Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2172 and Psest_2173 are separated by 299 nucleotides Psest_2173 and Psest_2174 are separated by 0 nucleotides
Psest_2172: Psest_2172 - glycogen/starch synthases, ADP-glucose type, at 2,328,816 to 2,330,366
_2172
Psest_2173: Psest_2173 - competence/damage-inducible protein CinA C-terminal domain, at 2,330,666 to 2,331,172
_2173
Psest_2174: Psest_2174 - Small-conductance mechanosensitive channel, at 2,331,173 to 2,332,252
_2174
Position (kb)
2330
2331
2332 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2329.672 kb on + strand, within Psest_2172 at 2329.787 kb on + strand, within Psest_2172 at 2329.788 kb on - strand, within Psest_2172 at 2329.810 kb on + strand, within Psest_2172 at 2329.810 kb on + strand, within Psest_2172 at 2329.810 kb on + strand, within Psest_2172 at 2329.810 kb on + strand, within Psest_2172 at 2329.810 kb on + strand, within Psest_2172 at 2329.810 kb on + strand, within Psest_2172 at 2329.810 kb on + strand, within Psest_2172 at 2329.811 kb on - strand, within Psest_2172 at 2329.811 kb on - strand, within Psest_2172 at 2330.011 kb on + strand, within Psest_2172 at 2330.011 kb on + strand, within Psest_2172 at 2330.011 kb on + strand, within Psest_2172 at 2330.011 kb on + strand, within Psest_2172 at 2330.011 kb on + strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.012 kb on - strand, within Psest_2172 at 2330.071 kb on + strand, within Psest_2172 at 2330.072 kb on - strand, within Psest_2172 at 2330.072 kb on - strand, within Psest_2172 at 2330.360 kb on + strand at 2330.412 kb on - strand at 2330.419 kb on + strand at 2330.420 kb on - strand at 2330.420 kb on - strand at 2330.420 kb on - strand at 2330.420 kb on - strand at 2330.429 kb on - strand at 2330.429 kb on - strand at 2330.429 kb on - strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.454 kb on + strand at 2330.455 kb on - strand at 2330.455 kb on - strand at 2330.455 kb on - strand at 2330.455 kb on - strand at 2330.474 kb on + strand at 2330.475 kb on - strand at 2330.475 kb on - strand at 2330.618 kb on - strand at 2330.618 kb on - strand at 2330.737 kb on + strand, within Psest_2173 at 2330.772 kb on + strand, within Psest_2173 at 2330.772 kb on + strand, within Psest_2173 at 2330.772 kb on + strand, within Psest_2173 at 2330.813 kb on + strand, within Psest_2173 at 2330.813 kb on + strand, within Psest_2173 at 2330.814 kb on - strand, within Psest_2173 at 2330.814 kb on - strand, within Psest_2173 at 2331.002 kb on + strand, within Psest_2173 at 2331.003 kb on - strand, within Psest_2173 at 2331.102 kb on - strand, within Psest_2173 at 2331.128 kb on + strand at 2331.138 kb on + strand at 2331.138 kb on + strand at 2331.170 kb on + strand at 2331.221 kb on - strand at 2331.319 kb on + strand, within Psest_2174 at 2331.413 kb on + strand, within Psest_2174 at 2331.413 kb on + strand, within Psest_2174 at 2331.435 kb on - strand, within Psest_2174 at 2331.435 kb on - strand, within Psest_2174 at 2331.435 kb on - strand, within Psest_2174 at 2331.515 kb on + strand, within Psest_2174 at 2331.516 kb on - strand, within Psest_2174 at 2331.516 kb on - strand, within Psest_2174 at 2331.577 kb on - strand, within Psest_2174 at 2331.577 kb on - strand, within Psest_2174 at 2331.577 kb on - strand, within Psest_2174 at 2331.577 kb on - strand, within Psest_2174 at 2331.577 kb on - strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.627 kb on + strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2331.628 kb on - strand, within Psest_2174 at 2332.031 kb on - strand, within Psest_2174 at 2332.052 kb on + strand, within Psest_2174 at 2332.080 kb on - strand, within Psest_2174 at 2332.106 kb on + strand, within Psest_2174 at 2332.106 kb on + strand, within Psest_2174 at 2332.106 kb on + strand, within Psest_2174 at 2332.107 kb on - strand, within Psest_2174 at 2332.107 kb on - strand, within Psest_2174 at 2332.107 kb on - strand, within Psest_2174
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,329,672 + Psest_2172 0.55 -1.1 2,329,787 + Psest_2172 0.63 +1.0 2,329,788 - Psest_2172 0.63 -0.2 2,329,810 + Psest_2172 0.64 -0.8 2,329,810 + Psest_2172 0.64 +0.4 2,329,810 + Psest_2172 0.64 +0.1 2,329,810 + Psest_2172 0.64 +0.7 2,329,810 + Psest_2172 0.64 -1.8 2,329,810 + Psest_2172 0.64 -1.3 2,329,810 + Psest_2172 0.64 -0.4 2,329,811 - Psest_2172 0.64 +1.3 2,329,811 - Psest_2172 0.64 -0.7 2,330,011 + Psest_2172 0.77 -0.2 2,330,011 + Psest_2172 0.77 +0.1 2,330,011 + Psest_2172 0.77 -2.3 2,330,011 + Psest_2172 0.77 -1.8 2,330,011 + Psest_2172 0.77 -1.6 2,330,012 - Psest_2172 0.77 -1.8 2,330,012 - Psest_2172 0.77 -0.2 2,330,012 - Psest_2172 0.77 +3.5 2,330,012 - Psest_2172 0.77 +0.9 2,330,012 - Psest_2172 0.77 +0.0 2,330,012 - Psest_2172 0.77 +0.0 2,330,012 - Psest_2172 0.77 -1.5 2,330,012 - Psest_2172 0.77 -0.4 2,330,071 + Psest_2172 0.81 +0.6 2,330,072 - Psest_2172 0.81 -1.6 2,330,072 - Psest_2172 0.81 +2.0 2,330,360 + -0.4 2,330,412 - +0.4 2,330,419 + -0.2 2,330,420 - +0.4 2,330,420 - -1.1 2,330,420 - +0.0 2,330,420 - +1.6 2,330,429 - +0.8 2,330,429 - +2.4 2,330,429 - +1.5 2,330,454 + -1.1 2,330,454 + -2.2 2,330,454 + +0.6 2,330,454 + +2.1 2,330,454 + -0.6 2,330,454 + +0.9 2,330,454 + -0.9 2,330,454 + -1.5 2,330,454 + +1.0 2,330,454 + -2.4 2,330,455 - +2.1 2,330,455 - -1.0 2,330,455 - +1.3 2,330,455 - -0.2 2,330,474 + +1.3 2,330,475 - +1.0 2,330,475 - +1.6 2,330,618 - +1.0 2,330,618 - -2.0 2,330,737 + Psest_2173 0.14 -1.6 2,330,772 + Psest_2173 0.21 -1.7 2,330,772 + Psest_2173 0.21 +1.2 2,330,772 + Psest_2173 0.21 -1.0 2,330,813 + Psest_2173 0.29 +2.9 2,330,813 + Psest_2173 0.29 +0.8 2,330,814 - Psest_2173 0.29 +0.6 2,330,814 - Psest_2173 0.29 +0.0 2,331,002 + Psest_2173 0.66 +0.3 2,331,003 - Psest_2173 0.66 +2.1 2,331,102 - Psest_2173 0.86 +2.6 2,331,128 + -0.3 2,331,138 + +1.3 2,331,138 + +0.0 2,331,170 + +1.1 2,331,221 - -1.4 2,331,319 + Psest_2174 0.14 +0.7 2,331,413 + Psest_2174 0.22 +2.6 2,331,413 + Psest_2174 0.22 -2.8 2,331,435 - Psest_2174 0.24 -0.4 2,331,435 - Psest_2174 0.24 -1.0 2,331,435 - Psest_2174 0.24 +0.5 2,331,515 + Psest_2174 0.32 +0.3 2,331,516 - Psest_2174 0.32 -0.4 2,331,516 - Psest_2174 0.32 +0.6 2,331,577 - Psest_2174 0.37 -0.1 2,331,577 - Psest_2174 0.37 +2.6 2,331,577 - Psest_2174 0.37 +3.1 2,331,577 - Psest_2174 0.37 -2.6 2,331,577 - Psest_2174 0.37 +1.2 2,331,627 + Psest_2174 0.42 +1.0 2,331,627 + Psest_2174 0.42 +0.4 2,331,627 + Psest_2174 0.42 +2.3 2,331,627 + Psest_2174 0.42 +2.1 2,331,627 + Psest_2174 0.42 +1.4 2,331,627 + Psest_2174 0.42 -0.6 2,331,627 + Psest_2174 0.42 +1.2 2,331,627 + Psest_2174 0.42 +0.3 2,331,627 + Psest_2174 0.42 -2.6 2,331,627 + Psest_2174 0.42 +3.1 2,331,627 + Psest_2174 0.42 -1.8 2,331,627 + Psest_2174 0.42 -0.1 2,331,627 + Psest_2174 0.42 +0.0 2,331,628 - Psest_2174 0.42 +0.6 2,331,628 - Psest_2174 0.42 -1.2 2,331,628 - Psest_2174 0.42 -0.5 2,331,628 - Psest_2174 0.42 -1.6 2,331,628 - Psest_2174 0.42 -1.3 2,331,628 - Psest_2174 0.42 -1.0 2,331,628 - Psest_2174 0.42 +1.8 2,331,628 - Psest_2174 0.42 -1.5 2,331,628 - Psest_2174 0.42 +0.2 2,332,031 - Psest_2174 0.79 +1.0 2,332,052 + Psest_2174 0.81 +0.6 2,332,080 - Psest_2174 0.84 -1.1 2,332,106 + Psest_2174 0.86 -0.4 2,332,106 + Psest_2174 0.86 -1.3 2,332,106 + Psest_2174 0.86 +0.0 2,332,107 - Psest_2174 0.86 -1.9 2,332,107 - Psest_2174 0.86 +0.7 2,332,107 - Psest_2174 0.86 -1.4
Or see this region's nucleotide sequence