Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0677 and Psest_0678 are separated by 74 nucleotides Psest_0678 and Psest_0679 overlap by 13 nucleotides Psest_0679 and Psest_0680 overlap by 4 nucleotides
Psest_0677: Psest_0677 - iron-sulfur cluster binding protein, putative, at 739,197 to 740,270
_0677
Psest_0678: Psest_0678 - yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region, at 740,345 to 741,835
_0678
Psest_0679: Psest_0679 - ATPase, YjeE family, at 741,823 to 742,293
_0679
Psest_0680: Psest_0680 - N-acetylmuramoyl-L-alanine amidase, at 742,290 to 743,726
_0680
Position (kb) 740
741
742 Strain fitness (log2 ratio) -2
-1
0
1
2 at 739.537 kb on - strand, within Psest_0677 at 739.600 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 740.023 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.108 kb on - strand, within Psest_0677 at 740.108 kb on - strand, within Psest_0677 at 740.108 kb on - strand, within Psest_0677 at 740.303 kb on + strand at 740.303 kb on + strand at 740.304 kb on - strand at 740.304 kb on - strand at 740.304 kb on - strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.372 kb on + strand at 740.372 kb on + strand at 740.372 kb on + strand at 740.374 kb on + strand at 740.374 kb on + strand at 740.374 kb on + strand at 740.762 kb on + strand, within Psest_0678 at 741.251 kb on + strand, within Psest_0678 at 741.533 kb on + strand, within Psest_0678 at 741.565 kb on + strand, within Psest_0678 at 741.565 kb on + strand, within Psest_0678 at 741.841 kb on + strand at 742.289 kb on + strand at 742.289 kb on + strand at 742.289 kb on + strand at 742.295 kb on + strand at 742.295 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 739,537 - Psest_0677 0.32 -0.6 739,600 + Psest_0677 0.38 -0.8 739,969 + Psest_0677 0.72 +1.7 739,969 + Psest_0677 0.72 +2.0 739,969 + Psest_0677 0.72 +0.6 739,969 + Psest_0677 0.72 -0.0 739,970 - Psest_0677 0.72 -1.6 739,970 - Psest_0677 0.72 +2.6 739,970 - Psest_0677 0.72 -0.0 739,970 - Psest_0677 0.72 +2.4 739,970 - Psest_0677 0.72 -0.6 739,970 - Psest_0677 0.72 +0.3 739,970 - Psest_0677 0.72 -0.2 740,023 + Psest_0677 0.77 +0.2 740,107 + Psest_0677 0.85 +1.6 740,107 + Psest_0677 0.85 -1.0 740,107 + Psest_0677 0.85 +2.6 740,107 + Psest_0677 0.85 +1.6 740,107 + Psest_0677 0.85 +1.0 740,107 + Psest_0677 0.85 +2.6 740,107 + Psest_0677 0.85 +1.0 740,108 - Psest_0677 0.85 -0.4 740,108 - Psest_0677 0.85 -0.2 740,108 - Psest_0677 0.85 +0.4 740,303 + -0.4 740,303 + +1.6 740,304 - -1.8 740,304 - +0.6 740,304 - +0.6 740,305 + +1.0 740,305 + -0.0 740,305 + +1.6 740,305 + +2.6 740,305 + +1.6 740,305 + +1.6 740,372 + -0.4 740,372 + +2.6 740,372 + -0.4 740,374 + +0.6 740,374 + +2.6 740,374 + -1.0 740,762 + Psest_0678 0.28 +0.2 741,251 + Psest_0678 0.61 -0.4 741,533 + Psest_0678 0.80 +1.6 741,565 + Psest_0678 0.82 -2.5 741,565 + Psest_0678 0.82 -0.0 741,841 + -1.3 742,289 + -1.3 742,289 + +0.2 742,289 + +1.6 742,295 + -0.6 742,295 + -0.0
Or see this region's nucleotide sequence