Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2148 and Psest_2149 are separated by 53 nucleotides Psest_2149 and Psest_2150 are separated by 95 nucleotides
Psest_2148: Psest_2148 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,294,108 to 2,294,965
_2148
Psest_2149: Psest_2149 - Ku protein, prokaryotic, at 2,295,019 to 2,295,900
_2149
Psest_2150: Psest_2150 - DNA polymerase LigD, polymerase domain, at 2,295,996 to 2,296,919
_2150
Position (kb)
2295
2296 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2294.019 kb on - strand at 2294.091 kb on + strand at 2294.091 kb on + strand at 2294.092 kb on - strand at 2294.130 kb on + strand at 2294.204 kb on + strand, within Psest_2148 at 2294.205 kb on - strand, within Psest_2148 at 2294.205 kb on - strand, within Psest_2148 at 2294.205 kb on - strand, within Psest_2148 at 2294.321 kb on + strand, within Psest_2148 at 2294.372 kb on + strand, within Psest_2148 at 2294.373 kb on - strand, within Psest_2148 at 2294.596 kb on - strand, within Psest_2148 at 2294.882 kb on + strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.889 kb on - strand at 2294.889 kb on - strand at 2294.912 kb on + strand at 2294.913 kb on - strand at 2294.913 kb on - strand at 2294.913 kb on - strand at 2295.062 kb on + strand at 2295.217 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.352 kb on + strand, within Psest_2149 at 2295.353 kb on - strand, within Psest_2149 at 2295.385 kb on + strand, within Psest_2149 at 2295.446 kb on + strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.541 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.650 kb on - strand, within Psest_2149 at 2296.110 kb on + strand, within Psest_2150 at 2296.114 kb on - strand, within Psest_2150 at 2296.114 kb on - strand, within Psest_2150 at 2296.821 kb on + strand, within Psest_2150
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,294,019 - -0.6 2,294,091 + +2.1 2,294,091 + -0.1 2,294,092 - -0.3 2,294,130 + +0.1 2,294,204 + Psest_2148 0.11 -0.8 2,294,205 - Psest_2148 0.11 -2.2 2,294,205 - Psest_2148 0.11 +3.1 2,294,205 - Psest_2148 0.11 -0.6 2,294,321 + Psest_2148 0.25 +0.4 2,294,372 + Psest_2148 0.31 -1.0 2,294,373 - Psest_2148 0.31 -0.6 2,294,596 - Psest_2148 0.57 +0.7 2,294,882 + -1.0 2,294,883 - +0.4 2,294,883 - -0.1 2,294,883 - -0.8 2,294,883 - +0.4 2,294,883 - -0.1 2,294,883 - +0.2 2,294,883 - +1.1 2,294,889 - -1.0 2,294,889 - -0.8 2,294,912 + +1.3 2,294,913 - +2.9 2,294,913 - +1.6 2,294,913 - -0.3 2,295,062 + +1.2 2,295,217 + Psest_2149 0.22 +0.4 2,295,232 + Psest_2149 0.24 +0.4 2,295,232 + Psest_2149 0.24 -2.1 2,295,232 + Psest_2149 0.24 -0.3 2,295,233 - Psest_2149 0.24 +1.2 2,295,233 - Psest_2149 0.24 +1.5 2,295,233 - Psest_2149 0.24 -0.6 2,295,233 - Psest_2149 0.24 -0.6 2,295,233 - Psest_2149 0.24 -1.0 2,295,233 - Psest_2149 0.24 -1.2 2,295,233 - Psest_2149 0.24 +1.7 2,295,334 + Psest_2149 0.36 -0.1 2,295,334 + Psest_2149 0.36 +0.4 2,295,334 + Psest_2149 0.36 +0.6 2,295,335 - Psest_2149 0.36 +2.3 2,295,335 - Psest_2149 0.36 -0.4 2,295,335 - Psest_2149 0.36 +1.4 2,295,335 - Psest_2149 0.36 +0.7 2,295,349 + Psest_2149 0.37 -0.3 2,295,349 + Psest_2149 0.37 +0.5 2,295,350 - Psest_2149 0.38 +0.4 2,295,350 - Psest_2149 0.38 +0.2 2,295,350 - Psest_2149 0.38 +2.1 2,295,350 - Psest_2149 0.38 -1.0 2,295,352 + Psest_2149 0.38 -0.3 2,295,353 - Psest_2149 0.38 +0.9 2,295,385 + Psest_2149 0.41 -1.6 2,295,446 + Psest_2149 0.48 +0.5 2,295,447 - Psest_2149 0.49 -0.3 2,295,447 - Psest_2149 0.49 +0.4 2,295,450 + Psest_2149 0.49 +1.3 2,295,450 + Psest_2149 0.49 -0.5 2,295,450 + Psest_2149 0.49 +1.7 2,295,450 + Psest_2149 0.49 +1.5 2,295,451 - Psest_2149 0.49 -0.0 2,295,451 - Psest_2149 0.49 +2.4 2,295,451 - Psest_2149 0.49 +3.3 2,295,541 + Psest_2149 0.59 -1.7 2,295,649 + Psest_2149 0.71 +1.4 2,295,649 + Psest_2149 0.71 -1.8 2,295,649 + Psest_2149 0.71 -1.7 2,295,649 + Psest_2149 0.71 +0.7 2,295,650 - Psest_2149 0.72 +0.4 2,296,110 + Psest_2150 0.12 +2.7 2,296,114 - Psest_2150 0.13 -1.0 2,296,114 - Psest_2150 0.13 -2.2 2,296,821 + Psest_2150 0.89 +0.1
Or see this region's nucleotide sequence