Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0067 and Psest_0068 are separated by 101 nucleotides Psest_0068 and Psest_0069 are separated by 79 nucleotides
Psest_0067: Psest_0067 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 67,502 to 68,500
_0067
Psest_0068: Psest_0068 - Amidases related to nicotinamidase, at 68,602 to 69,156
_0068
Psest_0069: Psest_0069 - UDP-glucose-4-epimerase, at 69,236 to 70,300
_0069
Position (kb)
68
69
70 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 67.699 kb on - strand, within Psest_0067 at 67.835 kb on + strand, within Psest_0067 at 67.917 kb on + strand, within Psest_0067 at 68.519 kb on - strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.645 kb on - strand at 68.645 kb on - strand at 69.136 kb on + strand at 69.136 kb on + strand at 69.210 kb on + strand at 69.210 kb on + strand at 69.210 kb on + strand at 69.606 kb on + strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.651 kb on + strand, within Psest_0069 at 69.651 kb on + strand, within Psest_0069 at 69.652 kb on - strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.671 kb on - strand, within Psest_0069 at 69.696 kb on + strand, within Psest_0069 at 69.696 kb on + strand, within Psest_0069 at 69.697 kb on - strand, within Psest_0069 at 69.697 kb on - strand, within Psest_0069 at 69.775 kb on - strand, within Psest_0069 at 69.775 kb on - strand, within Psest_0069
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 67,699 - Psest_0067 0.20 -0.3 67,835 + Psest_0067 0.33 +0.5 67,917 + Psest_0067 0.42 -0.3 68,519 - -1.3 68,559 + -0.5 68,559 + -1.8 68,559 + -0.3 68,559 + +0.6 68,559 + -0.1 68,559 + +0.7 68,559 + -2.0 68,559 + +1.1 68,559 + -0.5 68,559 + -0.9 68,559 + +0.1 68,559 + +1.4 68,559 + -2.3 68,559 + +1.0 68,559 + -0.5 68,560 - +3.6 68,560 - -1.7 68,560 - +1.2 68,560 - +2.2 68,560 - -2.2 68,560 - +0.3 68,560 - -2.0 68,560 - -0.8 68,560 - +0.7 68,560 - -0.6 68,560 - +0.4 68,560 - -1.0 68,560 - +2.6 68,560 - +1.4 68,560 - -2.6 68,560 - +0.0 68,645 - +0.2 68,645 - -0.7 69,136 + -2.1 69,136 + +0.0 69,210 + +0.0 69,210 + +0.7 69,210 + +0.5 69,606 + Psest_0069 0.35 +0.9 69,607 - Psest_0069 0.35 +1.0 69,607 - Psest_0069 0.35 -0.7 69,607 - Psest_0069 0.35 +1.1 69,607 - Psest_0069 0.35 -1.7 69,607 - Psest_0069 0.35 -0.5 69,607 - Psest_0069 0.35 +0.0 69,651 + Psest_0069 0.39 -1.8 69,651 + Psest_0069 0.39 -0.7 69,652 - Psest_0069 0.39 -0.3 69,670 + Psest_0069 0.41 -2.1 69,670 + Psest_0069 0.41 +0.7 69,670 + Psest_0069 0.41 -1.4 69,671 - Psest_0069 0.41 -0.5 69,696 + Psest_0069 0.43 -1.1 69,696 + Psest_0069 0.43 +0.3 69,697 - Psest_0069 0.43 +0.5 69,697 - Psest_0069 0.43 -0.5 69,775 - Psest_0069 0.51 +2.3 69,775 - Psest_0069 0.51 -0.0
Or see this region's nucleotide sequence