Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0732 and Psest_0733 overlap by 4 nucleotides Psest_0733 and Psest_0734 are separated by 4 nucleotides
Psest_0732: Psest_0732 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 801,780 to 803,252
_0732
Psest_0733: Psest_0733 - Cation/multidrug efflux pump, at 803,249 to 806,293
_0733
Psest_0734: Psest_0734 - RND family efflux transporter, MFP subunit, at 806,298 to 807,377
_0734
Position (kb) 803
804
805
806
807 Strain fitness (log2 ratio) -1
0
1
2
3 at 803.031 kb on + strand, within Psest_0732 at 803.031 kb on + strand, within Psest_0732 at 803.032 kb on - strand, within Psest_0732 at 803.032 kb on - strand, within Psest_0732 at 803.402 kb on + strand at 803.478 kb on - strand at 803.478 kb on - strand at 803.784 kb on + strand, within Psest_0733 at 803.784 kb on + strand, within Psest_0733 at 803.785 kb on - strand, within Psest_0733 at 803.785 kb on - strand, within Psest_0733 at 803.785 kb on - strand, within Psest_0733 at 803.785 kb on - strand, within Psest_0733 at 803.964 kb on + strand, within Psest_0733 at 803.965 kb on - strand, within Psest_0733 at 804.221 kb on + strand, within Psest_0733 at 804.221 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.480 kb on + strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.481 kb on - strand, within Psest_0733 at 804.556 kb on - strand, within Psest_0733 at 804.556 kb on - strand, within Psest_0733 at 804.595 kb on + strand, within Psest_0733 at 804.596 kb on - strand, within Psest_0733 at 804.627 kb on + strand, within Psest_0733 at 804.627 kb on + strand, within Psest_0733 at 804.627 kb on + strand, within Psest_0733 at 804.628 kb on - strand, within Psest_0733 at 804.628 kb on - strand, within Psest_0733 at 804.774 kb on + strand, within Psest_0733 at 804.774 kb on + strand, within Psest_0733 at 804.789 kb on + strand, within Psest_0733 at 804.834 kb on + strand, within Psest_0733 at 804.884 kb on + strand, within Psest_0733 at 805.332 kb on + strand, within Psest_0733 at 805.332 kb on + strand, within Psest_0733 at 805.333 kb on - strand, within Psest_0733 at 805.399 kb on + strand, within Psest_0733 at 805.400 kb on - strand, within Psest_0733 at 805.500 kb on + strand, within Psest_0733 at 805.500 kb on + strand, within Psest_0733 at 805.500 kb on + strand, within Psest_0733 at 805.866 kb on + strand, within Psest_0733 at 805.878 kb on + strand, within Psest_0733 at 805.879 kb on - strand, within Psest_0733 at 806.240 kb on + strand at 806.278 kb on - strand at 806.278 kb on - strand at 806.430 kb on + strand, within Psest_0734 at 806.633 kb on - strand, within Psest_0734 at 806.674 kb on + strand, within Psest_0734 at 806.674 kb on + strand, within Psest_0734 at 806.674 kb on + strand, within Psest_0734 at 806.674 kb on + strand, within Psest_0734 at 807.119 kb on + strand, within Psest_0734 at 807.120 kb on - strand, within Psest_0734
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 803,031 + Psest_0732 0.85 +0.2 803,031 + Psest_0732 0.85 -1.0 803,032 - Psest_0732 0.85 -0.0 803,032 - Psest_0732 0.85 +0.5 803,402 + +1.0 803,478 - -0.0 803,478 - +1.0 803,784 + Psest_0733 0.18 -0.9 803,784 + Psest_0733 0.18 +1.5 803,785 - Psest_0733 0.18 -1.2 803,785 - Psest_0733 0.18 +1.5 803,785 - Psest_0733 0.18 +1.5 803,785 - Psest_0733 0.18 +2.0 803,964 + Psest_0733 0.23 +1.5 803,965 - Psest_0733 0.24 +1.8 804,221 + Psest_0733 0.32 +1.0 804,221 + Psest_0733 0.32 +1.3 804,480 + Psest_0733 0.40 +0.2 804,480 + Psest_0733 0.40 +1.4 804,480 + Psest_0733 0.40 -0.0 804,480 + Psest_0733 0.40 +1.5 804,480 + Psest_0733 0.40 -0.0 804,480 + Psest_0733 0.40 -0.5 804,480 + Psest_0733 0.40 +0.4 804,480 + Psest_0733 0.40 +0.5 804,480 + Psest_0733 0.40 +0.6 804,480 + Psest_0733 0.40 +2.8 804,480 + Psest_0733 0.40 +0.2 804,481 - Psest_0733 0.40 +0.2 804,481 - Psest_0733 0.40 +2.5 804,481 - Psest_0733 0.40 +0.5 804,481 - Psest_0733 0.40 +2.5 804,481 - Psest_0733 0.40 +1.5 804,481 - Psest_0733 0.40 +2.5 804,481 - Psest_0733 0.40 +2.5 804,481 - Psest_0733 0.40 +2.5 804,556 - Psest_0733 0.43 -0.2 804,556 - Psest_0733 0.43 -0.0 804,595 + Psest_0733 0.44 +0.2 804,596 - Psest_0733 0.44 +1.5 804,627 + Psest_0733 0.45 -0.5 804,627 + Psest_0733 0.45 +0.4 804,627 + Psest_0733 0.45 +1.3 804,628 - Psest_0733 0.45 +2.9 804,628 - Psest_0733 0.45 -0.3 804,774 + Psest_0733 0.50 +0.1 804,774 + Psest_0733 0.50 +1.2 804,789 + Psest_0733 0.51 +3.3 804,834 + Psest_0733 0.52 +2.5 804,884 + Psest_0733 0.54 +2.9 805,332 + Psest_0733 0.68 -1.0 805,332 + Psest_0733 0.68 +1.2 805,333 - Psest_0733 0.68 +0.6 805,399 + Psest_0733 0.71 +0.2 805,400 - Psest_0733 0.71 +2.5 805,500 + Psest_0733 0.74 +1.5 805,500 + Psest_0733 0.74 +1.5 805,500 + Psest_0733 0.74 -0.6 805,866 + Psest_0733 0.86 +0.4 805,878 + Psest_0733 0.86 +0.5 805,879 - Psest_0733 0.86 +2.5 806,240 + +0.5 806,278 - -0.6 806,278 - +1.5 806,430 + Psest_0734 0.12 +1.5 806,633 - Psest_0734 0.31 -0.3 806,674 + Psest_0734 0.35 +2.1 806,674 + Psest_0734 0.35 +1.1 806,674 + Psest_0734 0.35 -0.0 806,674 + Psest_0734 0.35 +2.5 807,119 + Psest_0734 0.76 +1.5 807,120 - Psest_0734 0.76 +0.2
Or see this region's nucleotide sequence