Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0204 and Dshi_0205 are separated by 275 nucleotides Dshi_0205 and Dshi_0206 overlap by 8 nucleotides Dshi_0206 and Dshi_0207 are separated by 80 nucleotides
Dshi_0204: Dshi_0204 - acyl-CoA dehydrogenase domain protein (RefSeq), at 201,901 to 203,595
_0204
Dshi_0205: Dshi_0205 - protein of unknown function DUF81 (RefSeq), at 203,871 to 204,635
_0205
Dshi_0206: Dshi_0206 - hypothetical protein (RefSeq), at 204,628 to 205,515
_0206
Dshi_0207: Dshi_0207 - Phosphotransferase system, phosphocarrier protein HPr (RefSeq), at 205,596 to 205,865
_0207
Position (kb)
203
204
205 Strain fitness (log2 ratio)
-2
-1
0
1 at 202.871 kb on + strand, within Dshi_0204 at 202.871 kb on + strand, within Dshi_0204 at 202.879 kb on - strand, within Dshi_0204 at 202.896 kb on + strand, within Dshi_0204 at 203.144 kb on + strand, within Dshi_0204 at 203.260 kb on - strand, within Dshi_0204 at 203.735 kb on - strand at 203.991 kb on - strand, within Dshi_0205 at 204.028 kb on + strand, within Dshi_0205 at 204.160 kb on + strand, within Dshi_0205 at 204.383 kb on + strand, within Dshi_0205 at 204.480 kb on - strand, within Dshi_0205 at 204.603 kb on + strand at 204.754 kb on + strand, within Dshi_0206 at 204.762 kb on - strand, within Dshi_0206 at 204.882 kb on + strand, within Dshi_0206 at 204.999 kb on + strand, within Dshi_0206 at 205.048 kb on + strand, within Dshi_0206 at 205.099 kb on - strand, within Dshi_0206 at 205.141 kb on + strand, within Dshi_0206 at 205.296 kb on - strand, within Dshi_0206 at 205.348 kb on - strand, within Dshi_0206 at 205.353 kb on - strand, within Dshi_0206 at 205.370 kb on + strand, within Dshi_0206 at 205.430 kb on - strand at 205.457 kb on + strand at 205.483 kb on - strand at 205.552 kb on + strand at 205.555 kb on - strand at 205.589 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 202,871 + Dshi_0204 0.57 +0.3 202,871 + Dshi_0204 0.57 +0.2 202,879 - Dshi_0204 0.58 -0.6 202,896 + Dshi_0204 0.59 +0.5 203,144 + Dshi_0204 0.73 -0.4 203,260 - Dshi_0204 0.80 +0.4 203,735 - +1.1 203,991 - Dshi_0205 0.16 -0.4 204,028 + Dshi_0205 0.21 +0.4 204,160 + Dshi_0205 0.38 +1.4 204,383 + Dshi_0205 0.67 +0.1 204,480 - Dshi_0205 0.80 -2.3 204,603 + -0.1 204,754 + Dshi_0206 0.14 -0.1 204,762 - Dshi_0206 0.15 -0.3 204,882 + Dshi_0206 0.29 -0.3 204,999 + Dshi_0206 0.42 +0.2 205,048 + Dshi_0206 0.47 -0.2 205,099 - Dshi_0206 0.53 -0.1 205,141 + Dshi_0206 0.58 -0.5 205,296 - Dshi_0206 0.75 +0.6 205,348 - Dshi_0206 0.81 +0.7 205,353 - Dshi_0206 0.82 +1.1 205,370 + Dshi_0206 0.84 -0.8 205,430 - -0.7 205,457 + -0.3 205,483 - -0.0 205,552 + +0.4 205,555 - -1.5 205,589 - +0.8
Or see this region's nucleotide sequence