Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2562 and Psest_2563 are separated by 49 nucleotides Psest_2563 and Psest_2564 overlap by 4 nucleotides Psest_2564 and Psest_2565 are separated by 101 nucleotides
Psest_2562: Psest_2562 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 2,743,205 to 2,745,541
_2562
Psest_2563: Psest_2563 - Arabinose efflux permease, at 2,745,591 to 2,746,826
_2563
Psest_2564: Psest_2564 - NAD(P)H:quinone oxidoreductase, type IV, at 2,746,823 to 2,747,449
_2564
Psest_2565: Psest_2565 - Transcriptional regulator, at 2,747,551 to 2,748,459
_2565
Position (kb)
2745
2746
2747 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2744.617 kb on + strand, within Psest_2562 at 2744.638 kb on - strand, within Psest_2562 at 2744.718 kb on + strand, within Psest_2562 at 2744.718 kb on + strand, within Psest_2562 at 2744.718 kb on + strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2745.121 kb on + strand, within Psest_2562 at 2745.121 kb on + strand, within Psest_2562 at 2745.122 kb on - strand, within Psest_2562 at 2745.122 kb on - strand, within Psest_2562 at 2745.847 kb on - strand, within Psest_2563 at 2746.103 kb on - strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.172 kb on - strand, within Psest_2563 at 2746.182 kb on + strand, within Psest_2563 at 2746.183 kb on - strand, within Psest_2563 at 2746.275 kb on + strand, within Psest_2563 at 2746.276 kb on - strand, within Psest_2563 at 2746.276 kb on - strand, within Psest_2563 at 2746.276 kb on - strand, within Psest_2563 at 2746.282 kb on + strand, within Psest_2563 at 2746.282 kb on + strand, within Psest_2563 at 2746.283 kb on - strand, within Psest_2563 at 2746.283 kb on - strand, within Psest_2563 at 2746.570 kb on - strand, within Psest_2563 at 2747.017 kb on + strand, within Psest_2564 at 2747.018 kb on - strand, within Psest_2564 at 2747.018 kb on - strand, within Psest_2564 at 2747.057 kb on + strand, within Psest_2564 at 2747.062 kb on + strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.063 kb on - strand, within Psest_2564 at 2747.159 kb on + strand, within Psest_2564 at 2747.160 kb on - strand, within Psest_2564 at 2747.160 kb on - strand, within Psest_2564 at 2747.244 kb on + strand, within Psest_2564 at 2747.425 kb on - strand at 2747.427 kb on + strand at 2747.428 kb on - strand at 2747.428 kb on - strand at 2747.428 kb on - strand at 2747.428 kb on - strand at 2747.428 kb on - strand at 2747.439 kb on - strand at 2747.495 kb on - strand at 2747.539 kb on - strand at 2747.539 kb on - strand at 2747.579 kb on + strand at 2747.579 kb on + strand at 2747.579 kb on + strand at 2747.580 kb on - strand at 2747.580 kb on - strand at 2747.583 kb on + strand at 2747.583 kb on + strand at 2747.583 kb on + strand at 2747.583 kb on + strand at 2747.583 kb on + strand at 2747.583 kb on + strand at 2747.583 kb on + strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.584 kb on - strand at 2747.637 kb on + strand at 2747.637 kb on + strand at 2747.637 kb on + strand at 2747.637 kb on + strand at 2747.637 kb on + strand at 2747.637 kb on + strand at 2747.638 kb on - strand at 2747.638 kb on - strand at 2747.638 kb on - strand at 2747.638 kb on - strand at 2747.638 kb on - strand at 2747.638 kb on - strand at 2747.638 kb on - strand at 2747.638 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,744,617 + Psest_2562 0.60 -0.2 2,744,638 - Psest_2562 0.61 +1.3 2,744,718 + Psest_2562 0.65 +0.8 2,744,718 + Psest_2562 0.65 -1.2 2,744,718 + Psest_2562 0.65 +0.7 2,744,719 - Psest_2562 0.65 +0.8 2,744,719 - Psest_2562 0.65 +2.8 2,744,719 - Psest_2562 0.65 +0.4 2,744,719 - Psest_2562 0.65 -0.8 2,744,779 - Psest_2562 0.67 -0.2 2,744,779 - Psest_2562 0.67 +0.2 2,744,779 - Psest_2562 0.67 -2.0 2,744,779 - Psest_2562 0.67 -1.5 2,744,779 - Psest_2562 0.67 +3.0 2,745,121 + Psest_2562 0.82 -0.7 2,745,121 + Psest_2562 0.82 -0.9 2,745,122 - Psest_2562 0.82 -0.7 2,745,122 - Psest_2562 0.82 +1.0 2,745,847 - Psest_2563 0.21 +0.5 2,746,103 - Psest_2563 0.41 -0.2 2,746,115 + Psest_2563 0.42 -0.0 2,746,115 + Psest_2563 0.42 -0.3 2,746,115 + Psest_2563 0.42 +0.3 2,746,115 + Psest_2563 0.42 -0.1 2,746,115 + Psest_2563 0.42 +0.3 2,746,115 + Psest_2563 0.42 -1.0 2,746,115 + Psest_2563 0.42 +1.3 2,746,116 - Psest_2563 0.42 +0.7 2,746,116 - Psest_2563 0.42 -2.5 2,746,116 - Psest_2563 0.42 -0.5 2,746,116 - Psest_2563 0.42 -1.0 2,746,171 + Psest_2563 0.47 -0.1 2,746,171 + Psest_2563 0.47 +0.4 2,746,171 + Psest_2563 0.47 -1.0 2,746,171 + Psest_2563 0.47 +1.3 2,746,171 + Psest_2563 0.47 +1.2 2,746,172 - Psest_2563 0.47 -0.8 2,746,182 + Psest_2563 0.48 +1.7 2,746,183 - Psest_2563 0.48 -1.3 2,746,275 + Psest_2563 0.55 -0.4 2,746,276 - Psest_2563 0.55 +0.2 2,746,276 - Psest_2563 0.55 +1.1 2,746,276 - Psest_2563 0.55 -1.3 2,746,282 + Psest_2563 0.56 -0.7 2,746,282 + Psest_2563 0.56 +0.1 2,746,283 - Psest_2563 0.56 +0.3 2,746,283 - Psest_2563 0.56 +2.1 2,746,570 - Psest_2563 0.79 -1.4 2,747,017 + Psest_2564 0.31 +0.7 2,747,018 - Psest_2564 0.31 -0.8 2,747,018 - Psest_2564 0.31 +0.4 2,747,057 + Psest_2564 0.37 +0.1 2,747,062 + Psest_2564 0.38 +0.5 2,747,063 - Psest_2564 0.38 +0.1 2,747,063 - Psest_2564 0.38 +1.7 2,747,063 - Psest_2564 0.38 -1.2 2,747,063 - Psest_2564 0.38 +0.8 2,747,063 - Psest_2564 0.38 -0.6 2,747,063 - Psest_2564 0.38 -2.5 2,747,063 - Psest_2564 0.38 -0.5 2,747,063 - Psest_2564 0.38 -0.1 2,747,063 - Psest_2564 0.38 +0.1 2,747,063 - Psest_2564 0.38 -0.8 2,747,159 + Psest_2564 0.54 +0.4 2,747,160 - Psest_2564 0.54 -0.6 2,747,160 - Psest_2564 0.54 -1.3 2,747,244 + Psest_2564 0.67 +0.2 2,747,425 - -0.6 2,747,427 + +0.1 2,747,428 - -0.4 2,747,428 - +2.8 2,747,428 - +3.8 2,747,428 - -1.0 2,747,428 - -1.8 2,747,439 - +0.5 2,747,495 - +1.6 2,747,539 - +1.4 2,747,539 - +0.7 2,747,579 + -0.8 2,747,579 + +1.7 2,747,579 + +0.9 2,747,580 - -2.9 2,747,580 - -0.8 2,747,583 + -0.7 2,747,583 + -1.3 2,747,583 + +0.8 2,747,583 + +4.3 2,747,583 + +0.2 2,747,583 + -0.1 2,747,583 + +1.0 2,747,584 - -0.3 2,747,584 - +0.7 2,747,584 - -2.8 2,747,584 - +0.1 2,747,584 - -0.3 2,747,584 - +0.5 2,747,584 - -1.3 2,747,584 - +1.9 2,747,584 - -0.9 2,747,584 - -0.5 2,747,584 - -1.9 2,747,637 + -1.4 2,747,637 + +2.7 2,747,637 + +0.1 2,747,637 + -1.9 2,747,637 + -0.8 2,747,637 + -1.0 2,747,638 - -1.9 2,747,638 - +0.1 2,747,638 - +1.1 2,747,638 - -2.5 2,747,638 - +0.7 2,747,638 - -0.5 2,747,638 - -0.1 2,747,638 - -1.2
Or see this region's nucleotide sequence