Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0871 and Psest_0872 are separated by 174 nucleotides Psest_0872 and Psest_0873 overlap by 1 nucleotides
Psest_0871: Psest_0871 - maltose ABC transporter, ATPase component MalK (from data) , at 947,237 to 948,352
_0871
Psest_0872: Psest_0872 - Helix-turn-helix., at 948,527 to 948,844
_0872
Psest_0873: Psest_0873 - HipA N-terminal domain, at 948,844 to 950,163
_0873
Position (kb)
948
949 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 947.801 kb on + strand, within Psest_0871 at 947.801 kb on + strand, within Psest_0871 at 947.801 kb on + strand, within Psest_0871 at 947.801 kb on + strand, within Psest_0871 at 947.801 kb on + strand, within Psest_0871 at 947.801 kb on + strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.802 kb on - strand, within Psest_0871 at 947.901 kb on - strand, within Psest_0871 at 948.167 kb on + strand, within Psest_0871 at 948.168 kb on - strand, within Psest_0871 at 948.179 kb on + strand, within Psest_0871 at 948.179 kb on + strand, within Psest_0871 at 948.179 kb on + strand, within Psest_0871 at 948.179 kb on + strand, within Psest_0871 at 948.180 kb on - strand, within Psest_0871 at 948.180 kb on - strand, within Psest_0871 at 948.180 kb on - strand, within Psest_0871 at 948.344 kb on + strand at 948.344 kb on + strand at 948.344 kb on + strand at 948.345 kb on - strand at 948.345 kb on - strand at 948.345 kb on - strand at 948.345 kb on - strand at 948.778 kb on + strand, within Psest_0872 at 948.778 kb on + strand, within Psest_0872 at 948.911 kb on + strand at 948.965 kb on + strand at 948.965 kb on + strand at 948.965 kb on + strand at 948.966 kb on - strand at 948.966 kb on - strand at 948.966 kb on - strand at 949.302 kb on + strand, within Psest_0873 at 949.302 kb on + strand, within Psest_0873 at 949.302 kb on + strand, within Psest_0873 at 949.303 kb on - strand, within Psest_0873 at 949.303 kb on - strand, within Psest_0873 at 949.303 kb on - strand, within Psest_0873 at 949.303 kb on - strand, within Psest_0873 at 949.318 kb on + strand, within Psest_0873 at 949.318 kb on + strand, within Psest_0873 at 949.318 kb on + strand, within Psest_0873 at 949.319 kb on - strand, within Psest_0873 at 949.319 kb on - strand, within Psest_0873 at 949.319 kb on - strand, within Psest_0873 at 949.353 kb on + strand, within Psest_0873 at 949.353 kb on + strand, within Psest_0873 at 949.354 kb on - strand, within Psest_0873 at 949.354 kb on - strand, within Psest_0873 at 949.369 kb on - strand, within Psest_0873 at 949.452 kb on - strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.483 kb on + strand, within Psest_0873 at 949.484 kb on - strand, within Psest_0873 at 949.484 kb on - strand, within Psest_0873 at 949.484 kb on - strand, within Psest_0873 at 949.484 kb on - strand, within Psest_0873 at 949.484 kb on - strand, within Psest_0873 at 949.484 kb on - strand, within Psest_0873 at 949.484 kb on - strand, within Psest_0873 at 949.501 kb on + strand, within Psest_0873 at 949.501 kb on + strand, within Psest_0873 at 949.502 kb on - strand, within Psest_0873 at 949.502 kb on - strand, within Psest_0873 at 949.561 kb on - strand, within Psest_0873 at 949.597 kb on + strand, within Psest_0873 at 949.598 kb on - strand, within Psest_0873 at 949.598 kb on - strand, within Psest_0873 at 949.598 kb on - strand, within Psest_0873 at 949.598 kb on - strand, within Psest_0873 at 949.603 kb on + strand, within Psest_0873 at 949.603 kb on + strand, within Psest_0873 at 949.603 kb on + strand, within Psest_0873 at 949.603 kb on + strand, within Psest_0873 at 949.603 kb on + strand, within Psest_0873 at 949.604 kb on - strand, within Psest_0873 at 949.604 kb on - strand, within Psest_0873 at 949.604 kb on - strand, within Psest_0873 at 949.604 kb on - strand, within Psest_0873 at 949.769 kb on + strand, within Psest_0873 at 949.783 kb on + strand, within Psest_0873 at 949.783 kb on + strand, within Psest_0873 at 949.784 kb on - strand, within Psest_0873 at 949.784 kb on - strand, within Psest_0873 at 949.784 kb on - strand, within Psest_0873
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 947,801 + Psest_0871 0.51 -1.9 947,801 + Psest_0871 0.51 +1.3 947,801 + Psest_0871 0.51 +0.9 947,801 + Psest_0871 0.51 -1.2 947,801 + Psest_0871 0.51 -2.3 947,801 + Psest_0871 0.51 -1.6 947,802 - Psest_0871 0.51 +1.3 947,802 - Psest_0871 0.51 -2.5 947,802 - Psest_0871 0.51 -0.2 947,802 - Psest_0871 0.51 +0.4 947,802 - Psest_0871 0.51 -1.2 947,802 - Psest_0871 0.51 +1.6 947,802 - Psest_0871 0.51 -1.9 947,802 - Psest_0871 0.51 -2.0 947,901 - Psest_0871 0.59 -0.2 948,167 + Psest_0871 0.83 +1.3 948,168 - Psest_0871 0.83 +2.0 948,179 + Psest_0871 0.84 +2.6 948,179 + Psest_0871 0.84 +2.7 948,179 + Psest_0871 0.84 -0.1 948,179 + Psest_0871 0.84 -1.8 948,180 - Psest_0871 0.84 +0.3 948,180 - Psest_0871 0.84 +0.0 948,180 - Psest_0871 0.84 -0.7 948,344 + +0.1 948,344 + -1.5 948,344 + +6.6 948,345 - +0.4 948,345 - -1.6 948,345 - +2.0 948,345 - -0.9 948,778 + Psest_0872 0.79 +0.6 948,778 + Psest_0872 0.79 -1.9 948,911 + +1.9 948,965 + +1.6 948,965 + +1.4 948,965 + -0.5 948,966 - +1.6 948,966 - -0.4 948,966 - -0.3 949,302 + Psest_0873 0.35 -0.9 949,302 + Psest_0873 0.35 -0.4 949,302 + Psest_0873 0.35 -0.3 949,303 - Psest_0873 0.35 +2.0 949,303 - Psest_0873 0.35 -1.6 949,303 - Psest_0873 0.35 -3.6 949,303 - Psest_0873 0.35 -1.3 949,318 + Psest_0873 0.36 -0.2 949,318 + Psest_0873 0.36 -1.5 949,318 + Psest_0873 0.36 -3.3 949,319 - Psest_0873 0.36 +0.0 949,319 - Psest_0873 0.36 -0.2 949,319 - Psest_0873 0.36 -2.0 949,353 + Psest_0873 0.39 -1.8 949,353 + Psest_0873 0.39 -1.7 949,354 - Psest_0873 0.39 +0.0 949,354 - Psest_0873 0.39 -2.7 949,369 - Psest_0873 0.40 -0.0 949,452 - Psest_0873 0.46 -3.4 949,483 + Psest_0873 0.48 -0.6 949,483 + Psest_0873 0.48 -0.5 949,483 + Psest_0873 0.48 -0.4 949,483 + Psest_0873 0.48 -1.7 949,483 + Psest_0873 0.48 -1.7 949,483 + Psest_0873 0.48 +0.3 949,483 + Psest_0873 0.48 -0.5 949,483 + Psest_0873 0.48 -3.5 949,483 + Psest_0873 0.48 -0.6 949,483 + Psest_0873 0.48 -2.7 949,483 + Psest_0873 0.48 -0.6 949,483 + Psest_0873 0.48 +1.0 949,483 + Psest_0873 0.48 +0.3 949,484 - Psest_0873 0.48 -0.6 949,484 - Psest_0873 0.48 +1.2 949,484 - Psest_0873 0.48 -0.4 949,484 - Psest_0873 0.48 +0.3 949,484 - Psest_0873 0.48 -0.1 949,484 - Psest_0873 0.48 +0.3 949,484 - Psest_0873 0.48 +1.1 949,501 + Psest_0873 0.50 +1.0 949,501 + Psest_0873 0.50 -2.4 949,502 - Psest_0873 0.50 -1.3 949,502 - Psest_0873 0.50 -1.2 949,561 - Psest_0873 0.54 -1.3 949,597 + Psest_0873 0.57 +1.5 949,598 - Psest_0873 0.57 -0.9 949,598 - Psest_0873 0.57 +1.7 949,598 - Psest_0873 0.57 -0.1 949,598 - Psest_0873 0.57 +3.2 949,603 + Psest_0873 0.57 -0.6 949,603 + Psest_0873 0.57 -0.6 949,603 + Psest_0873 0.57 +1.3 949,603 + Psest_0873 0.57 -3.2 949,603 + Psest_0873 0.57 -0.2 949,604 - Psest_0873 0.58 +3.1 949,604 - Psest_0873 0.58 +1.7 949,604 - Psest_0873 0.58 +0.1 949,604 - Psest_0873 0.58 -0.4 949,769 + Psest_0873 0.70 -1.4 949,783 + Psest_0873 0.71 +0.3 949,783 + Psest_0873 0.71 +1.3 949,784 - Psest_0873 0.71 -1.2 949,784 - Psest_0873 0.71 -3.1 949,784 - Psest_0873 0.71 -0.4
Or see this region's nucleotide sequence