Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2105 and Psest_2106 are separated by 2 nucleotides Psest_2106 and Psest_2107 are separated by 27 nucleotides
Psest_2105: Psest_2105 - Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,235,466 to 2,236,449
_2105
Psest_2106: Psest_2106 - diguanylate cyclase (GGDEF) domain, at 2,236,452 to 2,237,408
_2106
Psest_2107: Psest_2107 - Topoisomerase IB, at 2,237,436 to 2,238,380
_2107
Position (kb)
2236
2237
2238 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2235.521 kb on + strand at 2235.522 kb on - strand at 2235.522 kb on - strand at 2235.738 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.874 kb on - strand, within Psest_2105 at 2235.874 kb on - strand, within Psest_2105 at 2236.047 kb on + strand, within Psest_2105 at 2236.047 kb on + strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.122 kb on - strand, within Psest_2105 at 2236.141 kb on - strand, within Psest_2105 at 2236.157 kb on - strand, within Psest_2105 at 2236.157 kb on - strand, within Psest_2105 at 2236.265 kb on + strand, within Psest_2105 at 2236.299 kb on - strand, within Psest_2105 at 2236.348 kb on + strand, within Psest_2105 at 2236.349 kb on - strand, within Psest_2105 at 2236.349 kb on - strand, within Psest_2105 at 2236.439 kb on + strand at 2236.623 kb on - strand, within Psest_2106 at 2236.743 kb on + strand, within Psest_2106 at 2236.744 kb on - strand, within Psest_2106 at 2236.776 kb on + strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.831 kb on + strand, within Psest_2106 at 2236.831 kb on + strand, within Psest_2106 at 2236.832 kb on - strand, within Psest_2106 at 2236.832 kb on - strand, within Psest_2106 at 2236.845 kb on + strand, within Psest_2106 at 2236.846 kb on - strand, within Psest_2106 at 2236.861 kb on + strand, within Psest_2106 at 2236.941 kb on + strand, within Psest_2106 at 2236.942 kb on - strand, within Psest_2106 at 2236.942 kb on - strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.358 kb on + strand at 2237.358 kb on + strand at 2237.358 kb on + strand at 2237.358 kb on + strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.567 kb on + strand, within Psest_2107 at 2237.568 kb on - strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.569 kb on + strand, within Psest_2107 at 2237.570 kb on - strand, within Psest_2107 at 2237.570 kb on - strand, within Psest_2107 at 2237.570 kb on - strand, within Psest_2107 at 2237.570 kb on - strand, within Psest_2107 at 2237.570 kb on - strand, within Psest_2107 at 2237.570 kb on - strand, within Psest_2107 at 2237.654 kb on + strand, within Psest_2107 at 2237.655 kb on - strand, within Psest_2107 at 2237.655 kb on - strand, within Psest_2107 at 2237.757 kb on + strand, within Psest_2107 at 2237.757 kb on + strand, within Psest_2107 at 2237.761 kb on + strand, within Psest_2107 at 2237.761 kb on + strand, within Psest_2107 at 2237.762 kb on - strand, within Psest_2107 at 2237.888 kb on + strand, within Psest_2107 at 2237.889 kb on - strand, within Psest_2107 at 2237.963 kb on + strand, within Psest_2107 at 2237.983 kb on + strand, within Psest_2107 at 2237.984 kb on - strand, within Psest_2107 at 2237.984 kb on - strand, within Psest_2107 at 2238.157 kb on + strand, within Psest_2107 at 2238.157 kb on + strand, within Psest_2107 at 2238.157 kb on + strand, within Psest_2107 at 2238.270 kb on + strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.280 kb on + strand, within Psest_2107 at 2238.291 kb on + strand at 2238.358 kb on + strand at 2238.358 kb on + strand at 2238.358 kb on + strand at 2238.359 kb on - strand at 2238.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,235,521 + +0.2 2,235,522 - +0.7 2,235,522 - -0.2 2,235,738 - Psest_2105 0.28 -2.0 2,235,840 - Psest_2105 0.38 -0.9 2,235,840 - Psest_2105 0.38 -0.2 2,235,840 - Psest_2105 0.38 +3.7 2,235,840 - Psest_2105 0.38 -0.7 2,235,874 - Psest_2105 0.41 -0.2 2,235,874 - Psest_2105 0.41 +0.3 2,236,047 + Psest_2105 0.59 -1.7 2,236,047 + Psest_2105 0.59 +0.3 2,236,067 - Psest_2105 0.61 -2.2 2,236,067 - Psest_2105 0.61 -1.1 2,236,067 - Psest_2105 0.61 +2.0 2,236,067 - Psest_2105 0.61 +1.1 2,236,122 - Psest_2105 0.67 +0.2 2,236,141 - Psest_2105 0.69 -0.9 2,236,157 - Psest_2105 0.70 -0.8 2,236,157 - Psest_2105 0.70 -0.7 2,236,265 + Psest_2105 0.81 +0.3 2,236,299 - Psest_2105 0.85 -0.5 2,236,348 + Psest_2105 0.90 +1.2 2,236,349 - Psest_2105 0.90 +1.3 2,236,349 - Psest_2105 0.90 +0.5 2,236,439 + -0.4 2,236,623 - Psest_2106 0.18 -0.7 2,236,743 + Psest_2106 0.30 +0.4 2,236,744 - Psest_2106 0.31 +1.4 2,236,776 + Psest_2106 0.34 -0.7 2,236,777 - Psest_2106 0.34 +0.7 2,236,777 - Psest_2106 0.34 -1.2 2,236,777 - Psest_2106 0.34 +1.2 2,236,777 - Psest_2106 0.34 -2.2 2,236,831 + Psest_2106 0.40 +1.1 2,236,831 + Psest_2106 0.40 -1.4 2,236,832 - Psest_2106 0.40 -1.9 2,236,832 - Psest_2106 0.40 +0.8 2,236,845 + Psest_2106 0.41 +1.0 2,236,846 - Psest_2106 0.41 +0.7 2,236,861 + Psest_2106 0.43 +0.8 2,236,941 + Psest_2106 0.51 +1.2 2,236,942 - Psest_2106 0.51 +2.8 2,236,942 - Psest_2106 0.51 -0.7 2,237,061 + Psest_2106 0.64 +1.6 2,237,061 + Psest_2106 0.64 +1.5 2,237,061 + Psest_2106 0.64 -1.4 2,237,061 + Psest_2106 0.64 +1.6 2,237,061 + Psest_2106 0.64 -1.9 2,237,061 + Psest_2106 0.64 -0.5 2,237,062 - Psest_2106 0.64 -0.8 2,237,062 - Psest_2106 0.64 -2.0 2,237,062 - Psest_2106 0.64 -2.3 2,237,062 - Psest_2106 0.64 -2.2 2,237,062 - Psest_2106 0.64 +1.3 2,237,062 - Psest_2106 0.64 +0.1 2,237,062 - Psest_2106 0.64 +0.6 2,237,062 - Psest_2106 0.64 +2.2 2,237,062 - Psest_2106 0.64 -0.4 2,237,358 + -1.9 2,237,358 + +0.9 2,237,358 + +3.1 2,237,358 + +2.0 2,237,359 - -1.4 2,237,359 - +0.9 2,237,359 - -0.8 2,237,359 - -0.9 2,237,359 - +0.3 2,237,359 - -2.6 2,237,359 - -2.0 2,237,359 - +0.8 2,237,567 + Psest_2107 0.14 -1.6 2,237,568 - Psest_2107 0.14 -1.7 2,237,569 + Psest_2107 0.14 -2.5 2,237,569 + Psest_2107 0.14 +1.7 2,237,569 + Psest_2107 0.14 -0.8 2,237,569 + Psest_2107 0.14 -1.0 2,237,569 + Psest_2107 0.14 +3.8 2,237,569 + Psest_2107 0.14 +0.9 2,237,569 + Psest_2107 0.14 -0.3 2,237,569 + Psest_2107 0.14 -0.7 2,237,569 + Psest_2107 0.14 -1.0 2,237,569 + Psest_2107 0.14 -3.4 2,237,569 + Psest_2107 0.14 +1.1 2,237,570 - Psest_2107 0.14 -2.4 2,237,570 - Psest_2107 0.14 -2.2 2,237,570 - Psest_2107 0.14 +2.8 2,237,570 - Psest_2107 0.14 -3.2 2,237,570 - Psest_2107 0.14 -1.2 2,237,570 - Psest_2107 0.14 +0.5 2,237,654 + Psest_2107 0.23 -0.4 2,237,655 - Psest_2107 0.23 +0.3 2,237,655 - Psest_2107 0.23 -1.2 2,237,757 + Psest_2107 0.34 -1.2 2,237,757 + Psest_2107 0.34 -0.7 2,237,761 + Psest_2107 0.34 -0.3 2,237,761 + Psest_2107 0.34 +0.1 2,237,762 - Psest_2107 0.34 -1.9 2,237,888 + Psest_2107 0.48 -2.1 2,237,889 - Psest_2107 0.48 -0.3 2,237,963 + Psest_2107 0.56 +0.3 2,237,983 + Psest_2107 0.58 -1.0 2,237,984 - Psest_2107 0.58 +3.2 2,237,984 - Psest_2107 0.58 +1.4 2,238,157 + Psest_2107 0.76 -1.5 2,238,157 + Psest_2107 0.76 +2.7 2,238,157 + Psest_2107 0.76 -2.3 2,238,270 + Psest_2107 0.88 -1.4 2,238,271 - Psest_2107 0.88 -1.8 2,238,271 - Psest_2107 0.88 +0.7 2,238,271 - Psest_2107 0.88 -0.3 2,238,271 - Psest_2107 0.88 -1.8 2,238,280 + Psest_2107 0.89 +2.2 2,238,291 + -1.6 2,238,358 + +1.1 2,238,358 + -0.7 2,238,358 + +0.7 2,238,359 - +2.8 2,238,359 - -1.7
Or see this region's nucleotide sequence