Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3674 and Psest_3675 are separated by 95 nucleotides Psest_3675 and Psest_3676 are separated by 6 nucleotides Psest_3676 and Psest_3677 overlap by 10 nucleotides Psest_3677 and Psest_3678 are separated by 75 nucleotides
Psest_3674: Psest_3674 - Uncharacterized conserved protein, at 3,838,535 to 3,840,082
_3674
Psest_3675: Psest_3675 - tRNA nucleotidyltransferase/poly(A) polymerase, at 3,840,178 to 3,841,347
_3675
Psest_3676: Psest_3676 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 3,841,354 to 3,841,896
_3676
Psest_3677: Psest_3677 - dihydroneopterin aldolase, at 3,841,887 to 3,842,240
_3677
Psest_3678: Psest_3678 - acyl-phosphate glycerol 3-phosphate acyltransferase, at 3,842,316 to 3,842,885
_3678
Position (kb)
3840
3841
3842 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3839.246 kb on + strand, within Psest_3674 at 3839.246 kb on + strand, within Psest_3674 at 3839.246 kb on + strand, within Psest_3674 at 3839.247 kb on - strand, within Psest_3674 at 3839.247 kb on - strand, within Psest_3674 at 3839.324 kb on + strand, within Psest_3674 at 3839.324 kb on + strand, within Psest_3674 at 3839.324 kb on + strand, within Psest_3674 at 3839.325 kb on - strand, within Psest_3674 at 3839.325 kb on - strand, within Psest_3674 at 3839.325 kb on - strand, within Psest_3674 at 3839.330 kb on + strand, within Psest_3674 at 3839.385 kb on - strand, within Psest_3674 at 3839.385 kb on - strand, within Psest_3674 at 3839.385 kb on - strand, within Psest_3674 at 3839.385 kb on - strand, within Psest_3674 at 3839.385 kb on - strand, within Psest_3674 at 3839.405 kb on + strand, within Psest_3674 at 3839.406 kb on - strand, within Psest_3674 at 3839.471 kb on + strand, within Psest_3674 at 3839.496 kb on - strand, within Psest_3674 at 3839.498 kb on + strand, within Psest_3674 at 3839.498 kb on + strand, within Psest_3674 at 3839.498 kb on + strand, within Psest_3674 at 3839.498 kb on + strand, within Psest_3674 at 3839.498 kb on + strand, within Psest_3674 at 3839.499 kb on - strand, within Psest_3674 at 3839.499 kb on - strand, within Psest_3674 at 3839.499 kb on - strand, within Psest_3674 at 3839.516 kb on + strand, within Psest_3674 at 3839.517 kb on - strand, within Psest_3674 at 3839.537 kb on + strand, within Psest_3674 at 3839.537 kb on + strand, within Psest_3674 at 3839.537 kb on + strand, within Psest_3674 at 3839.538 kb on - strand, within Psest_3674 at 3839.538 kb on - strand, within Psest_3674 at 3839.538 kb on - strand, within Psest_3674 at 3839.538 kb on - strand, within Psest_3674 at 3839.538 kb on - strand, within Psest_3674 at 3839.538 kb on - strand, within Psest_3674 at 3839.538 kb on - strand, within Psest_3674 at 3839.810 kb on + strand, within Psest_3674 at 3839.810 kb on + strand, within Psest_3674 at 3839.810 kb on + strand, within Psest_3674 at 3839.810 kb on + strand, within Psest_3674 at 3839.810 kb on + strand, within Psest_3674 at 3839.811 kb on - strand, within Psest_3674 at 3839.811 kb on - strand, within Psest_3674 at 3839.811 kb on - strand, within Psest_3674 at 3839.811 kb on - strand, within Psest_3674 at 3839.811 kb on - strand, within Psest_3674 at 3839.811 kb on - strand, within Psest_3674 at 3839.935 kb on - strand at 3839.935 kb on - strand at 3839.935 kb on - strand at 3840.096 kb on + strand at 3840.097 kb on - strand at 3840.097 kb on - strand at 3840.152 kb on + strand at 3840.177 kb on + strand at 3840.187 kb on + strand at 3840.187 kb on + strand at 3840.187 kb on + strand at 3840.187 kb on + strand at 3840.187 kb on + strand at 3840.187 kb on + strand at 3841.325 kb on - strand at 3841.325 kb on - strand at 3841.325 kb on - strand at 3841.345 kb on + strand at 3841.345 kb on + strand at 3841.345 kb on + strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.346 kb on - strand at 3841.465 kb on + strand, within Psest_3676
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 3,839,246 + Psest_3674 0.46 -0.8 3,839,246 + Psest_3674 0.46 -3.6 3,839,246 + Psest_3674 0.46 -3.1 3,839,247 - Psest_3674 0.46 +1.5 3,839,247 - Psest_3674 0.46 +0.8 3,839,324 + Psest_3674 0.51 -0.2 3,839,324 + Psest_3674 0.51 +1.8 3,839,324 + Psest_3674 0.51 +0.8 3,839,325 - Psest_3674 0.51 +0.8 3,839,325 - Psest_3674 0.51 -1.7 3,839,325 - Psest_3674 0.51 -0.8 3,839,330 + Psest_3674 0.51 +2.0 3,839,385 - Psest_3674 0.55 +0.8 3,839,385 - Psest_3674 0.55 -0.9 3,839,385 - Psest_3674 0.55 -0.8 3,839,385 - Psest_3674 0.55 -2.0 3,839,385 - Psest_3674 0.55 +0.4 3,839,405 + Psest_3674 0.56 +0.6 3,839,406 - Psest_3674 0.56 +2.0 3,839,471 + Psest_3674 0.60 -0.0 3,839,496 - Psest_3674 0.62 -1.3 3,839,498 + Psest_3674 0.62 +0.6 3,839,498 + Psest_3674 0.62 -1.1 3,839,498 + Psest_3674 0.62 -0.5 3,839,498 + Psest_3674 0.62 +0.2 3,839,498 + Psest_3674 0.62 -0.0 3,839,499 - Psest_3674 0.62 -2.4 3,839,499 - Psest_3674 0.62 -3.0 3,839,499 - Psest_3674 0.62 -0.0 3,839,516 + Psest_3674 0.63 +0.9 3,839,517 - Psest_3674 0.63 -1.3 3,839,537 + Psest_3674 0.65 +5.2 3,839,537 + Psest_3674 0.65 -0.4 3,839,537 + Psest_3674 0.65 +0.7 3,839,538 - Psest_3674 0.65 -0.2 3,839,538 - Psest_3674 0.65 -2.2 3,839,538 - Psest_3674 0.65 +2.1 3,839,538 - Psest_3674 0.65 +1.9 3,839,538 - Psest_3674 0.65 +0.6 3,839,538 - Psest_3674 0.65 +0.1 3,839,538 - Psest_3674 0.65 -0.6 3,839,810 + Psest_3674 0.82 +0.8 3,839,810 + Psest_3674 0.82 +0.4 3,839,810 + Psest_3674 0.82 -0.1 3,839,810 + Psest_3674 0.82 -1.9 3,839,810 + Psest_3674 0.82 -3.0 3,839,811 - Psest_3674 0.82 +1.2 3,839,811 - Psest_3674 0.82 +0.9 3,839,811 - Psest_3674 0.82 -0.9 3,839,811 - Psest_3674 0.82 +0.8 3,839,811 - Psest_3674 0.82 -0.0 3,839,811 - Psest_3674 0.82 -1.7 3,839,935 - +3.4 3,839,935 - +0.1 3,839,935 - -0.2 3,840,096 + -0.4 3,840,097 - -1.3 3,840,097 - -2.1 3,840,152 + -0.4 3,840,177 + -1.0 3,840,187 + +0.4 3,840,187 + -1.2 3,840,187 + -1.6 3,840,187 + +1.1 3,840,187 + +1.1 3,840,187 + -0.4 3,841,325 - +0.2 3,841,325 - +2.9 3,841,325 - -1.9 3,841,345 + -0.0 3,841,345 + -0.8 3,841,345 + -2.4 3,841,346 - +0.8 3,841,346 - -0.4 3,841,346 - +0.7 3,841,346 - -1.5 3,841,346 - +0.8 3,841,465 + Psest_3676 0.20 -0.9
Or see this region's nucleotide sequence