Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0834 and Dshi_0835 are separated by 56 nucleotides Dshi_0835 and Dshi_0836 are separated by 5 nucleotides
Dshi_0834: Dshi_0834 - protein of unknown function DUF6 transmembrane (RefSeq), at 843,077 to 843,994
_0834
Dshi_0835: Dshi_0835 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq), at 844,051 to 846,264
_0835
Dshi_0836: Dshi_0836 - acetyl-CoA acetyltransferase (RefSeq), at 846,270 to 847,481
_0836
Position (kb) 844
845
846
847 Strain fitness (log2 ratio) -2
-1
0
1 at 843.051 kb on + strand at 843.121 kb on - strand at 843.191 kb on + strand, within Dshi_0834 at 843.240 kb on - strand, within Dshi_0834 at 843.591 kb on + strand, within Dshi_0834 at 843.668 kb on + strand, within Dshi_0834 at 843.687 kb on - strand, within Dshi_0834 at 843.827 kb on + strand, within Dshi_0834 at 844.203 kb on + strand at 844.301 kb on - strand, within Dshi_0835 at 844.307 kb on - strand, within Dshi_0835 at 844.316 kb on + strand, within Dshi_0835 at 844.367 kb on + strand, within Dshi_0835 at 844.406 kb on + strand, within Dshi_0835 at 844.416 kb on + strand, within Dshi_0835 at 844.547 kb on + strand, within Dshi_0835 at 844.817 kb on + strand, within Dshi_0835 at 844.879 kb on - strand, within Dshi_0835 at 844.889 kb on - strand, within Dshi_0835 at 844.898 kb on + strand, within Dshi_0835 at 845.093 kb on - strand, within Dshi_0835 at 845.173 kb on + strand, within Dshi_0835 at 845.181 kb on - strand, within Dshi_0835 at 845.223 kb on - strand, within Dshi_0835 at 845.292 kb on + strand, within Dshi_0835 at 845.570 kb on + strand, within Dshi_0835 at 845.654 kb on + strand, within Dshi_0835 at 845.734 kb on - strand, within Dshi_0835 at 846.004 kb on + strand, within Dshi_0835 at 846.358 kb on - strand at 846.360 kb on + strand at 846.455 kb on + strand, within Dshi_0836 at 846.492 kb on - strand, within Dshi_0836 at 846.506 kb on + strand, within Dshi_0836 at 846.569 kb on + strand, within Dshi_0836 at 846.627 kb on - strand, within Dshi_0836 at 846.820 kb on - strand, within Dshi_0836 at 846.890 kb on - strand, within Dshi_0836 at 846.938 kb on - strand, within Dshi_0836 at 846.967 kb on + strand, within Dshi_0836 at 847.035 kb on - strand, within Dshi_0836 at 847.076 kb on - strand, within Dshi_0836 at 847.229 kb on + strand, within Dshi_0836
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 843,051 + -0.0 843,121 - -0.6 843,191 + Dshi_0834 0.12 -1.9 843,240 - Dshi_0834 0.18 +0.4 843,591 + Dshi_0834 0.56 -0.8 843,668 + Dshi_0834 0.64 -0.2 843,687 - Dshi_0834 0.66 -0.4 843,827 + Dshi_0834 0.82 -0.2 844,203 + -0.5 844,301 - Dshi_0835 0.11 -0.5 844,307 - Dshi_0835 0.12 -0.1 844,316 + Dshi_0835 0.12 -0.5 844,367 + Dshi_0835 0.14 +0.8 844,406 + Dshi_0835 0.16 +0.9 844,416 + Dshi_0835 0.16 -1.4 844,547 + Dshi_0835 0.22 -1.0 844,817 + Dshi_0835 0.35 -0.2 844,879 - Dshi_0835 0.37 -1.1 844,889 - Dshi_0835 0.38 -0.2 844,898 + Dshi_0835 0.38 -1.0 845,093 - Dshi_0835 0.47 -0.2 845,173 + Dshi_0835 0.51 +0.4 845,181 - Dshi_0835 0.51 -0.1 845,223 - Dshi_0835 0.53 -0.7 845,292 + Dshi_0835 0.56 -0.0 845,570 + Dshi_0835 0.69 -0.7 845,654 + Dshi_0835 0.72 -0.3 845,734 - Dshi_0835 0.76 +0.2 846,004 + Dshi_0835 0.88 -1.2 846,358 - +0.2 846,360 + +0.5 846,455 + Dshi_0836 0.15 -0.2 846,492 - Dshi_0836 0.18 +0.1 846,506 + Dshi_0836 0.19 -0.1 846,569 + Dshi_0836 0.25 +0.9 846,627 - Dshi_0836 0.29 -0.1 846,820 - Dshi_0836 0.45 +0.3 846,890 - Dshi_0836 0.51 -0.0 846,938 - Dshi_0836 0.55 +0.5 846,967 + Dshi_0836 0.58 +0.4 847,035 - Dshi_0836 0.63 -0.7 847,076 - Dshi_0836 0.67 +0.5 847,229 + Dshi_0836 0.79 -1.8
Or see this region's nucleotide sequence