Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2128 and Psest_2129 are separated by 67 nucleotides Psest_2129 and Psest_2130 are separated by 94 nucleotides
Psest_2128: Psest_2128 - Acyl-CoA dehydrogenases, at 2,259,772 to 2,260,998
_2128
Psest_2129: Psest_2129 - ABC-type phosphate transport system, periplasmic component, at 2,261,066 to 2,262,424
_2129
Psest_2130: Psest_2130 - exodeoxyribonuclease III, at 2,262,519 to 2,263,331
_2130
Position (kb)
2261
2262
2263 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2260.207 kb on - strand, within Psest_2128 at 2260.669 kb on + strand, within Psest_2128 at 2260.670 kb on - strand, within Psest_2128 at 2260.670 kb on - strand, within Psest_2128 at 2260.729 kb on + strand, within Psest_2128 at 2260.729 kb on + strand, within Psest_2128 at 2260.729 kb on + strand, within Psest_2128 at 2260.966 kb on + strand at 2260.966 kb on + strand at 2260.966 kb on + strand at 2260.966 kb on + strand at 2260.967 kb on - strand at 2260.967 kb on - strand at 2260.967 kb on - strand at 2260.967 kb on - strand at 2261.070 kb on + strand at 2261.422 kb on - strand, within Psest_2129 at 2261.535 kb on + strand, within Psest_2129 at 2261.535 kb on + strand, within Psest_2129 at 2261.535 kb on + strand, within Psest_2129 at 2261.535 kb on + strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.536 kb on - strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.574 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.826 kb on + strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2261.827 kb on - strand, within Psest_2129 at 2262.150 kb on + strand, within Psest_2129 at 2262.151 kb on - strand, within Psest_2129 at 2262.440 kb on + strand at 2262.440 kb on + strand at 2262.440 kb on + strand at 2262.441 kb on - strand at 2262.441 kb on - strand at 2262.441 kb on - strand at 2262.441 kb on - strand at 2262.457 kb on - strand at 2262.501 kb on + strand at 2262.502 kb on - strand at 2262.634 kb on + strand, within Psest_2130 at 2262.635 kb on - strand, within Psest_2130 at 2262.635 kb on - strand, within Psest_2130 at 2262.943 kb on + strand, within Psest_2130 at 2262.944 kb on - strand, within Psest_2130 at 2263.145 kb on - strand, within Psest_2130 at 2263.165 kb on + strand, within Psest_2130 at 2263.350 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,260,207 - Psest_2128 0.35 +0.5 2,260,669 + Psest_2128 0.73 -0.5 2,260,670 - Psest_2128 0.73 -1.0 2,260,670 - Psest_2128 0.73 +2.4 2,260,729 + Psest_2128 0.78 +0.5 2,260,729 + Psest_2128 0.78 +0.9 2,260,729 + Psest_2128 0.78 +0.6 2,260,966 + +0.1 2,260,966 + +0.1 2,260,966 + -0.9 2,260,966 + -1.5 2,260,967 - +1.9 2,260,967 - +1.1 2,260,967 - +0.4 2,260,967 - -0.8 2,261,070 + -1.1 2,261,422 - Psest_2129 0.26 +0.1 2,261,535 + Psest_2129 0.35 +1.0 2,261,535 + Psest_2129 0.35 -2.0 2,261,535 + Psest_2129 0.35 -0.4 2,261,535 + Psest_2129 0.35 +1.9 2,261,536 - Psest_2129 0.35 +0.4 2,261,536 - Psest_2129 0.35 +0.4 2,261,536 - Psest_2129 0.35 +0.4 2,261,536 - Psest_2129 0.35 -1.6 2,261,536 - Psest_2129 0.35 -1.4 2,261,574 + Psest_2129 0.37 -1.5 2,261,574 + Psest_2129 0.37 -0.6 2,261,574 + Psest_2129 0.37 +0.7 2,261,574 + Psest_2129 0.37 -0.9 2,261,826 + Psest_2129 0.56 -1.4 2,261,826 + Psest_2129 0.56 -0.5 2,261,826 + Psest_2129 0.56 +0.1 2,261,826 + Psest_2129 0.56 +0.7 2,261,826 + Psest_2129 0.56 -1.1 2,261,827 - Psest_2129 0.56 -1.6 2,261,827 - Psest_2129 0.56 -1.2 2,261,827 - Psest_2129 0.56 -1.1 2,261,827 - Psest_2129 0.56 +1.4 2,261,827 - Psest_2129 0.56 +0.4 2,261,827 - Psest_2129 0.56 -0.3 2,261,827 - Psest_2129 0.56 -1.9 2,261,827 - Psest_2129 0.56 -0.2 2,261,827 - Psest_2129 0.56 -0.9 2,261,827 - Psest_2129 0.56 -0.6 2,262,150 + Psest_2129 0.80 +0.4 2,262,151 - Psest_2129 0.80 -2.1 2,262,440 + +2.8 2,262,440 + +0.0 2,262,440 + -0.3 2,262,441 - +0.1 2,262,441 - +2.4 2,262,441 - -2.1 2,262,441 - -1.5 2,262,457 - +3.5 2,262,501 + -2.6 2,262,502 - +1.2 2,262,634 + Psest_2130 0.14 -1.1 2,262,635 - Psest_2130 0.14 +0.4 2,262,635 - Psest_2130 0.14 -0.6 2,262,943 + Psest_2130 0.52 -0.7 2,262,944 - Psest_2130 0.52 -0.9 2,263,145 - Psest_2130 0.77 +0.0 2,263,165 + Psest_2130 0.79 -2.9 2,263,350 + +0.3
Or see this region's nucleotide sequence