Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2416 and Psest_2417 are separated by 74 nucleotides
Psest_2416: Psest_2416 - 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase), at 2,575,200 to 2,577,116
_2416
Psest_2417: Psest_2417 - TonB-dependent receptor, at 2,577,191 to 2,579,674
_2417
Position (kb)
2577
2578
2579
2580 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2576.527 kb on + strand, within Psest_2416 at 2576.743 kb on + strand, within Psest_2416 at 2577.223 kb on - strand at 2577.223 kb on - strand at 2577.223 kb on - strand at 2577.255 kb on + strand at 2577.255 kb on + strand at 2577.255 kb on + strand at 2577.255 kb on + strand at 2577.256 kb on - strand at 2577.256 kb on - strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.279 kb on + strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.280 kb on - strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.282 kb on + strand at 2577.283 kb on - strand at 2577.283 kb on - strand at 2577.381 kb on + strand at 2577.381 kb on + strand at 2577.381 kb on + strand at 2577.426 kb on + strand at 2577.427 kb on - strand at 2577.438 kb on + strand at 2577.438 kb on + strand at 2577.439 kb on - strand at 2577.439 kb on - strand at 2577.590 kb on + strand, within Psest_2417 at 2577.591 kb on - strand, within Psest_2417 at 2577.657 kb on + strand, within Psest_2417 at 2577.741 kb on + strand, within Psest_2417 at 2577.741 kb on + strand, within Psest_2417 at 2577.741 kb on + strand, within Psest_2417 at 2577.742 kb on - strand, within Psest_2417 at 2577.742 kb on - strand, within Psest_2417 at 2577.742 kb on - strand, within Psest_2417 at 2577.765 kb on + strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.766 kb on - strand, within Psest_2417 at 2577.774 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.804 kb on + strand, within Psest_2417 at 2577.805 kb on - strand, within Psest_2417 at 2577.825 kb on + strand, within Psest_2417 at 2578.200 kb on + strand, within Psest_2417 at 2578.201 kb on - strand, within Psest_2417 at 2578.201 kb on - strand, within Psest_2417 at 2578.422 kb on + strand, within Psest_2417 at 2578.518 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.695 kb on + strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.696 kb on - strand, within Psest_2417 at 2578.833 kb on + strand, within Psest_2417 at 2578.833 kb on + strand, within Psest_2417 at 2578.834 kb on - strand, within Psest_2417 at 2578.849 kb on - strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.851 kb on + strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.852 kb on - strand, within Psest_2417 at 2578.875 kb on + strand, within Psest_2417 at 2578.876 kb on - strand, within Psest_2417 at 2578.876 kb on - strand, within Psest_2417 at 2578.876 kb on - strand, within Psest_2417 at 2579.151 kb on + strand, within Psest_2417 at 2579.151 kb on + strand, within Psest_2417 at 2579.151 kb on + strand, within Psest_2417 at 2579.152 kb on - strand, within Psest_2417 at 2579.664 kb on + strand at 2579.664 kb on + strand at 2579.665 kb on - strand at 2579.665 kb on - strand at 2579.665 kb on - strand at 2579.821 kb on + strand at 2579.988 kb on - strand at 2580.013 kb on - strand at 2580.013 kb on - strand at 2580.133 kb on + strand at 2580.134 kb on - strand at 2580.295 kb on - strand at 2580.546 kb on + strand at 2580.546 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,576,527 + Psest_2416 0.69 -0.8 2,576,743 + Psest_2416 0.80 +2.6 2,577,223 - -0.9 2,577,223 - -0.4 2,577,223 - +0.4 2,577,255 + -1.0 2,577,255 + +1.6 2,577,255 + -0.2 2,577,255 + +2.8 2,577,256 - +0.6 2,577,256 - +1.6 2,577,279 + -0.8 2,577,279 + +0.2 2,577,279 + +4.0 2,577,279 + +1.1 2,577,279 + +1.0 2,577,279 + +0.6 2,577,279 + +1.0 2,577,280 - -0.2 2,577,280 - -0.0 2,577,280 - -0.9 2,577,280 - +2.2 2,577,280 - +1.6 2,577,280 - -0.6 2,577,280 - +3.6 2,577,280 - +1.7 2,577,280 - +0.6 2,577,280 - +1.6 2,577,280 - -1.7 2,577,282 + -0.0 2,577,282 + +3.6 2,577,282 + -0.8 2,577,282 + -0.4 2,577,282 + +1.0 2,577,282 + -0.1 2,577,283 - +1.0 2,577,283 - +1.0 2,577,381 + +1.0 2,577,381 + -0.8 2,577,381 + +0.6 2,577,426 + -0.9 2,577,427 - -1.8 2,577,438 + +0.2 2,577,438 + +1.0 2,577,439 - +1.0 2,577,439 - -0.2 2,577,590 + Psest_2417 0.16 +2.0 2,577,591 - Psest_2417 0.16 +0.2 2,577,657 + Psest_2417 0.19 +0.2 2,577,741 + Psest_2417 0.22 -0.4 2,577,741 + Psest_2417 0.22 -0.0 2,577,741 + Psest_2417 0.22 +0.1 2,577,742 - Psest_2417 0.22 +1.6 2,577,742 - Psest_2417 0.22 +1.0 2,577,742 - Psest_2417 0.22 +1.6 2,577,765 + Psest_2417 0.23 +1.6 2,577,766 - Psest_2417 0.23 +1.8 2,577,766 - Psest_2417 0.23 -0.2 2,577,766 - Psest_2417 0.23 +0.6 2,577,766 - Psest_2417 0.23 +2.0 2,577,766 - Psest_2417 0.23 +0.4 2,577,766 - Psest_2417 0.23 +1.6 2,577,774 + Psest_2417 0.23 +1.3 2,577,804 + Psest_2417 0.25 +2.0 2,577,804 + Psest_2417 0.25 +0.8 2,577,804 + Psest_2417 0.25 +1.0 2,577,804 + Psest_2417 0.25 -0.0 2,577,804 + Psest_2417 0.25 +1.1 2,577,804 + Psest_2417 0.25 -1.1 2,577,804 + Psest_2417 0.25 +0.1 2,577,805 - Psest_2417 0.25 +1.6 2,577,825 + Psest_2417 0.26 +0.9 2,578,200 + Psest_2417 0.41 +0.1 2,578,201 - Psest_2417 0.41 -0.7 2,578,201 - Psest_2417 0.41 -0.0 2,578,422 + Psest_2417 0.50 -1.1 2,578,518 + Psest_2417 0.53 +0.1 2,578,695 + Psest_2417 0.61 -0.9 2,578,695 + Psest_2417 0.61 -0.8 2,578,695 + Psest_2417 0.61 +0.6 2,578,695 + Psest_2417 0.61 +0.2 2,578,695 + Psest_2417 0.61 +0.6 2,578,695 + Psest_2417 0.61 -0.8 2,578,695 + Psest_2417 0.61 +1.6 2,578,695 + Psest_2417 0.61 +0.1 2,578,695 + Psest_2417 0.61 +1.2 2,578,696 - Psest_2417 0.61 -0.7 2,578,696 - Psest_2417 0.61 -1.0 2,578,696 - Psest_2417 0.61 -1.4 2,578,696 - Psest_2417 0.61 +1.6 2,578,696 - Psest_2417 0.61 -2.3 2,578,696 - Psest_2417 0.61 -0.0 2,578,696 - Psest_2417 0.61 +2.6 2,578,833 + Psest_2417 0.66 +0.2 2,578,833 + Psest_2417 0.66 -0.1 2,578,834 - Psest_2417 0.66 -0.4 2,578,849 - Psest_2417 0.67 +1.7 2,578,851 + Psest_2417 0.67 -0.8 2,578,851 + Psest_2417 0.67 +2.6 2,578,851 + Psest_2417 0.67 -1.1 2,578,851 + Psest_2417 0.67 -1.1 2,578,851 + Psest_2417 0.67 +0.8 2,578,852 - Psest_2417 0.67 -0.2 2,578,852 - Psest_2417 0.67 +0.7 2,578,852 - Psest_2417 0.67 +0.2 2,578,852 - Psest_2417 0.67 -0.4 2,578,852 - Psest_2417 0.67 +1.1 2,578,875 + Psest_2417 0.68 -0.0 2,578,876 - Psest_2417 0.68 -1.0 2,578,876 - Psest_2417 0.68 +1.0 2,578,876 - Psest_2417 0.68 +1.0 2,579,151 + Psest_2417 0.79 -0.3 2,579,151 + Psest_2417 0.79 -0.5 2,579,151 + Psest_2417 0.79 +2.2 2,579,152 - Psest_2417 0.79 +0.8 2,579,664 + -0.2 2,579,664 + -1.6 2,579,665 - -1.8 2,579,665 - -2.0 2,579,665 - +1.4 2,579,821 + +1.0 2,579,988 - -0.0 2,580,013 - +2.6 2,580,013 - -0.3 2,580,133 + -0.2 2,580,134 - -0.8 2,580,295 - -0.5 2,580,546 + +0.5 2,580,546 + +0.2
Or see this region's nucleotide sequence