Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3137 and Psest_3138 are separated by 44 nucleotides Psest_3138 and Psest_3139 overlap by 4 nucleotides Psest_3139 and Psest_3140 are separated by 48 nucleotides Psest_3140 and Psest_3141 are separated by 108 nucleotides Psest_3141 and Psest_3142 are separated by 58 nucleotides
Psest_3137: Psest_3137 - phosphoribosylglycinamide formyltransferase 2, at 3,312,782 to 3,313,963
_3137
Psest_3138: Psest_3138 - Predicted Fe-S protein, at 3,314,008 to 3,314,199
_3138
Psest_3139: Psest_3139 - Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily, at 3,314,196 to 3,314,717
_3139
Psest_3140: Psest_3140 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 3,314,766 to 3,315,491
_3140
Psest_3141: Psest_3141 - ADP-ribose pyrophosphatase, at 3,315,600 to 3,316,163
_3141
Psest_3142: Psest_3142 - Uncharacterized protein conserved in bacteria, at 3,316,222 to 3,316,725
_3142
Position (kb)
3314
3315
3316 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3313.790 kb on + strand, within Psest_3137 at 3313.790 kb on + strand, within Psest_3137 at 3313.790 kb on + strand, within Psest_3137 at 3313.791 kb on - strand, within Psest_3137 at 3313.791 kb on - strand, within Psest_3137 at 3313.791 kb on - strand, within Psest_3137 at 3313.841 kb on + strand, within Psest_3137 at 3313.842 kb on - strand, within Psest_3137 at 3314.009 kb on + strand at 3314.009 kb on + strand at 3314.009 kb on + strand at 3314.010 kb on - strand at 3314.010 kb on - strand at 3314.238 kb on - strand at 3314.245 kb on + strand at 3314.245 kb on + strand at 3314.245 kb on + strand at 3314.246 kb on - strand at 3314.246 kb on - strand at 3314.246 kb on - strand at 3314.440 kb on + strand, within Psest_3139 at 3314.440 kb on + strand, within Psest_3139 at 3314.453 kb on + strand, within Psest_3139 at 3314.453 kb on + strand, within Psest_3139 at 3314.453 kb on + strand, within Psest_3139 at 3314.454 kb on - strand, within Psest_3139 at 3314.454 kb on - strand, within Psest_3139 at 3314.526 kb on - strand, within Psest_3139 at 3314.553 kb on - strand, within Psest_3139 at 3314.755 kb on - strand at 3314.836 kb on + strand at 3314.836 kb on + strand at 3314.836 kb on + strand at 3314.836 kb on + strand at 3314.837 kb on - strand at 3314.837 kb on - strand at 3314.837 kb on - strand at 3314.839 kb on - strand, within Psest_3140 at 3314.839 kb on - strand, within Psest_3140 at 3314.883 kb on + strand, within Psest_3140 at 3314.917 kb on + strand, within Psest_3140 at 3314.917 kb on + strand, within Psest_3140 at 3314.917 kb on + strand, within Psest_3140 at 3314.917 kb on + strand, within Psest_3140 at 3314.917 kb on + strand, within Psest_3140 at 3314.918 kb on - strand, within Psest_3140 at 3314.918 kb on - strand, within Psest_3140 at 3314.918 kb on - strand, within Psest_3140 at 3314.918 kb on - strand, within Psest_3140 at 3314.918 kb on - strand, within Psest_3140 at 3314.918 kb on - strand, within Psest_3140 at 3314.935 kb on + strand, within Psest_3140 at 3315.037 kb on + strand, within Psest_3140 at 3315.037 kb on + strand, within Psest_3140 at 3315.038 kb on - strand, within Psest_3140 at 3315.058 kb on + strand, within Psest_3140 at 3315.059 kb on - strand, within Psest_3140 at 3315.059 kb on - strand, within Psest_3140 at 3315.059 kb on - strand, within Psest_3140 at 3315.059 kb on - strand, within Psest_3140 at 3315.059 kb on - strand, within Psest_3140 at 3315.216 kb on + strand, within Psest_3140 at 3315.217 kb on - strand, within Psest_3140 at 3315.350 kb on - strand, within Psest_3140 at 3315.369 kb on + strand, within Psest_3140 at 3315.369 kb on + strand, within Psest_3140 at 3315.370 kb on - strand, within Psest_3140 at 3315.370 kb on - strand, within Psest_3140 at 3315.452 kb on - strand at 3315.538 kb on - strand at 3315.607 kb on - strand at 3315.897 kb on + strand, within Psest_3141 at 3315.897 kb on + strand, within Psest_3141 at 3315.897 kb on + strand, within Psest_3141 at 3315.897 kb on + strand, within Psest_3141 at 3315.898 kb on - strand, within Psest_3141 at 3315.898 kb on - strand, within Psest_3141 at 3315.898 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.257 kb on + strand at 3316.257 kb on + strand at 3316.258 kb on - strand at 3316.287 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.482 kb on + strand, within Psest_3142 at 3316.482 kb on + strand, within Psest_3142 at 3316.483 kb on - strand, within Psest_3142 at 3316.483 kb on - strand, within Psest_3142 at 3316.483 kb on - strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 3,313,790 + Psest_3137 0.85 +0.7 3,313,790 + Psest_3137 0.85 -1.0 3,313,790 + Psest_3137 0.85 -0.2 3,313,791 - Psest_3137 0.85 -1.2 3,313,791 - Psest_3137 0.85 -1.6 3,313,791 - Psest_3137 0.85 -3.6 3,313,841 + Psest_3137 0.90 +2.0 3,313,842 - Psest_3137 0.90 -3.0 3,314,009 + -1.2 3,314,009 + -0.6 3,314,009 + -0.9 3,314,010 - +0.7 3,314,010 - -1.1 3,314,238 - -0.6 3,314,245 + -2.0 3,314,245 + -0.1 3,314,245 + +1.0 3,314,246 - -0.9 3,314,246 - -1.4 3,314,246 - -0.1 3,314,440 + Psest_3139 0.47 +1.1 3,314,440 + Psest_3139 0.47 -1.3 3,314,453 + Psest_3139 0.49 +0.4 3,314,453 + Psest_3139 0.49 -1.2 3,314,453 + Psest_3139 0.49 -0.6 3,314,454 - Psest_3139 0.49 +0.6 3,314,454 - Psest_3139 0.49 -2.6 3,314,526 - Psest_3139 0.63 -0.7 3,314,553 - Psest_3139 0.68 -3.4 3,314,755 - -1.2 3,314,836 + +1.8 3,314,836 + +0.4 3,314,836 + +0.1 3,314,836 + -0.9 3,314,837 - -1.7 3,314,837 - +1.7 3,314,837 - +1.9 3,314,839 - Psest_3140 0.10 -0.8 3,314,839 - Psest_3140 0.10 -2.8 3,314,883 + Psest_3140 0.16 +1.1 3,314,917 + Psest_3140 0.21 -2.7 3,314,917 + Psest_3140 0.21 -2.4 3,314,917 + Psest_3140 0.21 -1.3 3,314,917 + Psest_3140 0.21 -3.2 3,314,917 + Psest_3140 0.21 -2.7 3,314,918 - Psest_3140 0.21 -1.4 3,314,918 - Psest_3140 0.21 -2.1 3,314,918 - Psest_3140 0.21 -3.1 3,314,918 - Psest_3140 0.21 -1.7 3,314,918 - Psest_3140 0.21 -1.6 3,314,918 - Psest_3140 0.21 -0.6 3,314,935 + Psest_3140 0.23 -2.1 3,315,037 + Psest_3140 0.37 -2.2 3,315,037 + Psest_3140 0.37 -0.7 3,315,038 - Psest_3140 0.37 +0.7 3,315,058 + Psest_3140 0.40 +0.0 3,315,059 - Psest_3140 0.40 -1.1 3,315,059 - Psest_3140 0.40 -1.5 3,315,059 - Psest_3140 0.40 -0.6 3,315,059 - Psest_3140 0.40 -1.3 3,315,059 - Psest_3140 0.40 +1.3 3,315,216 + Psest_3140 0.62 -1.3 3,315,217 - Psest_3140 0.62 -0.3 3,315,350 - Psest_3140 0.80 -2.2 3,315,369 + Psest_3140 0.83 -1.5 3,315,369 + Psest_3140 0.83 -0.7 3,315,370 - Psest_3140 0.83 -3.4 3,315,370 - Psest_3140 0.83 +0.5 3,315,452 - +0.7 3,315,538 - -3.9 3,315,607 - +0.0 3,315,897 + Psest_3141 0.53 -1.7 3,315,897 + Psest_3141 0.53 -1.7 3,315,897 + Psest_3141 0.53 +1.7 3,315,897 + Psest_3141 0.53 -1.4 3,315,898 - Psest_3141 0.53 -3.3 3,315,898 - Psest_3141 0.53 +1.9 3,315,898 - Psest_3141 0.53 +0.7 3,315,900 - Psest_3141 0.53 -1.4 3,315,900 - Psest_3141 0.53 +0.6 3,315,900 - Psest_3141 0.53 +0.9 3,315,900 - Psest_3141 0.53 -1.1 3,315,933 + Psest_3141 0.59 +2.0 3,315,933 + Psest_3141 0.59 -1.8 3,315,933 + Psest_3141 0.59 -2.3 3,315,933 + Psest_3141 0.59 -0.7 3,315,933 + Psest_3141 0.59 -3.6 3,315,933 + Psest_3141 0.59 -0.2 3,315,933 + Psest_3141 0.59 -1.6 3,315,933 + Psest_3141 0.59 -0.8 3,315,933 + Psest_3141 0.59 -0.1 3,315,933 + Psest_3141 0.59 -0.4 3,315,933 + Psest_3141 0.59 -0.4 3,315,933 + Psest_3141 0.59 -0.3 3,315,933 + Psest_3141 0.59 -1.4 3,315,933 + Psest_3141 0.59 -2.7 3,315,933 + Psest_3141 0.59 -0.1 3,315,933 + Psest_3141 0.59 +1.1 3,315,933 + Psest_3141 0.59 +0.6 3,315,933 + Psest_3141 0.59 -0.4 3,315,933 + Psest_3141 0.59 -1.3 3,315,934 - Psest_3141 0.59 +0.4 3,315,934 - Psest_3141 0.59 +0.0 3,315,934 - Psest_3141 0.59 -2.1 3,315,934 - Psest_3141 0.59 -0.1 3,315,934 - Psest_3141 0.59 -0.9 3,315,934 - Psest_3141 0.59 -0.1 3,315,934 - Psest_3141 0.59 -0.1 3,315,934 - Psest_3141 0.59 -2.6 3,315,934 - Psest_3141 0.59 -1.8 3,315,934 - Psest_3141 0.59 -3.1 3,315,934 - Psest_3141 0.59 +3.0 3,315,934 - Psest_3141 0.59 -1.0 3,315,934 - Psest_3141 0.59 -1.0 3,315,934 - Psest_3141 0.59 +0.3 3,315,934 - Psest_3141 0.59 -1.2 3,315,934 - Psest_3141 0.59 -1.5 3,315,934 - Psest_3141 0.59 -1.0 3,315,934 - Psest_3141 0.59 +0.3 3,316,064 - Psest_3141 0.82 -0.3 3,316,064 - Psest_3141 0.82 +1.5 3,316,064 - Psest_3141 0.82 +0.7 3,316,064 - Psest_3141 0.82 -1.0 3,316,064 - Psest_3141 0.82 +0.8 3,316,064 - Psest_3141 0.82 -2.4 3,316,064 - Psest_3141 0.82 -0.7 3,316,257 + -0.8 3,316,257 + +1.0 3,316,258 - -0.1 3,316,287 + Psest_3142 0.13 -0.4 3,316,453 + Psest_3142 0.46 +0.1 3,316,453 + Psest_3142 0.46 -1.1 3,316,453 + Psest_3142 0.46 -0.3 3,316,453 + Psest_3142 0.46 -1.8 3,316,453 + Psest_3142 0.46 +0.0 3,316,453 + Psest_3142 0.46 +2.2 3,316,453 + Psest_3142 0.46 -0.6 3,316,454 - Psest_3142 0.46 +0.3 3,316,454 - Psest_3142 0.46 +0.8 3,316,454 - Psest_3142 0.46 +0.6 3,316,454 - Psest_3142 0.46 -2.3 3,316,482 + Psest_3142 0.52 +1.0 3,316,482 + Psest_3142 0.52 +0.6 3,316,483 - Psest_3142 0.52 +1.6 3,316,483 - Psest_3142 0.52 -2.9 3,316,483 - Psest_3142 0.52 -0.6 3,316,486 + Psest_3142 0.52 -2.8 3,316,486 + Psest_3142 0.52 +1.0 3,316,486 + Psest_3142 0.52 +1.3 3,316,486 + Psest_3142 0.52 +1.1 3,316,486 + Psest_3142 0.52 -1.7 3,316,486 + Psest_3142 0.52 -1.3 3,316,486 + Psest_3142 0.52 +2.2 3,316,486 + Psest_3142 0.52 +0.0 3,316,486 + Psest_3142 0.52 +1.3 3,316,486 + Psest_3142 0.52 +1.0 3,316,486 + Psest_3142 0.52 -1.1 3,316,486 + Psest_3142 0.52 -2.6 3,316,486 + Psest_3142 0.52 -1.3 3,316,487 - Psest_3142 0.53 -1.2 3,316,487 - Psest_3142 0.53 -1.1 3,316,487 - Psest_3142 0.53 -1.1 3,316,487 - Psest_3142 0.53 +1.2 3,316,487 - Psest_3142 0.53 +2.4 3,316,487 - Psest_3142 0.53 -2.3 3,316,487 - Psest_3142 0.53 +0.8 3,316,487 - Psest_3142 0.53 -0.7
Or see this region's nucleotide sequence