Strain Fitness in Shewanella amazonensis SB2B around Sama_1006

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
1,216,791	+				+1.4
1,216,791	+				-0.2
1,216,792	-				-0.3
1,216,792	-				+0.9
1,216,804	+				-0.2
1,216,804	+				+0.0
1,216,804	+				-0.4
1,216,804	+				-0.5
1,216,806	+				-0.3
1,216,806	+				+0.1
1,216,806	+				-0.5
1,216,806	+				-0.4
1,216,806	+				+3.2
1,216,806	+				-0.2
1,216,806	+				-2.0
1,216,806	+				+0.4
1,216,807	-				-0.4
1,216,807	-				-2.2
1,216,807	-				+0.6
1,216,818	-				-0.2
1,216,818	-				-0.7
1,216,821	+				-1.6
1,216,821	+				-0.3
1,216,821	+				+0.8
1,216,822	-				-0.6
1,216,935	-		Sama_1005	0.10	-0.8
1,216,995	-		Sama_1005	0.17	+0.1
1,217,030	+		Sama_1005	0.22	+1.5
1,217,030	+		Sama_1005	0.22	+0.4
1,217,052	+		Sama_1005	0.24	+1.2
1,217,053	-		Sama_1005	0.24	+0.3
1,217,054	+		Sama_1005	0.24	-0.9
1,217,156	+		Sama_1005	0.37	-0.2
1,217,156	+		Sama_1005	0.37	-0.8
1,217,204	+		Sama_1005	0.42	-1.2
1,217,204	+		Sama_1005	0.42	-1.9
1,217,205	-		Sama_1005	0.42	+0.6
1,217,205	-		Sama_1005	0.42	+0.4
1,217,205	-		Sama_1005	0.42	+1.7
1,217,248	+		Sama_1005	0.47	-2.2
1,217,248	+		Sama_1005	0.47	-1.1
1,217,249	-		Sama_1005	0.48	-1.6
1,217,250	+		Sama_1005	0.48	+0.2
1,217,250	+		Sama_1005	0.48	-1.2
1,217,250	+		Sama_1005	0.48	-1.9
1,217,250	+		Sama_1005	0.48	-0.7
1,217,250	+		Sama_1005	0.48	-1.4
1,217,250	+		Sama_1005	0.48	-0.3
1,217,250	+		Sama_1005	0.48	+0.7
1,217,250	+		Sama_1005	0.48	-0.5
1,217,250	+		Sama_1005	0.48	-1.9
1,217,250	+		Sama_1005	0.48	+0.1
1,217,251	-		Sama_1005	0.48	+1.0
1,217,251	-		Sama_1005	0.48	-0.9
1,217,251	-		Sama_1005	0.48	-1.0
1,217,251	-		Sama_1005	0.48	+0.7
1,217,251	-		Sama_1005	0.48	-1.0
1,217,251	-		Sama_1005	0.48	-0.2
1,217,283	+		Sama_1005	0.52	-0.6
1,217,284	-		Sama_1005	0.52	-0.2
1,217,311	+		Sama_1005	0.55	+0.7
1,217,318	+		Sama_1005	0.56	+1.5
1,217,319	-		Sama_1005	0.56	-1.5
1,217,319	-		Sama_1005	0.56	-0.5
1,217,377	+		Sama_1005	0.63	-0.6
1,217,377	+		Sama_1005	0.63	-1.1
1,217,378	-		Sama_1005	0.63	+0.2
1,217,496	+		Sama_1005	0.77	-0.7
1,217,517	+		Sama_1005	0.79	+0.1
1,217,517	+		Sama_1005	0.79	-1.9
1,217,517	+		Sama_1005	0.79	-0.5
1,217,517	+		Sama_1005	0.79	+0.3
1,217,518	-		Sama_1005	0.79	-0.1
1,217,547	+		Sama_1005	0.83	+0.8
1,217,548	-		Sama_1005	0.83	+0.4
1,217,596	+		Sama_1005	0.89	+0.1
1,217,596	+		Sama_1005	0.89	-0.2
1,217,597	-		Sama_1005	0.89	-0.6
1,217,661	+				+0.2
1,217,661	+				-1.0
1,217,661	+				-2.5
1,217,662	-				-0.6
1,217,662	-				-0.9
1,217,662	-				+0.1
1,217,662	-				+0.9
1,217,662	-				-0.4
1,217,682	+				-0.3
1,217,682	+				+0.1
1,217,683	-				-1.3
1,217,688	+				+0.0
1,217,689	-				+0.6
1,217,689	-				-1.3
1,217,738	-				+1.5
1,217,738	-				-1.2
1,217,748	+				-0.1
1,217,748	+				-0.2
1,217,749	-				-0.8
1,217,749	-				+0.6
1,217,749	-				+1.7
1,217,764	+				-1.8
1,217,772	-				-0.1
1,217,811	+				-1.5
1,217,812	-				-0.1
1,217,812	-				-0.3
1,217,812	-				-0.8
1,217,840	+				+0.1
1,217,852	-				-0.6
1,217,893	+				-0.3
1,217,894	-				-1.1
1,217,973	+		Sama_1006	0.13	+0.2
1,217,973	+		Sama_1006	0.13	-0.3
1,217,973	+		Sama_1006	0.13	+0.2
1,217,973	+		Sama_1006	0.13	-1.2
1,217,974	-		Sama_1006	0.13	+0.3
1,217,974	-		Sama_1006	0.13	-1.1
1,217,974	-		Sama_1006	0.13	-0.4
1,217,974	-		Sama_1006	0.13	-0.5
1,217,974	-		Sama_1006	0.13	-0.5
1,217,983	+		Sama_1006	0.14	-0.2
1,217,983	+		Sama_1006	0.14	+0.1
1,217,983	+		Sama_1006	0.14	-1.0
1,217,984	-		Sama_1006	0.14	+0.7
1,217,984	-		Sama_1006	0.14	+0.2
1,217,984	-		Sama_1006	0.14	-0.3
1,217,984	-		Sama_1006	0.14	+0.6
1,217,995	+		Sama_1006	0.15	-0.4
1,217,995	+		Sama_1006	0.15	+0.9
1,217,996	-		Sama_1006	0.15	+0.4
1,217,996	-		Sama_1006	0.15	+2.0
1,217,996	-		Sama_1006	0.15	-0.3
1,217,996	-		Sama_1006	0.15	-0.2
1,218,008	-		Sama_1006	0.16	+0.0
1,218,052	+		Sama_1006	0.19	+0.7
1,218,053	-		Sama_1006	0.19	-1.0
1,218,087	+		Sama_1006	0.21	+1.0
1,218,087	+		Sama_1006	0.21	+1.4
1,218,087	+		Sama_1006	0.21	+0.5
1,218,088	-		Sama_1006	0.21	-1.6
1,218,088	-		Sama_1006	0.21	+0.4
1,218,088	-		Sama_1006	0.21	-2.0
1,218,088	-		Sama_1006	0.21	-1.9
1,218,091	-		Sama_1006	0.21	+0.2
1,218,091	-		Sama_1006	0.21	+0.4
1,218,091	-		Sama_1006	0.21	+0.2
1,218,091	-		Sama_1006	0.21	-0.9
1,218,093	+		Sama_1006	0.21	+0.4
1,218,093	+		Sama_1006	0.21	+2.3
1,218,093	+		Sama_1006	0.21	+0.8
1,218,093	+		Sama_1006	0.21	-0.8
1,218,093	+		Sama_1006	0.21	-0.6
1,218,093	+		Sama_1006	0.21	-0.1
1,218,093	+		Sama_1006	0.21	-0.5
1,218,093	+		Sama_1006	0.21	+2.4
1,218,093	+		Sama_1006	0.21	+0.2
1,218,094	-		Sama_1006	0.21	+1.2
1,218,094	-		Sama_1006	0.21	-0.3
1,218,094	-		Sama_1006	0.21	-0.7
1,218,118	-		Sama_1006	0.23	+0.3
1,218,118	-		Sama_1006	0.23	-1.5
1,218,162	+		Sama_1006	0.26	+0.4
1,218,162	+		Sama_1006	0.26	-1.3
1,218,163	-		Sama_1006	0.26	-0.6
1,218,163	-		Sama_1006	0.26	+1.0
1,218,177	+		Sama_1006	0.27	-0.3
1,218,177	+		Sama_1006	0.27	-0.5
1,218,240	-		Sama_1006	0.31	-0.3
1,218,280	+		Sama_1006	0.34	-0.7
1,218,281	-		Sama_1006	0.34	-0.1
1,218,307	+		Sama_1006	0.36	+0.7
1,218,308	-		Sama_1006	0.36	+0.2
1,218,336	+		Sama_1006	0.38	-0.8
1,218,337	-		Sama_1006	0.38	-0.3
1,218,337	-		Sama_1006	0.38	+0.5
1,218,347	+		Sama_1006	0.38	-1.6
1,218,348	-		Sama_1006	0.38	+0.1
1,218,412	+		Sama_1006	0.43	-0.6
1,218,412	+		Sama_1006	0.43	-0.8
1,218,412	+		Sama_1006	0.43	-0.6
1,218,413	-		Sama_1006	0.43	-0.1
1,218,413	-		Sama_1006	0.43	+1.5
1,218,413	-		Sama_1006	0.43	+0.9
1,218,413	-		Sama_1006	0.43	-0.6
1,218,413	-		Sama_1006	0.43	-1.2
1,218,413	-		Sama_1006	0.43	+0.0
1,218,436	+		Sama_1006	0.44	-2.3
1,218,436	+		Sama_1006	0.44	+0.8
1,218,436	+		Sama_1006	0.44	+0.8
1,218,436	+		Sama_1006	0.44	+1.5
1,218,436	+		Sama_1006	0.44	+0.4
1,218,436	+		Sama_1006	0.44	+0.6
1,218,437	-		Sama_1006	0.44	-0.3
1,218,437	-		Sama_1006	0.44	-0.9
1,218,437	-		Sama_1006	0.44	+0.8
1,218,437	-		Sama_1006	0.44	+0.3
1,218,437	-		Sama_1006	0.44	-0.8
1,218,449	+		Sama_1006	0.45	+0.4
1,218,523	+		Sama_1006	0.50	+0.1
1,218,533	+		Sama_1006	0.51	+0.8
1,218,534	-		Sama_1006	0.51	+0.7
1,218,542	+		Sama_1006	0.52	-1.0
1,218,542	+		Sama_1006	0.52	+0.3
1,218,542	+		Sama_1006	0.52	-1.2
1,218,542	+		Sama_1006	0.52	+0.1
1,218,543	-		Sama_1006	0.52	+0.5
1,218,543	-		Sama_1006	0.52	+0.5
1,218,543	-		Sama_1006	0.52	+0.8
1,218,595	+		Sama_1006	0.55	-0.4
1,218,628	-		Sama_1006	0.57	-0.3
1,218,659	+		Sama_1006	0.59	-0.5
1,218,659	+		Sama_1006	0.59	+0.5
1,218,741	+		Sama_1006	0.65	-0.5
1,218,741	+		Sama_1006	0.65	-0.3
1,218,741	+		Sama_1006	0.65	+0.5
1,218,741	+		Sama_1006	0.65	-0.6
1,218,741	+		Sama_1006	0.65	-0.1
1,218,741	+		Sama_1006	0.65	+1.6
1,218,741	+		Sama_1006	0.65	-0.7
1,218,741	+		Sama_1006	0.65	+1.1
1,218,742	-		Sama_1006	0.65	-0.4
1,218,742	-		Sama_1006	0.65	+0.4
1,218,742	-		Sama_1006	0.65	-0.9
1,218,742	-		Sama_1006	0.65	-0.3
1,218,745	+		Sama_1006	0.65	+0.8
1,218,745	+		Sama_1006	0.65	-2.7
1,218,745	+		Sama_1006	0.65	+1.8
1,218,745	+		Sama_1006	0.65	+0.4
1,218,745	+		Sama_1006	0.65	-0.3
1,218,745	+		Sama_1006	0.65	-0.7
1,218,745	+		Sama_1006	0.65	-1.0
1,218,745	+		Sama_1006	0.65	+0.2
1,218,745	+		Sama_1006	0.65	-1.5
1,218,745	+		Sama_1006	0.65	+0.3
1,218,745	+		Sama_1006	0.65	+0.3
1,218,745	+		Sama_1006	0.65	-0.6
1,218,745	+		Sama_1006	0.65	+0.0
1,218,745	+		Sama_1006	0.65	-2.1
1,218,745	+		Sama_1006	0.65	-1.5
1,218,745	+		Sama_1006	0.65	-1.1
1,218,745	+		Sama_1006	0.65	-0.1
1,218,745	+		Sama_1006	0.65	+0.1
1,218,745	+		Sama_1006	0.65	+2.2
1,218,745	+		Sama_1006	0.65	+0.0
1,218,746	-		Sama_1006	0.65	-0.1
1,218,746	-		Sama_1006	0.65	+1.3
1,218,746	-		Sama_1006	0.65	-0.2
1,218,746	-		Sama_1006	0.65	+0.7
1,218,746	-		Sama_1006	0.65	+1.4
1,218,748	+		Sama_1006	0.65	-0.8
1,218,748	+		Sama_1006	0.65	+1.5
1,218,748	+		Sama_1006	0.65	+0.4
1,218,749	-		Sama_1006	0.65	-0.8
1,218,778	+		Sama_1006	0.67	-1.2
1,218,807	+		Sama_1006	0.69	-0.6
1,218,871	+		Sama_1006	0.74	-0.8
1,218,871	+		Sama_1006	0.74	-1.0
1,218,871	+		Sama_1006	0.74	+1.1
1,218,907	+		Sama_1006	0.76	-0.1
1,218,980	+		Sama_1006	0.81	+0.4
1,218,980	+		Sama_1006	0.81	-0.7
1,219,063	+		Sama_1006	0.87	+1.0
1,219,063	+		Sama_1006	0.87	+0.2
1,219,063	+		Sama_1006	0.87	+0.8
1,219,063	+		Sama_1006	0.87	-2.3
1,219,063	+		Sama_1006	0.87	+0.5
1,219,064	-		Sama_1006	0.87	-0.4
1,219,064	-		Sama_1006	0.87	-0.8
1,219,066	+		Sama_1006	0.87	+0.7
1,219,066	+		Sama_1006	0.87	-0.6
1,219,066	+		Sama_1006	0.87	+0.0
1,219,067	-		Sama_1006	0.87	+3.2
1,219,174	+				-1.2
1,219,188	-				+0.5
1,219,188	-				-1.6
1,219,264	-				-0.2
1,219,275	-				-0.9
1,219,344	+		Sama_1007	0.19	+1.2
1,219,345	-		Sama_1007	0.20	+0.0
1,219,345	-		Sama_1007	0.20	-0.9
1,219,408	-		Sama_1007	0.35	-1.1
1,219,436	-		Sama_1007	0.41	-1.3
1,219,436	-		Sama_1007	0.41	+0.5
1,219,548	-		Sama_1007	0.68	+0.0
1,219,551	-		Sama_1007	0.68	+0.1
1,219,575	+		Sama_1007	0.74	-0.1
1,219,575	+		Sama_1007	0.74	-1.7
1,219,576	-		Sama_1007	0.74	+0.7
1,219,576	-		Sama_1007	0.74	+1.5
1,219,576	-		Sama_1007	0.74	+0.2
1,219,576	-		Sama_1007	0.74	+0.7
1,219,645	-				+0.3
1,219,719	-				-0.5
1,219,783	-				-0.0
1,219,783	-				-1.3
1,219,798	+		Sama_1008	0.11	-0.6
1,219,798	+		Sama_1008	0.11	+0.5
1,219,799	-		Sama_1008	0.11	+0.4
1,219,852	+		Sama_1008	0.18	+0.0
1,219,852	+		Sama_1008	0.18	-0.4
1,219,853	-		Sama_1008	0.18	-0.8
1,219,853	-		Sama_1008	0.18	+0.4
1,219,853	-		Sama_1008	0.18	-0.9
1,219,853	-		Sama_1008	0.18	-0.6
1,219,853	-		Sama_1008	0.18	-0.5
1,219,930	+		Sama_1008	0.28	-2.1
1,219,930	+		Sama_1008	0.28	-1.4
1,219,931	-		Sama_1008	0.28	-2.5
1,219,931	-		Sama_1008	0.28	-1.0
1,219,931	-		Sama_1008	0.28	-0.5
1,219,931	-		Sama_1008	0.28	+0.8
1,219,931	-		Sama_1008	0.28	-1.2
1,219,931	-		Sama_1008	0.28	-1.2
1,219,931	-		Sama_1008	0.28	-1.4
1,219,931	-		Sama_1008	0.28	+0.4
1,219,932	+		Sama_1008	0.28	+1.2
1,219,933	-		Sama_1008	0.28	-0.8
1,219,933	-		Sama_1008	0.28	+0.1
1,219,933	-		Sama_1008	0.28	+1.2
1,219,933	-		Sama_1008	0.28	+1.4
1,219,933	-		Sama_1008	0.28	+0.9
1,219,959	+		Sama_1008	0.32	-0.5
1,219,959	+		Sama_1008	0.32	-0.6
1,219,959	+		Sama_1008	0.32	-2.0
1,219,959	+		Sama_1008	0.32	+1.4
1,219,959	+		Sama_1008	0.32	-1.7
1,219,959	+		Sama_1008	0.32	-0.5
1,219,959	+		Sama_1008	0.32	-0.6
1,219,959	+		Sama_1008	0.32	+0.7
1,219,959	+		Sama_1008	0.32	-0.9
1,219,959	+		Sama_1008	0.32	-0.4
1,219,959	+		Sama_1008	0.32	+0.0
1,219,960	-		Sama_1008	0.32	+1.0
1,219,960	-		Sama_1008	0.32	+0.2
1,219,960	-		Sama_1008	0.32	+0.0
1,220,000	-		Sama_1008	0.37	-2.0
1,220,010	+		Sama_1008	0.38	-0.3
1,220,010	+		Sama_1008	0.38	+0.6
1,220,011	-		Sama_1008	0.38	+0.2
1,220,011	-		Sama_1008	0.38	-1.4
1,220,068	-		Sama_1008	0.46	-1.5
1,220,068	-		Sama_1008	0.46	-0.8
1,220,084	+		Sama_1008	0.48	-0.3
1,220,084	+		Sama_1008	0.48	+0.0
1,220,084	+		Sama_1008	0.48	+2.4
1,220,084	+		Sama_1008	0.48	-0.8
1,220,085	-		Sama_1008	0.48	-0.3
1,220,085	-		Sama_1008	0.48	-0.4
1,220,085	-		Sama_1008	0.48	-1.2
1,220,147	+		Sama_1008	0.56	-0.8
1,220,148	-		Sama_1008	0.56	+0.0
1,220,154	+		Sama_1008	0.57	-0.2