_1206	0.39	-0.6
1,479,647	+		Sama_1206	0.39	+0.1
1,479,647	+		Sama_1206	0.39	-0.8
1,479,647	+		Sama_1206	0.39	-1.4
1,479,647	+		Sama_1206	0.39	+0.4
1,479,654	+		Sama_1206	0.40	-1.1
1,479,655	-		Sama_1206	0.40	-0.9
1,479,736	-		Sama_1206	0.44	-0.1
1,479,736	-		Sama_1206	0.44	-1.9
1,479,747	+		Sama_1206	0.44	-1.2
1,479,748	-		Sama_1206	0.44	-0.9
1,479,748	-		Sama_1206	0.44	+0.1
1,479,748	-		Sama_1206	0.44	-0.8
1,479,748	-		Sama_1206	0.44	-1.0
1,479,825	+		Sama_1206	0.48	-0.2
1,479,825	+		Sama_1206	0.48	-0.4
1,479,826	-		Sama_1206	0.48	+0.1
1,479,831	+		Sama_1206	0.48	-0.4
1,479,832	-		Sama_1206	0.48	-0.3
1,479,832	-		Sama_1206	0.48	-0.3
1,479,934	-		Sama_1206	0.53	-0.8
1,479,997	+		Sama_1206	0.56	-1.1
1,480,020	+		Sama_1206	0.57	-0.9
1,480,020	+		Sama_1206	0.57	+1.4
1,480,020	+		Sama_1206	0.57	-2.0
1,480,020	+		Sama_1206	0.57	+0.6
1,480,020	+		Sama_1206	0.57	+0.0
1,480,021	-		Sama_1206	0.57	+0.1
1,480,054	+		Sama_1206	0.59	+0.6
1,480,161	+		Sama_1206	0.64	-0.9
1,480,161	+		Sama_1206	0.64	-1.3
1,480,161	+		Sama_1206	0.64	+0.1
1,480,162	-		Sama_1206	0.64	-0.8
1,480,162	-		Sama_1206	0.64	+0.7
1,480,216	+		Sama_1206	0.67	+0.4
1,480,216	+		Sama_1206	0.67	-0.6
1,480,217	-		Sama_1206	0.67	+1.0
1,480,217	-		Sama_1206	0.67	+0.2
1,480,217	-		Sama_1206	0.67	+1.5
1,480,217	-		Sama_1206	0.67	-0.4
1,480,217	-		Sama_1206	0.67	-2.1
1,480,217	-		Sama_1206	0.67	-0.3
1,480,227	+		Sama_1206	0.67	+0.2
1,480,227	+		Sama_1206	0.67	+1.0
1,480,228	-		Sama_1206	0.67	+0.4
1,480,320	+		Sama_1206	0.72	+0.3
1,480,320	+		Sama_1206	0.72	-0.1
1,480,320	+		Sama_1206	0.72	-0.1
1,480,320	+		Sama_1206	0.72	-0.2
1,480,320	+		Sama_1206	0.72	+2.1
1,480,320	+		Sama_1206	0.72	+0.3
1,480,320	+		Sama_1206	0.72	+0.1
1,480,320	+		Sama_1206	0.72	+0.4
1,480,321	-		Sama_1206	0.72	-1.0
1,480,321	-		Sama_1206	0.72	+1.8
1,480,321	-		Sama_1206	0.72	+0.1
1,480,321	-		Sama_1206	0.72	+0.4
1,480,321	-		Sama_1206	0.72	+1.7
1,480,321	-		Sama_1206	0.72	-0.6
1,480,321	-		Sama_1206	0.72	+0.0
1,480,321	-		Sama_1206	0.72	+1.0
1,480,321	-		Sama_1206	0.72	-1.7
1,480,321	-		Sama_1206	0.72	-1.9
1,480,321	-		Sama_1206	0.72	+1.2
1,480,321	-		Sama_1206	0.72	+0.3
1,480,321	-		Sama_1206	0.72	-1.2
1,480,321	-		Sama_1206	0.72	-0.2
1,480,347	+		Sama_1206	0.73	-0.8
1,480,386	-		Sama_1206	0.75	-1.9
1,480,420	+		Sama_1206	0.76	+1.0
1,480,441	-		Sama_1206	0.77	-1.0
1,480,441	-		Sama_1206	0.77	-1.0
1,480,441	-		Sama_1206	0.77	-0.5
1,480,442	+		Sama_1206	0.78	+0.4
1,480,463	+		Sama_1206	0.79	-0.5
1,480,515	+		Sama_1206	0.81	-0.9
1,480,515	+		Sama_1206	0.81	-0.4
1,480,515	+		Sama_1206	0.81	-2.5
1,480,516	-		Sama_1206	0.81	+0.8
1,480,516	-		Sama_1206	0.81	+3.3
1,480,516	-		Sama_1206	0.81	-0.8
1,480,516	-		Sama_1206	0.81	-0.2
1,480,516	-		Sama_1206	0.81	+0.4
1,480,551	+		Sama_1206	0.83	+0.8
1,480,551	+		Sama_1206	0.83	+1.0
1,480,551	+		Sama_1206	0.83	-1.3
1,480,552	-		Sama_1206	0.83	+1.6
1,480,552	-		Sama_1206	0.83	+0.8
1,480,671	+		Sama_1206	0.89	+0.4
1,480,672	-		Sama_1206	0.89	-1.1
1,480,672	-		Sama_1206	0.89	+0.1
1,480,736	+				-0.9
1,480,736	+				-1.7
1,480,736	+				-1.2
1,480,736	+				+0.3
1,480,736	+				-0.4
1,480,736	+				-0.2
1,480,736	+				+0.0
1,480,737	-				-1.0
1,480,737	-				+0.2
1,480,737	-				+0.1
1,480,737	-				-0.7
1,480,737	-				+0.2
1,480,737	-				-1.3
1,480,737	-				+0.0
1,480,737	-				-1.2
1,480,737	-				-0.5
1,480,737	-				+0.5
1,480,737	-				-1.2
1,480,737	-				-0.9
1,480,737	-				+0.7
1,480,742	+				-0.5
1,480,742	+				+0.6
1,480,743	-				+0.3
1,480,743	-				+0.9
1,480,743	-				-1.1
1,480,743	-				+0.0
1,480,777	+				-0.5
1,480,786	+				+1.2
1,480,839	+				-0.7
1,480,840	-				-0.3
1,480,891	+				+0.1
1,480,891	+				-1.8
1,480,891	+				-1.1
1,480,891	+				-0.6
1,480,891	+				-0.7
1,480,923	+				-0.2
1,481,223	+		Sama_1207	0.31	+0.5
1,481,223	+		Sama_1207	0.31	-2.4
1,481,224	-		Sama_1207	0.31	-0.5
1,481,224	-		Sama_1207	0.31	+0.7
1,481,450	+		Sama_1207	0.54	-0.1
1,481,451	-		Sama_1207	0.54	+0.2
1,481,451	-		Sama_1207	0.54	-1.0
1,481,515	+		Sama_1207	0.60	+0.8
1,481,515	+		Sama_1207	0.60	-0.4
1,481,515	+		Sama_1207	0.60	-2.0
1,481,516	-		Sama_1207	0.61	-1.1
1,481,516	-		Sama_1207	0.61	-0.4
1,481,516	-		Sama_1207	0.61	-1.0
1,481,516	-		Sama_1207	0.61	-0.1
1,481,516	-		Sama_1207	0.61	-0.3
1,481,516	-		Sama_1207	0.61	+1.0
1,481,516	-		Sama_1207	0.61	-1.2
1,481,516	-		Sama_1207	0.61	-0.4
1,481,516	-		Sama_1207	0.61	-0.1
1,481,516	-		Sama_1207	0.61	-0.2
1,481,581	+		Sama_1207	0.67	-0.5
1,481,889	-				-0.8
1,481,889	-				-0.8