Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0576 and Psest_0577 are separated by 166 nucleotides Psest_0577 and Psest_0578 are separated by 104 nucleotides Psest_0578 and Psest_0581 are separated by 636 nucleotides
Psest_0576: Psest_0576 - hypothetical protein, at 629,612 to 630,211
_0576
Psest_0577: Psest_0577 - Predicted transcriptional regulators, at 630,378 to 630,668
_0577
Psest_0578: Psest_0578 - hypothetical protein, at 630,773 to 631,219
_0578
Psest_0581: Psest_0581 - heavy metal response regulator, at 631,856 to 632,536
_0581
Position (kb) 630
631
632 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 629.783 kb on + strand, within Psest_0576 at 629.783 kb on + strand, within Psest_0576 at 629.819 kb on + strand, within Psest_0576 at 629.819 kb on + strand, within Psest_0576 at 629.820 kb on - strand, within Psest_0576 at 629.820 kb on - strand, within Psest_0576 at 629.866 kb on + strand, within Psest_0576 at 629.867 kb on - strand, within Psest_0576 at 629.880 kb on + strand, within Psest_0576 at 629.880 kb on + strand, within Psest_0576 at 629.881 kb on - strand, within Psest_0576 at 629.945 kb on + strand, within Psest_0576 at 629.945 kb on + strand, within Psest_0576 at 629.946 kb on - strand, within Psest_0576 at 629.946 kb on - strand, within Psest_0576 at 630.024 kb on + strand, within Psest_0576 at 630.024 kb on + strand, within Psest_0576 at 630.024 kb on + strand, within Psest_0576 at 630.024 kb on + strand, within Psest_0576 at 630.025 kb on - strand, within Psest_0576 at 630.025 kb on - strand, within Psest_0576 at 630.025 kb on - strand, within Psest_0576 at 630.025 kb on - strand, within Psest_0576 at 630.048 kb on + strand, within Psest_0576 at 630.048 kb on + strand, within Psest_0576 at 630.048 kb on + strand, within Psest_0576 at 630.048 kb on + strand, within Psest_0576 at 630.048 kb on + strand, within Psest_0576 at 630.048 kb on + strand, within Psest_0576 at 630.048 kb on + strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.049 kb on - strand, within Psest_0576 at 630.107 kb on - strand, within Psest_0576 at 630.110 kb on - strand, within Psest_0576 at 630.188 kb on + strand at 630.188 kb on + strand at 630.189 kb on - strand at 630.189 kb on - strand at 630.194 kb on - strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.211 kb on + strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.212 kb on - strand at 630.239 kb on + strand at 630.262 kb on + strand at 630.262 kb on + strand at 630.262 kb on + strand at 630.262 kb on + strand at 630.262 kb on + strand at 630.263 kb on - strand at 630.264 kb on + strand at 630.264 kb on + strand at 630.375 kb on + strand at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.466 kb on + strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.467 kb on - strand, within Psest_0577 at 630.575 kb on + strand, within Psest_0577 at 630.575 kb on + strand, within Psest_0577 at 630.575 kb on + strand, within Psest_0577 at 630.575 kb on + strand, within Psest_0577 at 630.575 kb on + strand, within Psest_0577 at 630.576 kb on - strand, within Psest_0577 at 630.576 kb on - strand, within Psest_0577 at 630.576 kb on - strand, within Psest_0577 at 630.617 kb on + strand, within Psest_0577 at 630.618 kb on - strand, within Psest_0577 at 630.748 kb on - strand at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.848 kb on + strand, within Psest_0578 at 630.849 kb on - strand, within Psest_0578 at 630.849 kb on - strand, within Psest_0578 at 630.849 kb on - strand, within Psest_0578 at 630.849 kb on - strand, within Psest_0578 at 630.849 kb on - strand, within Psest_0578 at 630.849 kb on - strand, within Psest_0578 at 630.858 kb on + strand, within Psest_0578 at 630.858 kb on + strand, within Psest_0578 at 630.858 kb on + strand, within Psest_0578 at 630.858 kb on + strand, within Psest_0578 at 630.859 kb on - strand, within Psest_0578 at 630.859 kb on - strand, within Psest_0578 at 630.859 kb on - strand, within Psest_0578 at 630.859 kb on - strand, within Psest_0578 at 630.882 kb on - strand, within Psest_0578 at 630.882 kb on - strand, within Psest_0578 at 630.882 kb on - strand, within Psest_0578 at 630.930 kb on + strand, within Psest_0578 at 630.966 kb on + strand, within Psest_0578 at 630.967 kb on - strand, within Psest_0578 at 631.024 kb on + strand, within Psest_0578 at 631.024 kb on + strand, within Psest_0578 at 631.024 kb on + strand, within Psest_0578 at 631.025 kb on - strand, within Psest_0578 at 631.137 kb on - strand, within Psest_0578 at 631.137 kb on - strand, within Psest_0578 at 631.174 kb on + strand, within Psest_0578 at 631.174 kb on + strand, within Psest_0578 at 631.174 kb on + strand, within Psest_0578 at 631.174 kb on + strand, within Psest_0578 at 631.175 kb on - strand at 631.175 kb on - strand at 631.175 kb on - strand at 631.178 kb on - strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.203 kb on + strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.204 kb on - strand at 631.244 kb on + strand at 631.353 kb on + strand at 631.353 kb on + strand at 631.354 kb on - strand at 631.354 kb on - strand at 631.354 kb on - strand at 631.416 kb on - strand at 631.527 kb on - strand at 631.527 kb on - strand at 631.527 kb on - strand at 631.527 kb on - strand at 631.527 kb on - strand at 631.527 kb on - strand at 631.534 kb on - strand at 631.534 kb on - strand at 631.577 kb on + strand at 631.577 kb on + strand at 631.577 kb on + strand at 631.577 kb on + strand at 631.687 kb on + strand at 631.687 kb on + strand at 631.687 kb on + strand at 631.688 kb on - strand at 631.705 kb on + strand at 631.714 kb on - strand at 631.714 kb on - strand at 631.882 kb on - strand at 631.904 kb on + strand at 631.904 kb on + strand at 631.904 kb on + strand at 631.905 kb on - strand at 631.912 kb on + strand at 631.912 kb on + strand at 631.912 kb on + strand at 631.912 kb on + strand at 631.913 kb on - strand at 631.913 kb on - strand at 631.913 kb on - strand at 631.913 kb on - strand at 631.913 kb on - strand at 631.913 kb on - strand at 631.913 kb on - strand at 631.913 kb on - strand at 631.913 kb on - strand at 632.001 kb on - strand, within Psest_0581 at 632.001 kb on - strand, within Psest_0581 at 632.051 kb on + strand, within Psest_0581 at 632.052 kb on - strand, within Psest_0581 at 632.052 kb on - strand, within Psest_0581 at 632.054 kb on + strand, within Psest_0581 at 632.054 kb on + strand, within Psest_0581 at 632.054 kb on + strand, within Psest_0581 at 632.054 kb on + strand, within Psest_0581 at 632.055 kb on - strand, within Psest_0581 at 632.055 kb on - strand, within Psest_0581 at 632.055 kb on - strand, within Psest_0581 at 632.055 kb on - strand, within Psest_0581 at 632.084 kb on + strand, within Psest_0581 at 632.084 kb on + strand, within Psest_0581 at 632.085 kb on - strand, within Psest_0581 at 632.085 kb on - strand, within Psest_0581 at 632.085 kb on - strand, within Psest_0581 at 632.085 kb on - strand, within Psest_0581 at 632.085 kb on - strand, within Psest_0581 at 632.091 kb on - strand, within Psest_0581 at 632.091 kb on - strand, within Psest_0581 at 632.091 kb on - strand, within Psest_0581 at 632.091 kb on - strand, within Psest_0581 at 632.110 kb on + strand, within Psest_0581 at 632.110 kb on + strand, within Psest_0581 at 632.176 kb on + strand, within Psest_0581 at 632.176 kb on + strand, within Psest_0581 at 632.177 kb on - strand, within Psest_0581 at 632.177 kb on - strand, within Psest_0581 at 632.197 kb on + strand, within Psest_0581 at 632.197 kb on + strand, within Psest_0581 at 632.197 kb on + strand, within Psest_0581
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 629,783 + Psest_0576 0.28 -1.2 629,783 + Psest_0576 0.28 +0.3 629,819 + Psest_0576 0.34 -2.4 629,819 + Psest_0576 0.34 -2.3 629,820 - Psest_0576 0.35 +2.6 629,820 - Psest_0576 0.35 +1.6 629,866 + Psest_0576 0.42 -1.3 629,867 - Psest_0576 0.42 +1.6 629,880 + Psest_0576 0.45 +1.6 629,880 + Psest_0576 0.45 +1.9 629,881 - Psest_0576 0.45 +2.6 629,945 + Psest_0576 0.56 +1.6 629,945 + Psest_0576 0.56 -0.7 629,946 - Psest_0576 0.56 +1.1 629,946 - Psest_0576 0.56 +0.8 630,024 + Psest_0576 0.69 +0.1 630,024 + Psest_0576 0.69 +1.6 630,024 + Psest_0576 0.69 +0.1 630,024 + Psest_0576 0.69 -2.0 630,025 - Psest_0576 0.69 +0.3 630,025 - Psest_0576 0.69 +0.3 630,025 - Psest_0576 0.69 -0.2 630,025 - Psest_0576 0.69 +1.6 630,048 + Psest_0576 0.73 +2.1 630,048 + Psest_0576 0.73 +1.4 630,048 + Psest_0576 0.73 -2.7 630,048 + Psest_0576 0.73 +1.1 630,048 + Psest_0576 0.73 -1.9 630,048 + Psest_0576 0.73 +0.1 630,048 + Psest_0576 0.73 +0.6 630,049 - Psest_0576 0.73 +2.6 630,049 - Psest_0576 0.73 +1.1 630,049 - Psest_0576 0.73 +1.6 630,049 - Psest_0576 0.73 +0.4 630,049 - Psest_0576 0.73 -1.8 630,049 - Psest_0576 0.73 +0.6 630,049 - Psest_0576 0.73 +2.2 630,049 - Psest_0576 0.73 +0.6 630,049 - Psest_0576 0.73 +1.1 630,107 - Psest_0576 0.82 -0.9 630,110 - Psest_0576 0.83 +0.3 630,188 + +0.0 630,188 + +0.3 630,189 - -1.9 630,189 - +0.1 630,194 - +1.6 630,211 + +0.3 630,211 + +1.1 630,211 + -0.5 630,211 + +2.1 630,211 + +1.9 630,211 + -1.1 630,211 + -0.7 630,211 + -1.4 630,211 + +0.1 630,211 + +1.4 630,211 + -0.7 630,211 + +0.9 630,211 + -0.3 630,211 + +0.3 630,211 + +1.4 630,211 + -0.8 630,211 + +0.1 630,212 - -0.4 630,212 - -1.7 630,212 - -0.7 630,212 - -0.4 630,212 - -0.4 630,212 - -0.2 630,212 - +0.1 630,212 - +1.1 630,212 - +1.6 630,212 - +1.5 630,212 - -0.5 630,212 - +1.1 630,212 - +2.1 630,212 - +1.5 630,212 - +1.1 630,212 - +0.4 630,212 - -1.1 630,212 - +1.1 630,212 - -0.7 630,212 - -0.5 630,212 - +2.4 630,239 + +1.6 630,262 + -0.7 630,262 + -0.5 630,262 + -0.9 630,262 + -1.8 630,262 + -0.2 630,263 - +0.6 630,264 + +0.3 630,264 + +2.6 630,375 + +2.2 630,466 + Psest_0577 0.30 -1.1 630,466 + Psest_0577 0.30 -2.2 630,466 + Psest_0577 0.30 -0.8 630,466 + Psest_0577 0.30 +0.6 630,466 + Psest_0577 0.30 -2.9 630,466 + Psest_0577 0.30 -0.7 630,466 + Psest_0577 0.30 +0.1 630,466 + Psest_0577 0.30 +0.7 630,466 + Psest_0577 0.30 -0.4 630,467 - Psest_0577 0.31 +0.6 630,467 - Psest_0577 0.31 -0.2 630,467 - Psest_0577 0.31 +1.6 630,467 - Psest_0577 0.31 -1.4 630,467 - Psest_0577 0.31 -1.6 630,467 - Psest_0577 0.31 +1.1 630,467 - Psest_0577 0.31 +0.6 630,467 - Psest_0577 0.31 +1.1 630,467 - Psest_0577 0.31 +1.6 630,467 - Psest_0577 0.31 -0.4 630,575 + Psest_0577 0.68 -0.3 630,575 + Psest_0577 0.68 -3.2 630,575 + Psest_0577 0.68 +1.1 630,575 + Psest_0577 0.68 +1.1 630,575 + Psest_0577 0.68 -0.9 630,576 - Psest_0577 0.68 +0.1 630,576 - Psest_0577 0.68 -1.8 630,576 - Psest_0577 0.68 -0.2 630,617 + Psest_0577 0.82 +0.0 630,618 - Psest_0577 0.82 -0.8 630,748 - -0.5 630,848 + Psest_0578 0.17 +0.8 630,848 + Psest_0578 0.17 -0.4 630,848 + Psest_0578 0.17 +1.1 630,848 + Psest_0578 0.17 -2.4 630,848 + Psest_0578 0.17 -0.1 630,848 + Psest_0578 0.17 -0.2 630,848 + Psest_0578 0.17 -2.6 630,848 + Psest_0578 0.17 +0.1 630,848 + Psest_0578 0.17 +0.1 630,848 + Psest_0578 0.17 -2.1 630,848 + Psest_0578 0.17 -0.4 630,848 + Psest_0578 0.17 -0.8 630,848 + Psest_0578 0.17 +1.1 630,848 + Psest_0578 0.17 +0.8 630,848 + Psest_0578 0.17 +0.2 630,848 + Psest_0578 0.17 -1.7 630,848 + Psest_0578 0.17 +0.1 630,849 - Psest_0578 0.17 -0.2 630,849 - Psest_0578 0.17 -0.2 630,849 - Psest_0578 0.17 -0.4 630,849 - Psest_0578 0.17 -0.7 630,849 - Psest_0578 0.17 +0.7 630,849 - Psest_0578 0.17 -0.2 630,858 + Psest_0578 0.19 -0.8 630,858 + Psest_0578 0.19 -0.9 630,858 + Psest_0578 0.19 -0.6 630,858 + Psest_0578 0.19 -1.5 630,859 - Psest_0578 0.19 -0.4 630,859 - Psest_0578 0.19 -0.2 630,859 - Psest_0578 0.19 -1.4 630,859 - Psest_0578 0.19 -0.2 630,882 - Psest_0578 0.24 +0.3 630,882 - Psest_0578 0.24 -2.4 630,882 - Psest_0578 0.24 -0.4 630,930 + Psest_0578 0.35 -1.4 630,966 + Psest_0578 0.43 -1.2 630,967 - Psest_0578 0.43 -0.3 631,024 + Psest_0578 0.56 -0.1 631,024 + Psest_0578 0.56 -0.5 631,024 + Psest_0578 0.56 -0.4 631,025 - Psest_0578 0.56 +1.6 631,137 - Psest_0578 0.81 +1.0 631,137 - Psest_0578 0.81 -0.2 631,174 + Psest_0578 0.90 -0.5 631,174 + Psest_0578 0.90 -0.9 631,174 + Psest_0578 0.90 -0.5 631,174 + Psest_0578 0.90 -0.7 631,175 - -0.8 631,175 - -2.7 631,175 - -1.3 631,178 - -1.5 631,203 + +0.3 631,203 + +0.3 631,203 + -0.7 631,203 + -1.2 631,203 + -0.2 631,203 + -1.4 631,203 + +0.4 631,203 + -0.2 631,203 + -0.4 631,203 + -0.2 631,203 + -1.5 631,203 + -1.7 631,203 + -1.3 631,203 + +0.4 631,204 - -2.0 631,204 - -0.4 631,204 - +2.9 631,204 - +3.9 631,204 - +0.1 631,204 - -0.5 631,204 - +1.2 631,204 - -1.6 631,204 - -0.8 631,204 - -0.5 631,204 - -0.8 631,204 - +0.3 631,204 - +1.1 631,244 + +0.4 631,353 + +1.1 631,353 + -0.2 631,354 - -0.2 631,354 - -0.5 631,354 - +0.6 631,416 - +0.5 631,527 - +0.1 631,527 - -1.2 631,527 - -0.8 631,527 - +0.4 631,527 - -0.8 631,527 - +1.1 631,534 - -1.9 631,534 - +0.8 631,577 + -0.4 631,577 + -0.9 631,577 + -1.4 631,577 + -0.4 631,687 + -1.8 631,687 + +0.5 631,687 + -0.7 631,688 - -0.4 631,705 + +0.6 631,714 - -1.4 631,714 - -1.5 631,882 - -1.1 631,904 + +2.1 631,904 + +0.6 631,904 + -0.7 631,905 - +0.3 631,912 + +0.8 631,912 + -0.9 631,912 + +1.9 631,912 + -3.0 631,913 - +0.6 631,913 - +1.5 631,913 - -1.9 631,913 - +1.1 631,913 - -0.2 631,913 - +0.6 631,913 - -0.7 631,913 - +1.0 631,913 - -0.5 632,001 - Psest_0581 0.21 +0.9 632,001 - Psest_0581 0.21 -0.4 632,051 + Psest_0581 0.29 -0.8 632,052 - Psest_0581 0.29 +1.1 632,052 - Psest_0581 0.29 +0.2 632,054 + Psest_0581 0.29 -1.1 632,054 + Psest_0581 0.29 -0.4 632,054 + Psest_0581 0.29 +0.1 632,054 + Psest_0581 0.29 -1.3 632,055 - Psest_0581 0.29 -0.9 632,055 - Psest_0581 0.29 +1.9 632,055 - Psest_0581 0.29 +0.6 632,055 - Psest_0581 0.29 +2.2 632,084 + Psest_0581 0.33 -1.4 632,084 + Psest_0581 0.33 -0.8 632,085 - Psest_0581 0.34 -0.8 632,085 - Psest_0581 0.34 +2.2 632,085 - Psest_0581 0.34 -0.6 632,085 - Psest_0581 0.34 +0.6 632,085 - Psest_0581 0.34 +0.6 632,091 - Psest_0581 0.35 -1.4 632,091 - Psest_0581 0.35 -1.1 632,091 - Psest_0581 0.35 +1.6 632,091 - Psest_0581 0.35 -2.1 632,110 + Psest_0581 0.37 -1.7 632,110 + Psest_0581 0.37 +0.9 632,176 + Psest_0581 0.47 +0.1 632,176 + Psest_0581 0.47 -0.4 632,177 - Psest_0581 0.47 -2.2 632,177 - Psest_0581 0.47 -0.2 632,197 + Psest_0581 0.50 -3.4 632,197 + Psest_0581 0.50 +1.9 632,197 + Psest_0581 0.50 +1.3
Or see this region's nucleotide sequence