Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3731 and Psest_3732 are separated by 105 nucleotides Psest_3732 and Psest_3733 are separated by 19 nucleotides
Psest_3731: Psest_3731 - exopolyphosphatase, at 3,902,546 to 3,904,048
_3731
Psest_3732: Psest_3732 - polyphosphate kinase 1, at 3,904,154 to 3,906,370
_3732
Psest_3733: Psest_3733 - Delta-aminolevulinic acid dehydratase, at 3,906,390 to 3,907,403
_3733
Position (kb)
3904
3905
3906
3907 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3903.184 kb on + strand, within Psest_3731 at 3903.184 kb on + strand, within Psest_3731 at 3903.184 kb on + strand, within Psest_3731 at 3903.184 kb on + strand, within Psest_3731 at 3903.184 kb on + strand, within Psest_3731 at 3903.184 kb on + strand, within Psest_3731 at 3903.185 kb on - strand, within Psest_3731 at 3903.185 kb on - strand, within Psest_3731 at 3903.185 kb on - strand, within Psest_3731 at 3903.185 kb on - strand, within Psest_3731 at 3903.185 kb on - strand, within Psest_3731 at 3903.185 kb on - strand, within Psest_3731 at 3903.355 kb on - strand, within Psest_3731 at 3903.452 kb on + strand, within Psest_3731 at 3903.453 kb on - strand, within Psest_3731 at 3903.521 kb on + strand, within Psest_3731 at 3903.677 kb on + strand, within Psest_3731 at 3903.677 kb on + strand, within Psest_3731 at 3903.677 kb on + strand, within Psest_3731 at 3903.677 kb on + strand, within Psest_3731 at 3903.678 kb on - strand, within Psest_3731 at 3903.678 kb on - strand, within Psest_3731 at 3903.678 kb on - strand, within Psest_3731 at 3903.678 kb on - strand, within Psest_3731 at 3903.684 kb on - strand, within Psest_3731 at 3903.788 kb on - strand, within Psest_3731 at 3903.788 kb on - strand, within Psest_3731 at 3903.799 kb on + strand, within Psest_3731 at 3903.799 kb on + strand, within Psest_3731 at 3903.799 kb on + strand, within Psest_3731 at 3903.800 kb on - strand, within Psest_3731 at 3903.909 kb on + strand at 3903.910 kb on - strand at 3904.029 kb on - strand at 3904.248 kb on + strand at 3904.407 kb on + strand, within Psest_3732 at 3904.407 kb on + strand, within Psest_3732 at 3904.408 kb on - strand, within Psest_3732 at 3904.437 kb on + strand, within Psest_3732 at 3904.437 kb on + strand, within Psest_3732 at 3904.438 kb on - strand, within Psest_3732 at 3904.578 kb on + strand, within Psest_3732 at 3904.579 kb on - strand, within Psest_3732 at 3904.579 kb on - strand, within Psest_3732 at 3904.579 kb on - strand, within Psest_3732 at 3904.630 kb on + strand, within Psest_3732 at 3904.631 kb on - strand, within Psest_3732 at 3904.816 kb on - strand, within Psest_3732 at 3904.824 kb on + strand, within Psest_3732 at 3904.824 kb on + strand, within Psest_3732 at 3904.824 kb on + strand, within Psest_3732 at 3904.848 kb on + strand, within Psest_3732 at 3904.849 kb on - strand, within Psest_3732 at 3904.947 kb on + strand, within Psest_3732 at 3904.947 kb on + strand, within Psest_3732 at 3904.948 kb on - strand, within Psest_3732 at 3904.948 kb on - strand, within Psest_3732 at 3904.948 kb on - strand, within Psest_3732 at 3905.106 kb on + strand, within Psest_3732 at 3905.283 kb on + strand, within Psest_3732 at 3905.283 kb on + strand, within Psest_3732 at 3905.284 kb on - strand, within Psest_3732 at 3905.284 kb on - strand, within Psest_3732 at 3905.284 kb on - strand, within Psest_3732 at 3905.358 kb on + strand, within Psest_3732 at 3905.841 kb on + strand, within Psest_3732 at 3906.207 kb on + strand at 3906.207 kb on + strand at 3906.207 kb on + strand at 3906.207 kb on + strand at 3906.208 kb on - strand at 3906.208 kb on - strand at 3906.208 kb on - strand at 3906.208 kb on - strand at 3906.208 kb on - strand at 3906.405 kb on + strand at 3906.405 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 3,903,184 + Psest_3731 0.42 -1.9 3,903,184 + Psest_3731 0.42 +0.9 3,903,184 + Psest_3731 0.42 -0.4 3,903,184 + Psest_3731 0.42 +1.3 3,903,184 + Psest_3731 0.42 -1.6 3,903,184 + Psest_3731 0.42 +0.1 3,903,185 - Psest_3731 0.43 +0.8 3,903,185 - Psest_3731 0.43 -1.9 3,903,185 - Psest_3731 0.43 -0.5 3,903,185 - Psest_3731 0.43 +1.0 3,903,185 - Psest_3731 0.43 -3.1 3,903,185 - Psest_3731 0.43 +0.3 3,903,355 - Psest_3731 0.54 -1.4 3,903,452 + Psest_3731 0.60 -0.7 3,903,453 - Psest_3731 0.60 -0.1 3,903,521 + Psest_3731 0.65 +0.8 3,903,677 + Psest_3731 0.75 -0.5 3,903,677 + Psest_3731 0.75 -0.7 3,903,677 + Psest_3731 0.75 -0.4 3,903,677 + Psest_3731 0.75 +0.9 3,903,678 - Psest_3731 0.75 -1.9 3,903,678 - Psest_3731 0.75 -2.0 3,903,678 - Psest_3731 0.75 -0.8 3,903,678 - Psest_3731 0.75 +0.8 3,903,684 - Psest_3731 0.76 -0.5 3,903,788 - Psest_3731 0.83 +0.2 3,903,788 - Psest_3731 0.83 -0.2 3,903,799 + Psest_3731 0.83 -1.5 3,903,799 + Psest_3731 0.83 -2.0 3,903,799 + Psest_3731 0.83 -1.4 3,903,800 - Psest_3731 0.83 +0.4 3,903,909 + +0.9 3,903,910 - +0.2 3,904,029 - +0.6 3,904,248 + -0.2 3,904,407 + Psest_3732 0.11 -1.8 3,904,407 + Psest_3732 0.11 +0.9 3,904,408 - Psest_3732 0.11 -1.9 3,904,437 + Psest_3732 0.13 -0.5 3,904,437 + Psest_3732 0.13 -1.9 3,904,438 - Psest_3732 0.13 -1.2 3,904,578 + Psest_3732 0.19 -1.4 3,904,579 - Psest_3732 0.19 -1.2 3,904,579 - Psest_3732 0.19 -1.7 3,904,579 - Psest_3732 0.19 -1.8 3,904,630 + Psest_3732 0.21 -1.5 3,904,631 - Psest_3732 0.22 -2.2 3,904,816 - Psest_3732 0.30 +0.5 3,904,824 + Psest_3732 0.30 -3.5 3,904,824 + Psest_3732 0.30 -1.4 3,904,824 + Psest_3732 0.30 -1.5 3,904,848 + Psest_3732 0.31 -1.4 3,904,849 - Psest_3732 0.31 -1.8 3,904,947 + Psest_3732 0.36 +0.1 3,904,947 + Psest_3732 0.36 -2.7 3,904,948 - Psest_3732 0.36 -3.1 3,904,948 - Psest_3732 0.36 -0.4 3,904,948 - Psest_3732 0.36 -0.4 3,905,106 + Psest_3732 0.43 -1.0 3,905,283 + Psest_3732 0.51 +1.4 3,905,283 + Psest_3732 0.51 +1.2 3,905,284 - Psest_3732 0.51 -3.4 3,905,284 - Psest_3732 0.51 +0.5 3,905,284 - Psest_3732 0.51 -1.7 3,905,358 + Psest_3732 0.54 -0.4 3,905,841 + Psest_3732 0.76 +1.5 3,906,207 + -0.9 3,906,207 + -0.1 3,906,207 + -3.4 3,906,207 + -0.5 3,906,208 - -2.5 3,906,208 - -2.1 3,906,208 - -3.1 3,906,208 - +0.7 3,906,208 - +3.0 3,906,405 + -0.1 3,906,405 + -1.0
Or see this region's nucleotide sequence