Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26090

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
2,713,308	+		PGA1_c26080	0.28	-0.6
2,713,355	+		PGA1_c26080	0.34	-0.7
2,713,411	-		PGA1_c26080	0.40	-0.5
2,713,525	+		PGA1_c26080	0.52	+2.4
2,713,533	-		PGA1_c26080	0.53	+1.2
2,713,533	-		PGA1_c26080	0.53	+0.1
2,713,628	+		PGA1_c26080	0.63	+0.3
2,713,633	+		PGA1_c26080	0.63	-2.6
2,713,641	-		PGA1_c26080	0.64	-0.9
2,713,658	+		PGA1_c26080	0.66	-0.6
2,713,665	+		PGA1_c26080	0.67	-2.2
2,713,675	+		PGA1_c26080	0.68	-0.9
2,713,688	-		PGA1_c26080	0.69	-1.2
2,713,710	+		PGA1_c26080	0.72	+0.5
2,713,720	+		PGA1_c26080	0.73	+0.3
2,713,720	+		PGA1_c26080	0.73	+1.8
2,713,720	+		PGA1_c26080	0.73	-0.8
2,713,720	+		PGA1_c26080	0.73	-1.9
2,713,728	-		PGA1_c26080	0.74	+0.4
2,713,728	-		PGA1_c26080	0.74	-1.2
2,713,728	-		PGA1_c26080	0.74	+1.2
2,713,738	-		PGA1_c26080	0.75	-1.8
2,713,739	-		PGA1_c26080	0.75	-2.9
2,713,758	+		PGA1_c26080	0.77	-1.4
2,713,764	-		PGA1_c26080	0.78	+0.1
2,713,764	-		PGA1_c26080	0.78	-0.9
2,713,800	+		PGA1_c26080	0.81	+2.2
2,713,800	+		PGA1_c26080	0.81	+0.2
2,713,800	+		PGA1_c26080	0.81	-0.9
2,713,808	-		PGA1_c26080	0.82	-0.8
2,713,808	-		PGA1_c26080	0.82	-0.5
2,713,850	-		PGA1_c26080	0.87	+0.4
2,713,911	-				-1.0
2,713,949	+				-0.7
2,713,960	+				+0.4
2,713,968	-				-1.1
2,713,969	-				-0.1
2,713,996	+				+0.7
2,714,004	-				+0.4
2,714,042	+				+0.2
2,714,065	-				-0.8
2,714,073	-				+1.0
2,714,078	-				+2.0
2,714,084	-				+0.8
2,714,101	-				-0.8
2,714,101	-				-0.6
2,714,191	+				+0.2
2,714,271	+				+0.4
2,714,307	+		PGA1_c26090	0.13	-0.6
2,714,315	-		PGA1_c26090	0.14	+2.5
2,714,317	+		PGA1_c26090	0.14	+0.5
2,714,318	+		PGA1_c26090	0.15	-0.2
2,714,321	-		PGA1_c26090	0.15	+0.4
2,714,323	+		PGA1_c26090	0.15	-0.2
2,714,323	+		PGA1_c26090	0.15	+0.3
2,714,323	+		PGA1_c26090	0.15	-0.8
2,714,331	-		PGA1_c26090	0.16	-0.0
2,714,371	+		PGA1_c26090	0.22	-0.2
2,714,386	-		PGA1_c26090	0.24	-1.0
2,714,406	-		PGA1_c26090	0.26	-1.3
2,714,432	-		PGA1_c26090	0.30	-1.7
2,714,442	-		PGA1_c26090	0.31	-1.0
2,714,460	+		PGA1_c26090	0.33	-1.1
2,714,471	-		PGA1_c26090	0.35	-0.8
2,714,475	+		PGA1_c26090	0.35	-1.4
2,714,496	+		PGA1_c26090	0.38	-1.8
2,714,501	+		PGA1_c26090	0.39	-0.8
2,714,534	+		PGA1_c26090	0.43	-2.7
2,714,542	-		PGA1_c26090	0.44	+1.4
2,714,542	-		PGA1_c26090	0.44	-2.1
2,714,636	-		PGA1_c26090	0.57	-0.2
2,714,650	+		PGA1_c26090	0.58	+0.6
2,714,651	+		PGA1_c26090	0.58	-0.3
2,714,655	+		PGA1_c26090	0.59	+1.5
2,714,655	+		PGA1_c26090	0.59	-1.6
2,714,663	-		PGA1_c26090	0.60	+1.2
2,714,663	-		PGA1_c26090	0.60	+1.2
2,714,771	-		PGA1_c26090	0.74	+0.5
2,714,788	+		PGA1_c26090	0.77	-2.2
2,714,799	+		PGA1_c26090	0.78	+0.9
2,714,799	+		PGA1_c26090	0.78	+0.3
2,714,859	-		PGA1_c26090	0.86	-0.4
2,714,861	+		PGA1_c26090	0.86	-0.8
2,714,905	+				+0.5
2,714,905	+				-1.0
2,714,905	+				+0.8
2,714,913	-				-0.4
2,714,922	+				-0.6
2,714,934	+				-0.0
2,714,986	+				+0.7
2,714,986	+				-0.2
2,714,991	+				+1.2
2,714,991	+				+0.7
2,714,991	+				-1.3
2,714,991	+				+1.2
2,714,994	-				-1.2
2,714,999	-				-0.7
2,714,999	-				+1.2
2,714,999	-				-1.2
2,714,999	-				+0.0
2,715,092	+				-0.8
2,715,114	+				+0.6
2,715,122	+				-1.5
2,715,125	+				-0.4
2,715,130	-				-1.6
2,715,137	+				+0.8
2,715,137	+				-1.3
2,715,137	+				-0.7
2,715,247	+		PGA1_c26100	0.15	+0.3
2,715,254	+		PGA1_c26100	0.16	-0.6
2,715,264	+		PGA1_c26100	0.17	-0.1
2,715,362	+		PGA1_c26100	0.27	+0.9
2,715,370	+		PGA1_c26100	0.28	-2.2
2,715,370	+		PGA1_c26100	0.28	-0.6
2,715,378	+		PGA1_c26100	0.29	-2.5
2,715,378	+		PGA1_c26100	0.29	+0.2
2,715,378	+		PGA1_c26100	0.29	-0.6
2,715,386	-		PGA1_c26100	0.30	-2.5
2,715,428	+		PGA1_c26100	0.34	-0.4
2,715,428	+		PGA1_c26100	0.34	+0.1
2,715,428	+		PGA1_c26100	0.34	+0.6
2,715,428	+		PGA1_c26100	0.34	-0.2
2,715,428	+		PGA1_c26100	0.34	-1.0
2,715,428	+		PGA1_c26100	0.34	-0.1
2,715,428	+		PGA1_c26100	0.34	-0.4
2,715,428	+		PGA1_c26100	0.34	-0.4
2,715,428	+		PGA1_c26100	0.34	+0.0
2,715,428	+		PGA1_c26100	0.34	+0.9
2,715,428	+		PGA1_c26100	0.34	+0.3
2,715,428	+		PGA1_c26100	0.34	-0.1
2,715,428	+		PGA1_c26100	0.34	-0.1
2,715,436	-		PGA1_c26100	0.35	-1.1
2,715,436	-		PGA1_c26100	0.35	-0.5
2,715,436	-		PGA1_c26100	0.35	+0.5
2,715,436	-		PGA1_c26100	0.35	+0.2
2,715,436	-		PGA1_c26100	0.35	-1.2
2,715,436	-		PGA1_c26100	0.35	+0.1
2,715,436	-		PGA1_c26100	0.35	+0.9
2,715,436	-		PGA1_c26100	0.35	+0.2
2,715,436	-		PGA1_c26100	0.35	+0.5
2,715,436	-		PGA1_c26100	0.35	-0.5
2,715,436	-		PGA1_c26100	0.35	-2.5
2,715,436	-		PGA1_c26100	0.35	-0.2
2,715,436	-		PGA1_c26100	0.35	+0.7
2,715,436	-		PGA1_c26100	0.35	-0.1
2,715,476	+		PGA1_c26100	0.39	-0.6
2,715,478	+		PGA1_c26100	0.39	+1.2
2,715,486	-		PGA1_c26100	0.40	+0.4
2,715,493	+		PGA1_c26100	0.40	-0.8
2,715,550	+		PGA1_c26100	0.46	-0.0
2,715,558	-		PGA1_c26100	0.47	-0.8
2,715,573	+		PGA1_c26100	0.49	+0.0
2,715,618	-		PGA1_c26100	0.53	-1.2
2,715,649	+		PGA1_c26100	0.56	+0.3
2,715,656	+		PGA1_c26100	0.57	-0.5
2,715,656	+		PGA1_c26100	0.57	+0.1
2,715,676	+		PGA1_c26100	0.59	-1.8
2,715,684	-		PGA1_c26100	0.60	+0.1
2,715,690	+		PGA1_c26100	0.61	-0.5
2,715,727	+		PGA1_c26100	0.64	+2.0
2,715,731	+		PGA1_c26100	0.65	+1.1
2,715,735	-		PGA1_c26100	0.65	-0.8
2,715,754	-		PGA1_c26100	0.67	+0.2
2,715,770	+		PGA1_c26100	0.69	+1.4
2,715,800	+		PGA1_c26100	0.72	-0.2
2,715,822	-		PGA1_c26100	0.74	+1.2
2,715,824	+		PGA1_c26100	0.74	-0.6
2,715,824	+		PGA1_c26100	0.74	+1.4
2,715,824	+		PGA1_c26100	0.74	+0.9
2,715,824	+		PGA1_c26100	0.74	-0.3
2,715,832	-		PGA1_c26100	0.75	+0.4
2,715,832	-		PGA1_c26100	0.75	+0.6
2,715,832	-		PGA1_c26100	0.75	+0.5
2,715,832	-		PGA1_c26100	0.75	-0.7
2,715,851	-		PGA1_c26100	0.77	-0.4
2,715,876	+		PGA1_c26100	0.80	-0.9
2,715,879	-		PGA1_c26100	0.80	-0.5
2,715,881	+		PGA1_c26100	0.80	+0.1
2,715,893	+		PGA1_c26100	0.81	+1.2
2,715,893	+		PGA1_c26100	0.81	-2.6
2,715,901	-		PGA1_c26100	0.82	+0.2
2,715,901	-		PGA1_c26100	0.82	+1.8
2,715,923	-		PGA1_c26100	0.84	+0.8
2,715,928	+		PGA1_c26100	0.85	-0.8