Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3249 and Psest_3250 are separated by 58 nucleotides Psest_3250 and Psest_3251 are separated by 9 nucleotides Psest_3251 and Psest_3252 are separated by 79 nucleotides Psest_3252 and Psest_3253 are separated by 112 nucleotides
Psest_3249: Psest_3249 - SmpA / OmlA family., at 3,419,142 to 3,419,483
_3249
Psest_3250: Psest_3250 - Rho termination factor, N-terminal domain., at 3,419,542 to 3,419,940
_3250
Psest_3251: Psest_3251 - hypothetical protein, at 3,419,950 to 3,420,081
_3251
Psest_3252: Psest_3252 - Bacterioferritin (cytochrome b1), at 3,420,161 to 3,420,694
_3252
Psest_3253: Psest_3253 - UDP-3-0-acyl N-acetylglucosamine deacetylase, at 3,420,807 to 3,421,718
_3253
Position (kb)
3420
3421 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3419.161 kb on - strand at 3419.161 kb on - strand at 3419.161 kb on - strand at 3419.206 kb on + strand, within Psest_3249 at 3419.206 kb on + strand, within Psest_3249 at 3419.206 kb on + strand, within Psest_3249 at 3419.206 kb on + strand, within Psest_3249 at 3419.207 kb on - strand, within Psest_3249 at 3419.270 kb on + strand, within Psest_3249 at 3419.271 kb on - strand, within Psest_3249 at 3419.271 kb on - strand, within Psest_3249 at 3419.355 kb on + strand, within Psest_3249 at 3419.355 kb on + strand, within Psest_3249 at 3419.356 kb on - strand, within Psest_3249 at 3419.356 kb on - strand, within Psest_3249 at 3419.356 kb on - strand, within Psest_3249 at 3419.356 kb on - strand, within Psest_3249 at 3419.356 kb on - strand, within Psest_3249 at 3419.356 kb on - strand, within Psest_3249 at 3419.356 kb on - strand, within Psest_3249 at 3419.389 kb on - strand, within Psest_3249 at 3419.389 kb on - strand, within Psest_3249 at 3419.391 kb on + strand, within Psest_3249 at 3419.391 kb on + strand, within Psest_3249 at 3419.391 kb on + strand, within Psest_3249 at 3419.391 kb on + strand, within Psest_3249 at 3419.391 kb on + strand, within Psest_3249 at 3419.391 kb on + strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.392 kb on - strand, within Psest_3249 at 3419.566 kb on + strand at 3419.566 kb on + strand at 3419.566 kb on + strand at 3419.567 kb on - strand at 3419.612 kb on - strand, within Psest_3250 at 3419.829 kb on + strand, within Psest_3250 at 3419.830 kb on - strand, within Psest_3250 at 3419.830 kb on - strand, within Psest_3250 at 3419.830 kb on - strand, within Psest_3250 at 3419.839 kb on - strand, within Psest_3250 at 3419.861 kb on + strand, within Psest_3250 at 3419.862 kb on - strand, within Psest_3250 at 3419.862 kb on - strand, within Psest_3250 at 3419.910 kb on + strand at 3419.911 kb on - strand at 3419.921 kb on + strand at 3419.922 kb on - strand at 3419.943 kb on + strand at 3419.944 kb on - strand at 3420.167 kb on + strand at 3420.167 kb on + strand at 3420.167 kb on + strand at 3420.167 kb on + strand at 3420.167 kb on + strand at 3420.167 kb on + strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.168 kb on - strand at 3420.171 kb on + strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.172 kb on - strand at 3420.245 kb on + strand, within Psest_3252 at 3420.246 kb on - strand, within Psest_3252 at 3420.246 kb on - strand, within Psest_3252 at 3420.333 kb on - strand, within Psest_3252 at 3420.333 kb on - strand, within Psest_3252 at 3420.333 kb on - strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.335 kb on + strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.336 kb on - strand, within Psest_3252 at 3420.431 kb on - strand, within Psest_3252 at 3420.497 kb on + strand, within Psest_3252 at 3420.498 kb on - strand, within Psest_3252 at 3420.498 kb on - strand, within Psest_3252 at 3420.565 kb on + strand, within Psest_3252 at 3420.569 kb on + strand, within Psest_3252 at 3420.587 kb on + strand, within Psest_3252 at 3420.587 kb on + strand, within Psest_3252 at 3420.587 kb on + strand, within Psest_3252 at 3420.588 kb on - strand, within Psest_3252 at 3420.588 kb on - strand, within Psest_3252 at 3420.588 kb on - strand, within Psest_3252 at 3420.588 kb on - strand, within Psest_3252 at 3420.588 kb on - strand, within Psest_3252 at 3420.588 kb on - strand, within Psest_3252 at 3420.588 kb on - strand, within Psest_3252 at 3420.736 kb on - strand at 3420.736 kb on - strand at 3420.736 kb on - strand at 3420.757 kb on - strand at 3420.832 kb on + strand at 3420.833 kb on - strand at 3420.833 kb on - strand at 3420.833 kb on - strand at 3420.833 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 3,419,161 - -2.1 3,419,161 - +1.0 3,419,161 - -1.2 3,419,206 + Psest_3249 0.19 +1.5 3,419,206 + Psest_3249 0.19 +1.2 3,419,206 + Psest_3249 0.19 -1.5 3,419,206 + Psest_3249 0.19 -0.4 3,419,207 - Psest_3249 0.19 -0.9 3,419,270 + Psest_3249 0.37 +0.4 3,419,271 - Psest_3249 0.38 -2.0 3,419,271 - Psest_3249 0.38 -0.4 3,419,355 + Psest_3249 0.62 -1.8 3,419,355 + Psest_3249 0.62 -1.7 3,419,356 - Psest_3249 0.63 -1.5 3,419,356 - Psest_3249 0.63 +0.2 3,419,356 - Psest_3249 0.63 -0.7 3,419,356 - Psest_3249 0.63 +1.2 3,419,356 - Psest_3249 0.63 +2.2 3,419,356 - Psest_3249 0.63 -0.4 3,419,356 - Psest_3249 0.63 -1.9 3,419,389 - Psest_3249 0.72 -1.6 3,419,389 - Psest_3249 0.72 -0.4 3,419,391 + Psest_3249 0.73 -1.7 3,419,391 + Psest_3249 0.73 -1.5 3,419,391 + Psest_3249 0.73 -2.3 3,419,391 + Psest_3249 0.73 +2.2 3,419,391 + Psest_3249 0.73 -2.9 3,419,391 + Psest_3249 0.73 -0.1 3,419,392 - Psest_3249 0.73 +0.8 3,419,392 - Psest_3249 0.73 -0.1 3,419,392 - Psest_3249 0.73 -2.1 3,419,392 - Psest_3249 0.73 -1.8 3,419,392 - Psest_3249 0.73 +2.4 3,419,392 - Psest_3249 0.73 -0.3 3,419,392 - Psest_3249 0.73 -1.7 3,419,392 - Psest_3249 0.73 -1.4 3,419,566 + +1.9 3,419,566 + -1.1 3,419,566 + -0.9 3,419,567 - +1.2 3,419,612 - Psest_3250 0.18 -0.0 3,419,829 + Psest_3250 0.72 -0.4 3,419,830 - Psest_3250 0.72 -1.5 3,419,830 - Psest_3250 0.72 -1.8 3,419,830 - Psest_3250 0.72 +0.4 3,419,839 - Psest_3250 0.74 -1.7 3,419,861 + Psest_3250 0.80 +0.2 3,419,862 - Psest_3250 0.80 -1.2 3,419,862 - Psest_3250 0.80 +2.0 3,419,910 + -0.2 3,419,911 - -0.3 3,419,921 + +0.6 3,419,922 - -0.2 3,419,943 + -0.7 3,419,944 - -0.2 3,420,167 + -1.5 3,420,167 + -1.1 3,420,167 + -0.0 3,420,167 + -0.8 3,420,167 + -0.2 3,420,167 + -0.7 3,420,168 - -1.8 3,420,168 - -0.3 3,420,168 - -1.0 3,420,168 - -2.5 3,420,168 - -2.6 3,420,168 - -1.1 3,420,168 - +1.1 3,420,168 - -2.4 3,420,168 - +0.5 3,420,171 + -3.2 3,420,172 - +2.8 3,420,172 - -1.2 3,420,172 - -0.1 3,420,172 - +0.4 3,420,172 - -1.8 3,420,172 - -1.3 3,420,172 - -0.0 3,420,172 - -0.3 3,420,172 - -1.2 3,420,172 - -0.3 3,420,172 - +0.8 3,420,172 - +0.1 3,420,245 + Psest_3252 0.16 -1.2 3,420,246 - Psest_3252 0.16 -1.1 3,420,246 - Psest_3252 0.16 -0.2 3,420,333 - Psest_3252 0.32 -1.7 3,420,333 - Psest_3252 0.32 -0.9 3,420,333 - Psest_3252 0.32 -2.8 3,420,335 + Psest_3252 0.33 -2.2 3,420,335 + Psest_3252 0.33 +0.1 3,420,335 + Psest_3252 0.33 -0.8 3,420,335 + Psest_3252 0.33 +1.2 3,420,335 + Psest_3252 0.33 +1.0 3,420,335 + Psest_3252 0.33 -1.0 3,420,335 + Psest_3252 0.33 +0.2 3,420,335 + Psest_3252 0.33 -0.0 3,420,335 + Psest_3252 0.33 -0.9 3,420,335 + Psest_3252 0.33 -1.9 3,420,335 + Psest_3252 0.33 +1.4 3,420,335 + Psest_3252 0.33 -0.6 3,420,335 + Psest_3252 0.33 -1.2 3,420,336 - Psest_3252 0.33 +0.5 3,420,336 - Psest_3252 0.33 -0.4 3,420,336 - Psest_3252 0.33 +0.2 3,420,336 - Psest_3252 0.33 -1.3 3,420,336 - Psest_3252 0.33 -2.2 3,420,336 - Psest_3252 0.33 -1.8 3,420,336 - Psest_3252 0.33 -1.0 3,420,336 - Psest_3252 0.33 +0.5 3,420,336 - Psest_3252 0.33 -1.7 3,420,336 - Psest_3252 0.33 +0.2 3,420,336 - Psest_3252 0.33 -1.8 3,420,336 - Psest_3252 0.33 -0.9 3,420,336 - Psest_3252 0.33 -3.0 3,420,336 - Psest_3252 0.33 -0.8 3,420,336 - Psest_3252 0.33 -1.1 3,420,336 - Psest_3252 0.33 -1.7 3,420,336 - Psest_3252 0.33 +0.8 3,420,431 - Psest_3252 0.51 +0.4 3,420,497 + Psest_3252 0.63 -1.3 3,420,498 - Psest_3252 0.63 -1.3 3,420,498 - Psest_3252 0.63 -0.4 3,420,565 + Psest_3252 0.76 +0.5 3,420,569 + Psest_3252 0.76 -1.8 3,420,587 + Psest_3252 0.80 -1.5 3,420,587 + Psest_3252 0.80 +1.2 3,420,587 + Psest_3252 0.80 -0.7 3,420,588 - Psest_3252 0.80 -0.2 3,420,588 - Psest_3252 0.80 +0.7 3,420,588 - Psest_3252 0.80 -0.4 3,420,588 - Psest_3252 0.80 -2.0 3,420,588 - Psest_3252 0.80 +0.8 3,420,588 - Psest_3252 0.80 +1.8 3,420,588 - Psest_3252 0.80 -1.3 3,420,736 - -1.7 3,420,736 - +2.5 3,420,736 - +0.0 3,420,757 - +0.8 3,420,832 + +0.5 3,420,833 - -2.5 3,420,833 - -2.1 3,420,833 - -2.1 3,420,833 - -3.4
Or see this region's nucleotide sequence