Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2129 and Psest_2130 are separated by 94 nucleotides Psest_2130 and Psest_2131 are separated by 202 nucleotides Psest_2131 and Psest_2132 are separated by 63 nucleotides
Psest_2129: Psest_2129 - ABC-type phosphate transport system, periplasmic component, at 2,261,066 to 2,262,424
_2129
Psest_2130: Psest_2130 - exodeoxyribonuclease III, at 2,262,519 to 2,263,331
_2130
Psest_2131: Psest_2131 - Acetyltransferases, at 2,263,534 to 2,264,169
_2131
Psest_2132: Psest_2132 - Outer membrane protein, at 2,264,233 to 2,266,047
_2132
Position (kb)
2262
2263
2264 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2261.535 kb on + strand, within Psest_2129 at 2261.535 kb on + strand, within Psest_2129 at 2261.535 kb on + strand, within Psest_2129 at 2261.535 kb on + strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2262.150 kb on + strand, within Psest_2129 at 2262.151 kb on - strand, within Psest_2129 at 2262.440 kb on + strand at 2262.440 kb on + strand at 2262.440 kb on + strand at 2262.441 kb on - strand at 2262.441 kb on - strand at 2262.441 kb on - strand at 2262.441 kb on - strand at 2262.457 kb on - strand at 2262.501 kb on + strand at 2262.502 kb on - strand at 2262.634 kb on + strand, within Psest_2130 at 2262.635 kb on - strand, within Psest_2130 at 2262.635 kb on - strand, within Psest_2130 at 2262.943 kb on + strand, within Psest_2130 at 2262.944 kb on - strand, within Psest_2130 at 2263.145 kb on - strand, within Psest_2130 at 2263.165 kb on + strand, within Psest_2130 at 2263.350 kb on + strand at 2263.445 kb on - strand at 2263.445 kb on - strand at 2263.445 kb on - strand at 2263.455 kb on - strand at 2263.492 kb on + strand at 2263.493 kb on - strand at 2263.601 kb on - strand, within Psest_2131 at 2263.601 kb on - strand, within Psest_2131 at 2263.633 kb on + strand, within Psest_2131 at 2263.713 kb on - strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.938 kb on - strand, within Psest_2131 at 2263.938 kb on - strand, within Psest_2131 at 2264.065 kb on + strand, within Psest_2131 at 2264.168 kb on - strand at 2264.260 kb on - strand at 2264.270 kb on + strand at 2264.306 kb on + strand at 2264.307 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,261,535 + Psest_2129 0.35 +1.0 2,261,535 + Psest_2129 0.35 -2.0 2,261,535 + Psest_2129 0.35 -0.4 2,261,535 + Psest_2129 0.35 +1.9 2,261,536 - Psest_2129 0.35 +0.4 2,261,536 - Psest_2129 0.35 +0.4 2,261,536 - Psest_2129 0.35 +0.4 2,261,536 - Psest_2129 0.35 -1.6 2,261,536 - Psest_2129 0.35 -1.4 2,261,574 + Psest_2129 0.37 -1.5 2,261,574 + Psest_2129 0.37 -0.6 2,261,574 + Psest_2129 0.37 +0.7 2,261,574 + Psest_2129 0.37 -0.9 2,261,826 + Psest_2129 0.56 -1.4 2,261,826 + Psest_2129 0.56 -0.5 2,261,826 + Psest_2129 0.56 +0.1 2,261,826 + Psest_2129 0.56 +0.7 2,261,826 + Psest_2129 0.56 -1.1 2,261,827 - Psest_2129 0.56 -1.6 2,261,827 - Psest_2129 0.56 -1.2 2,261,827 - Psest_2129 0.56 -1.1 2,261,827 - Psest_2129 0.56 +1.4 2,261,827 - Psest_2129 0.56 +0.4 2,261,827 - Psest_2129 0.56 -0.3 2,261,827 - Psest_2129 0.56 -1.9 2,261,827 - Psest_2129 0.56 -0.2 2,261,827 - Psest_2129 0.56 -0.9 2,261,827 - Psest_2129 0.56 -0.6 2,262,150 + Psest_2129 0.80 +0.4 2,262,151 - Psest_2129 0.80 -2.1 2,262,440 + +2.8 2,262,440 + +0.0 2,262,440 + -0.3 2,262,441 - +0.1 2,262,441 - +2.4 2,262,441 - -2.1 2,262,441 - -1.5 2,262,457 - +3.5 2,262,501 + -2.6 2,262,502 - +1.2 2,262,634 + Psest_2130 0.14 -1.1 2,262,635 - Psest_2130 0.14 +0.4 2,262,635 - Psest_2130 0.14 -0.6 2,262,943 + Psest_2130 0.52 -0.7 2,262,944 - Psest_2130 0.52 -0.9 2,263,145 - Psest_2130 0.77 +0.0 2,263,165 + Psest_2130 0.79 -2.9 2,263,350 + +0.3 2,263,445 - +0.2 2,263,445 - -2.7 2,263,445 - -0.3 2,263,455 - -1.6 2,263,492 + -1.0 2,263,493 - -0.5 2,263,601 - Psest_2131 0.11 -0.1 2,263,601 - Psest_2131 0.11 +0.4 2,263,633 + Psest_2131 0.16 -2.1 2,263,713 - Psest_2131 0.28 -1.6 2,263,937 + Psest_2131 0.63 +1.8 2,263,937 + Psest_2131 0.63 -1.3 2,263,937 + Psest_2131 0.63 -1.3 2,263,937 + Psest_2131 0.63 +1.0 2,263,938 - Psest_2131 0.64 -1.4 2,263,938 - Psest_2131 0.64 +2.0 2,264,065 + Psest_2131 0.83 -0.1 2,264,168 - -0.1 2,264,260 - -0.6 2,264,270 + -0.8 2,264,306 + -2.2 2,264,307 - +2.0
Or see this region's nucleotide sequence