Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2524 and Psest_2525 are separated by 13 nucleotides Psest_2525 and Psest_2526 are separated by 92 nucleotides Psest_2526 and Psest_2527 are separated by 351 nucleotides
Psest_2524: Psest_2524 - cytochrome c oxidase, cbb3-type, subunit I, at 2,704,456 to 2,705,880
_2524
Psest_2525: Psest_2525 - cytochrome c oxidase, cbb3-type, subunit II, at 2,705,894 to 2,706,505
_2525
Psest_2526: Psest_2526 - cytochrome c oxidase, cbb3-type, subunit III, at 2,706,598 to 2,707,533
_2526
Psest_2527: Psest_2527 - cytochrome c oxidase, cbb3-type, subunit I, at 2,707,885 to 2,709,312
_2527
Position (kb)
2706
2707
2708 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2705.638 kb on + strand, within Psest_2524 at 2705.638 kb on + strand, within Psest_2524 at 2705.639 kb on - strand, within Psest_2524 at 2705.812 kb on + strand at 2705.813 kb on - strand at 2705.887 kb on + strand at 2705.887 kb on + strand at 2705.888 kb on - strand at 2705.891 kb on + strand at 2706.071 kb on + strand, within Psest_2525 at 2706.071 kb on + strand, within Psest_2525 at 2706.071 kb on + strand, within Psest_2525 at 2706.149 kb on + strand, within Psest_2525 at 2706.149 kb on + strand, within Psest_2525 at 2706.149 kb on + strand, within Psest_2525 at 2706.149 kb on + strand, within Psest_2525 at 2706.149 kb on + strand, within Psest_2525 at 2706.206 kb on - strand, within Psest_2525 at 2706.465 kb on - strand at 2706.592 kb on + strand at 2706.592 kb on + strand at 2706.593 kb on - strand at 2706.619 kb on + strand at 2706.620 kb on - strand at 2706.620 kb on - strand at 2706.745 kb on + strand, within Psest_2526 at 2706.745 kb on + strand, within Psest_2526 at 2706.925 kb on + strand, within Psest_2526 at 2706.946 kb on + strand, within Psest_2526 at 2706.946 kb on + strand, within Psest_2526 at 2707.021 kb on + strand, within Psest_2526 at 2707.021 kb on + strand, within Psest_2526 at 2707.021 kb on + strand, within Psest_2526 at 2707.022 kb on - strand, within Psest_2526 at 2707.282 kb on + strand, within Psest_2526 at 2707.282 kb on + strand, within Psest_2526 at 2707.282 kb on + strand, within Psest_2526 at 2707.282 kb on + strand, within Psest_2526 at 2707.282 kb on + strand, within Psest_2526 at 2707.282 kb on + strand, within Psest_2526 at 2707.283 kb on - strand, within Psest_2526 at 2707.283 kb on - strand, within Psest_2526 at 2707.376 kb on - strand, within Psest_2526 at 2707.376 kb on - strand, within Psest_2526 at 2707.450 kb on + strand at 2707.450 kb on + strand at 2707.451 kb on - strand at 2707.486 kb on + strand at 2707.487 kb on - strand at 2707.492 kb on + strand at 2707.531 kb on + strand at 2707.532 kb on - strand at 2707.538 kb on + strand at 2707.658 kb on + strand at 2707.658 kb on + strand at 2707.658 kb on + strand at 2707.659 kb on - strand at 2707.659 kb on - strand at 2707.659 kb on - strand at 2707.689 kb on - strand at 2707.768 kb on + strand at 2707.835 kb on - strand at 2707.868 kb on + strand at 2707.898 kb on + strand at 2707.899 kb on - strand at 2707.899 kb on - strand at 2707.899 kb on - strand at 2707.899 kb on - strand at 2707.912 kb on + strand at 2707.912 kb on + strand at 2707.912 kb on + strand at 2707.912 kb on + strand at 2707.913 kb on - strand at 2707.913 kb on - strand at 2707.913 kb on - strand at 2707.913 kb on - strand at 2707.914 kb on + strand at 2707.914 kb on + strand at 2707.914 kb on + strand at 2707.914 kb on + strand at 2707.914 kb on + strand at 2707.915 kb on - strand at 2707.915 kb on - strand at 2707.915 kb on - strand at 2707.915 kb on - strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.918 kb on + strand at 2707.919 kb on - strand at 2707.919 kb on - strand at 2707.919 kb on - strand at 2707.919 kb on - strand at 2707.919 kb on - strand at 2707.919 kb on - strand at 2707.919 kb on - strand at 2707.919 kb on - strand at 2707.921 kb on - strand at 2707.921 kb on - strand at 2707.921 kb on - strand at 2707.921 kb on - strand at 2708.122 kb on + strand, within Psest_2527 at 2708.122 kb on + strand, within Psest_2527 at 2708.122 kb on + strand, within Psest_2527 at 2708.123 kb on - strand, within Psest_2527 at 2708.123 kb on - strand, within Psest_2527 at 2708.123 kb on - strand, within Psest_2527 at 2708.123 kb on - strand, within Psest_2527 at 2708.308 kb on + strand, within Psest_2527 at 2708.309 kb on - strand, within Psest_2527 at 2708.309 kb on - strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.359 kb on + strand, within Psest_2527 at 2708.360 kb on - strand, within Psest_2527 at 2708.360 kb on - strand, within Psest_2527 at 2708.360 kb on - strand, within Psest_2527
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,705,638 + Psest_2524 0.83 +1.1 2,705,638 + Psest_2524 0.83 -1.4 2,705,639 - Psest_2524 0.83 -2.4 2,705,812 + -2.1 2,705,813 - -1.5 2,705,887 + -2.8 2,705,887 + -2.1 2,705,888 - -2.1 2,705,891 + -2.0 2,706,071 + Psest_2525 0.29 -2.6 2,706,071 + Psest_2525 0.29 -0.6 2,706,071 + Psest_2525 0.29 -1.2 2,706,149 + Psest_2525 0.42 +0.6 2,706,149 + Psest_2525 0.42 +0.3 2,706,149 + Psest_2525 0.42 -1.4 2,706,149 + Psest_2525 0.42 -1.7 2,706,149 + Psest_2525 0.42 -2.9 2,706,206 - Psest_2525 0.51 -1.0 2,706,465 - +0.6 2,706,592 + -1.3 2,706,592 + -0.7 2,706,593 - -2.9 2,706,619 + -2.5 2,706,620 - -0.4 2,706,620 - +0.1 2,706,745 + Psest_2526 0.16 +0.6 2,706,745 + Psest_2526 0.16 -1.1 2,706,925 + Psest_2526 0.35 -0.9 2,706,946 + Psest_2526 0.37 +0.3 2,706,946 + Psest_2526 0.37 -2.4 2,707,021 + Psest_2526 0.45 -3.9 2,707,021 + Psest_2526 0.45 -2.3 2,707,021 + Psest_2526 0.45 -1.2 2,707,022 - Psest_2526 0.45 -2.8 2,707,282 + Psest_2526 0.73 -2.5 2,707,282 + Psest_2526 0.73 -0.1 2,707,282 + Psest_2526 0.73 -2.5 2,707,282 + Psest_2526 0.73 -1.6 2,707,282 + Psest_2526 0.73 -1.8 2,707,282 + Psest_2526 0.73 -1.8 2,707,283 - Psest_2526 0.73 +0.1 2,707,283 - Psest_2526 0.73 -0.8 2,707,376 - Psest_2526 0.83 +0.0 2,707,376 - Psest_2526 0.83 -2.5 2,707,450 + -1.0 2,707,450 + -3.4 2,707,451 - -1.0 2,707,486 + -1.3 2,707,487 - -0.8 2,707,492 + -2.7 2,707,531 + -2.2 2,707,532 - +2.9 2,707,538 + -2.1 2,707,658 + +0.4 2,707,658 + +0.4 2,707,658 + -1.7 2,707,659 - -3.1 2,707,659 - -4.3 2,707,659 - -3.2 2,707,689 - -1.2 2,707,768 + -0.4 2,707,835 - +0.6 2,707,868 + +2.0 2,707,898 + -1.6 2,707,899 - -1.5 2,707,899 - +0.0 2,707,899 - -0.9 2,707,899 - +0.6 2,707,912 + -0.6 2,707,912 + -1.4 2,707,912 + -1.9 2,707,912 + -1.2 2,707,913 - -2.1 2,707,913 - -1.2 2,707,913 - +0.0 2,707,913 - -0.4 2,707,914 + -1.0 2,707,914 + -0.4 2,707,914 + +0.0 2,707,914 + +0.0 2,707,914 + +0.6 2,707,915 - -0.6 2,707,915 - -1.7 2,707,915 - -2.1 2,707,915 - +1.0 2,707,918 + -0.7 2,707,918 + -0.6 2,707,918 + -1.7 2,707,918 + -1.3 2,707,918 + -1.7 2,707,918 + +1.0 2,707,918 + -2.9 2,707,918 + -1.4 2,707,918 + +0.0 2,707,918 + -0.9 2,707,919 - +1.0 2,707,919 - -0.4 2,707,919 - +0.0 2,707,919 - -1.9 2,707,919 - -1.2 2,707,919 - -1.3 2,707,919 - -0.2 2,707,919 - -0.2 2,707,921 - -0.2 2,707,921 - -0.6 2,707,921 - +0.6 2,707,921 - -1.1 2,708,122 + Psest_2527 0.17 -2.5 2,708,122 + Psest_2527 0.17 -0.4 2,708,122 + Psest_2527 0.17 -1.1 2,708,123 - Psest_2527 0.17 -1.6 2,708,123 - Psest_2527 0.17 -1.9 2,708,123 - Psest_2527 0.17 -1.4 2,708,123 - Psest_2527 0.17 +0.3 2,708,308 + Psest_2527 0.30 -1.5 2,708,309 - Psest_2527 0.30 -1.2 2,708,309 - Psest_2527 0.30 -0.7 2,708,359 + Psest_2527 0.33 -1.2 2,708,359 + Psest_2527 0.33 +0.2 2,708,359 + Psest_2527 0.33 -1.1 2,708,359 + Psest_2527 0.33 -2.5 2,708,359 + Psest_2527 0.33 -1.6 2,708,359 + Psest_2527 0.33 -1.5 2,708,359 + Psest_2527 0.33 -1.9 2,708,359 + Psest_2527 0.33 -1.0 2,708,359 + Psest_2527 0.33 -0.2 2,708,359 + Psest_2527 0.33 -1.3 2,708,359 + Psest_2527 0.33 -0.6 2,708,359 + Psest_2527 0.33 +0.6 2,708,360 - Psest_2527 0.33 -2.3 2,708,360 - Psest_2527 0.33 -0.6 2,708,360 - Psest_2527 0.33 -1.4
Or see this region's nucleotide sequence