Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3381 and Psest_3382 are separated by 221 nucleotides Psest_3382 and Psest_3383 are separated by 81 nucleotides Psest_3383 and Psest_3384 are separated by 7 nucleotides
Psest_3381: Psest_3381 - integral membrane protein MviN, at 3,551,955 to 3,553,502
_3381
Psest_3382: Psest_3382 - ribosomal protein S20, at 3,553,724 to 3,554,002
_3382
Psest_3383: Psest_3383 - Uncharacterized protein conserved in bacteria, at 3,554,084 to 3,554,548
_3383
Psest_3384: Psest_3384 - glutamate 5-kinase, at 3,554,556 to 3,555,674
_3384
Position (kb)
3554
3555 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3553.513 kb on - strand at 3553.513 kb on - strand at 3553.571 kb on + strand at 3553.572 kb on - strand at 3553.572 kb on - strand at 3554.000 kb on + strand at 3554.164 kb on - strand, within Psest_3383 at 3554.164 kb on - strand, within Psest_3383 at 3554.183 kb on - strand, within Psest_3383 at 3554.228 kb on + strand, within Psest_3383 at 3554.229 kb on - strand, within Psest_3383 at 3554.385 kb on + strand, within Psest_3383 at 3554.385 kb on + strand, within Psest_3383 at 3554.386 kb on - strand, within Psest_3383 at 3554.467 kb on + strand, within Psest_3383 at 3554.533 kb on + strand at 3554.585 kb on + strand at 3554.585 kb on + strand at 3554.586 kb on - strand at 3554.586 kb on - strand at 3554.586 kb on - strand at 3554.586 kb on - strand at 3554.586 kb on - strand at 3554.586 kb on - strand at 3554.586 kb on - strand at 3554.586 kb on - strand at 3554.606 kb on - strand at 3554.606 kb on - strand at 3554.606 kb on - strand at 3554.671 kb on + strand, within Psest_3384 at 3554.671 kb on + strand, within Psest_3384 at 3554.671 kb on + strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.672 kb on - strand, within Psest_3384 at 3554.692 kb on - strand, within Psest_3384 at 3554.972 kb on + strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3554.973 kb on - strand, within Psest_3384 at 3555.296 kb on + strand, within Psest_3384 at 3555.297 kb on - strand, within Psest_3384 at 3555.306 kb on - strand, within Psest_3384 at 3555.323 kb on - strand, within Psest_3384
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 3,553,513 - +1.9 3,553,513 - -1.4 3,553,571 + -1.0 3,553,572 - -1.7 3,553,572 - -0.3 3,554,000 + -0.4 3,554,164 - Psest_3383 0.17 -1.0 3,554,164 - Psest_3383 0.17 -2.1 3,554,183 - Psest_3383 0.21 +0.3 3,554,228 + Psest_3383 0.31 -0.7 3,554,229 - Psest_3383 0.31 -1.0 3,554,385 + Psest_3383 0.65 -1.4 3,554,385 + Psest_3383 0.65 -0.6 3,554,386 - Psest_3383 0.65 +0.0 3,554,467 + Psest_3383 0.82 -0.7 3,554,533 + -0.2 3,554,585 + -1.7 3,554,585 + +1.0 3,554,586 - +0.6 3,554,586 - +0.9 3,554,586 - +2.6 3,554,586 - +2.5 3,554,586 - +2.0 3,554,586 - +1.6 3,554,586 - -1.5 3,554,586 - -1.6 3,554,606 - -1.5 3,554,606 - -2.2 3,554,606 - -0.4 3,554,671 + Psest_3384 0.10 -0.9 3,554,671 + Psest_3384 0.10 -1.9 3,554,671 + Psest_3384 0.10 +0.0 3,554,672 - Psest_3384 0.10 -0.4 3,554,672 - Psest_3384 0.10 -1.0 3,554,672 - Psest_3384 0.10 +0.8 3,554,672 - Psest_3384 0.10 -0.4 3,554,672 - Psest_3384 0.10 +1.3 3,554,672 - Psest_3384 0.10 +0.6 3,554,672 - Psest_3384 0.10 -0.8 3,554,672 - Psest_3384 0.10 -1.1 3,554,672 - Psest_3384 0.10 -0.4 3,554,672 - Psest_3384 0.10 -1.3 3,554,672 - Psest_3384 0.10 -0.7 3,554,672 - Psest_3384 0.10 -0.5 3,554,672 - Psest_3384 0.10 +0.8 3,554,672 - Psest_3384 0.10 -1.2 3,554,672 - Psest_3384 0.10 -0.1 3,554,672 - Psest_3384 0.10 -0.6 3,554,672 - Psest_3384 0.10 -0.6 3,554,692 - Psest_3384 0.12 -0.8 3,554,972 + Psest_3384 0.37 -2.2 3,554,973 - Psest_3384 0.37 -1.5 3,554,973 - Psest_3384 0.37 -1.4 3,554,973 - Psest_3384 0.37 -2.2 3,554,973 - Psest_3384 0.37 +0.3 3,554,973 - Psest_3384 0.37 +0.3 3,554,973 - Psest_3384 0.37 +0.0 3,554,973 - Psest_3384 0.37 -1.0 3,554,973 - Psest_3384 0.37 +1.3 3,555,296 + Psest_3384 0.66 -0.9 3,555,297 - Psest_3384 0.66 -2.4 3,555,306 - Psest_3384 0.67 -1.3 3,555,323 - Psest_3384 0.69 +1.1
Or see this region's nucleotide sequence