Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3856 and Psest_3857 are separated by 27 nucleotides Psest_3857 and Psest_3858 are separated by 86 nucleotides Psest_3858 and Psest_3859 are separated by 103 nucleotides
Psest_3856: Psest_3856 - ABC-type branched-chain amino acid transport system, permease component, at 4,027,925 to 4,028,911
_3856
Psest_3857: Psest_3857 - ATPases involved in chromosome partitioning, at 4,028,939 to 4,029,712
_3857
Psest_3858: Psest_3858 - thymidylate synthase, at 4,029,799 to 4,030,593
_3858
Psest_3859: Psest_3859 - prolipoprotein diacylglyceryl transferase, at 4,030,697 to 4,031,497
_3859
Position (kb)
4028
4029
4030 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4028.030 kb on + strand, within Psest_3856 at 4028.030 kb on + strand, within Psest_3856 at 4028.031 kb on - strand, within Psest_3856 at 4028.106 kb on - strand, within Psest_3856 at 4028.156 kb on + strand, within Psest_3856 at 4028.157 kb on - strand, within Psest_3856 at 4028.283 kb on - strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.423 kb on + strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.424 kb on - strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.429 kb on + strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.430 kb on - strand, within Psest_3856 at 4028.439 kb on + strand, within Psest_3856 at 4028.439 kb on + strand, within Psest_3856 at 4028.439 kb on + strand, within Psest_3856 at 4028.568 kb on - strand, within Psest_3856 at 4028.768 kb on + strand, within Psest_3856 at 4028.768 kb on + strand, within Psest_3856 at 4028.768 kb on + strand, within Psest_3856 at 4028.768 kb on + strand, within Psest_3856 at 4028.769 kb on - strand, within Psest_3856 at 4028.769 kb on - strand, within Psest_3856 at 4028.769 kb on - strand, within Psest_3856 at 4028.769 kb on - strand, within Psest_3856 at 4028.864 kb on + strand at 4028.864 kb on + strand at 4028.864 kb on + strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4029.010 kb on - strand at 4029.023 kb on - strand, within Psest_3857 at 4029.023 kb on - strand, within Psest_3857 at 4029.222 kb on + strand, within Psest_3857 at 4029.222 kb on + strand, within Psest_3857 at 4029.300 kb on + strand, within Psest_3857 at 4029.301 kb on - strand, within Psest_3857 at 4029.342 kb on + strand, within Psest_3857 at 4029.342 kb on + strand, within Psest_3857 at 4029.343 kb on - strand, within Psest_3857 at 4029.343 kb on - strand, within Psest_3857 at 4029.577 kb on - strand, within Psest_3857 at 4029.748 kb on - strand at 4029.748 kb on - strand at 4030.643 kb on - strand at 4030.643 kb on - strand at 4030.643 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 4,028,030 + Psest_3856 0.11 +0.1 4,028,030 + Psest_3856 0.11 +1.8 4,028,031 - Psest_3856 0.11 -1.9 4,028,106 - Psest_3856 0.18 +1.4 4,028,156 + Psest_3856 0.23 +0.7 4,028,157 - Psest_3856 0.24 +0.4 4,028,283 - Psest_3856 0.36 -2.0 4,028,423 + Psest_3856 0.50 -2.7 4,028,423 + Psest_3856 0.50 +0.9 4,028,423 + Psest_3856 0.50 -0.6 4,028,423 + Psest_3856 0.50 -3.2 4,028,423 + Psest_3856 0.50 +0.0 4,028,423 + Psest_3856 0.50 -0.3 4,028,423 + Psest_3856 0.50 -1.1 4,028,423 + Psest_3856 0.50 -0.5 4,028,423 + Psest_3856 0.50 -1.6 4,028,423 + Psest_3856 0.50 +2.9 4,028,423 + Psest_3856 0.50 +0.4 4,028,423 + Psest_3856 0.50 +1.1 4,028,423 + Psest_3856 0.50 -1.9 4,028,424 - Psest_3856 0.51 -0.4 4,028,424 - Psest_3856 0.51 +1.9 4,028,424 - Psest_3856 0.51 +0.6 4,028,424 - Psest_3856 0.51 -1.1 4,028,424 - Psest_3856 0.51 -1.0 4,028,424 - Psest_3856 0.51 -1.6 4,028,424 - Psest_3856 0.51 -1.1 4,028,424 - Psest_3856 0.51 -0.4 4,028,424 - Psest_3856 0.51 -0.7 4,028,424 - Psest_3856 0.51 +0.8 4,028,424 - Psest_3856 0.51 -2.1 4,028,424 - Psest_3856 0.51 -2.8 4,028,424 - Psest_3856 0.51 -1.4 4,028,424 - Psest_3856 0.51 -2.0 4,028,424 - Psest_3856 0.51 -2.3 4,028,424 - Psest_3856 0.51 +0.3 4,028,424 - Psest_3856 0.51 -1.3 4,028,424 - Psest_3856 0.51 -0.4 4,028,424 - Psest_3856 0.51 +0.9 4,028,429 + Psest_3856 0.51 -0.6 4,028,429 + Psest_3856 0.51 -0.4 4,028,429 + Psest_3856 0.51 -0.1 4,028,429 + Psest_3856 0.51 +0.0 4,028,429 + Psest_3856 0.51 -0.7 4,028,429 + Psest_3856 0.51 -0.3 4,028,429 + Psest_3856 0.51 -0.6 4,028,429 + Psest_3856 0.51 -2.6 4,028,429 + Psest_3856 0.51 -1.7 4,028,429 + Psest_3856 0.51 -1.6 4,028,429 + Psest_3856 0.51 +1.4 4,028,429 + Psest_3856 0.51 +0.3 4,028,429 + Psest_3856 0.51 -1.6 4,028,429 + Psest_3856 0.51 -1.2 4,028,430 - Psest_3856 0.51 +0.6 4,028,430 - Psest_3856 0.51 +0.1 4,028,430 - Psest_3856 0.51 -0.3 4,028,430 - Psest_3856 0.51 +0.9 4,028,430 - Psest_3856 0.51 -1.0 4,028,430 - Psest_3856 0.51 +0.7 4,028,430 - Psest_3856 0.51 -0.7 4,028,430 - Psest_3856 0.51 -1.1 4,028,430 - Psest_3856 0.51 -1.1 4,028,439 + Psest_3856 0.52 -2.7 4,028,439 + Psest_3856 0.52 -1.2 4,028,439 + Psest_3856 0.52 +2.2 4,028,568 - Psest_3856 0.65 -1.5 4,028,768 + Psest_3856 0.85 -0.6 4,028,768 + Psest_3856 0.85 +0.4 4,028,768 + Psest_3856 0.85 -2.4 4,028,768 + Psest_3856 0.85 -0.6 4,028,769 - Psest_3856 0.86 -0.1 4,028,769 - Psest_3856 0.86 -1.0 4,028,769 - Psest_3856 0.86 +0.2 4,028,769 - Psest_3856 0.86 +3.2 4,028,864 + -2.3 4,028,864 + +1.0 4,028,864 + -1.0 4,028,865 - -1.5 4,028,865 - -0.5 4,028,865 - +1.2 4,028,865 - -1.5 4,028,865 - -0.3 4,028,865 - -0.3 4,028,865 - +0.4 4,029,010 - -2.2 4,029,023 - Psest_3857 0.11 +0.9 4,029,023 - Psest_3857 0.11 +1.2 4,029,222 + Psest_3857 0.37 -2.5 4,029,222 + Psest_3857 0.37 -1.3 4,029,300 + Psest_3857 0.47 -1.6 4,029,301 - Psest_3857 0.47 -1.4 4,029,342 + Psest_3857 0.52 +0.3 4,029,342 + Psest_3857 0.52 +0.3 4,029,343 - Psest_3857 0.52 -0.4 4,029,343 - Psest_3857 0.52 +2.4 4,029,577 - Psest_3857 0.82 -0.1 4,029,748 - -1.7 4,029,748 - +2.4 4,030,643 - -0.5 4,030,643 - -1.2 4,030,643 - -0.4 4,030,646 - -1.9 4,030,646 - -0.2 4,030,646 - -1.0 4,030,646 - -0.9
Or see this region's nucleotide sequence