Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2052 and Psest_2053 are separated by 131 nucleotides Psest_2053 and Psest_2054 are separated by 165 nucleotides
Psest_2052: Psest_2052 - PAS domain S-box, at 2,175,909 to 2,177,225
_2052
Psest_2053: Psest_2053 - Uncharacterized low-complexity proteins, at 2,177,357 to 2,178,001
_2053
Psest_2054: Psest_2054 - PQQ-dependent dehydrogenase, methanol/ethanol family, at 2,178,167 to 2,180,038
_2054
Position (kb)
2177
2178
2179 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2176.492 kb on + strand, within Psest_2052 at 2176.493 kb on - strand, within Psest_2052 at 2176.525 kb on + strand, within Psest_2052 at 2176.526 kb on - strand, within Psest_2052 at 2176.526 kb on - strand, within Psest_2052 at 2176.526 kb on - strand, within Psest_2052 at 2176.588 kb on + strand, within Psest_2052 at 2176.588 kb on + strand, within Psest_2052 at 2176.624 kb on + strand, within Psest_2052 at 2176.661 kb on + strand, within Psest_2052 at 2176.661 kb on + strand, within Psest_2052 at 2176.661 kb on + strand, within Psest_2052 at 2176.661 kb on + strand, within Psest_2052 at 2176.662 kb on - strand, within Psest_2052 at 2176.662 kb on - strand, within Psest_2052 at 2176.662 kb on - strand, within Psest_2052 at 2176.662 kb on - strand, within Psest_2052 at 2176.776 kb on + strand, within Psest_2052 at 2176.776 kb on + strand, within Psest_2052 at 2176.991 kb on - strand, within Psest_2052 at 2177.082 kb on + strand, within Psest_2052 at 2177.143 kb on + strand at 2177.143 kb on + strand at 2177.143 kb on + strand at 2177.229 kb on + strand at 2177.230 kb on - strand at 2177.230 kb on - strand at 2177.230 kb on - strand at 2177.279 kb on - strand at 2177.305 kb on + strand at 2177.305 kb on + strand at 2177.347 kb on + strand at 2177.348 kb on - strand at 2177.348 kb on - strand at 2177.421 kb on + strand at 2177.422 kb on - strand, within Psest_2053 at 2177.899 kb on + strand, within Psest_2053 at 2177.914 kb on + strand, within Psest_2053 at 2178.116 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.309 kb on + strand at 2178.310 kb on - strand at 2178.414 kb on + strand, within Psest_2054 at 2178.414 kb on + strand, within Psest_2054 at 2178.414 kb on + strand, within Psest_2054 at 2178.414 kb on + strand, within Psest_2054 at 2178.414 kb on + strand, within Psest_2054 at 2178.461 kb on + strand, within Psest_2054 at 2178.555 kb on + strand, within Psest_2054 at 2178.555 kb on + strand, within Psest_2054 at 2178.556 kb on - strand, within Psest_2054 at 2178.556 kb on - strand, within Psest_2054 at 2178.556 kb on - strand, within Psest_2054 at 2178.607 kb on - strand, within Psest_2054 at 2178.627 kb on + strand, within Psest_2054 at 2178.627 kb on + strand, within Psest_2054 at 2178.628 kb on - strand, within Psest_2054 at 2178.657 kb on + strand, within Psest_2054 at 2178.657 kb on + strand, within Psest_2054 at 2178.658 kb on - strand, within Psest_2054 at 2178.681 kb on + strand, within Psest_2054 at 2178.791 kb on + strand, within Psest_2054 at 2178.891 kb on + strand, within Psest_2054 at 2178.891 kb on + strand, within Psest_2054 at 2178.891 kb on + strand, within Psest_2054 at 2178.891 kb on + strand, within Psest_2054 at 2178.891 kb on + strand, within Psest_2054 at 2178.954 kb on + strand, within Psest_2054
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,176,492 + Psest_2052 0.44 -0.1 2,176,493 - Psest_2052 0.44 -1.4 2,176,525 + Psest_2052 0.47 +0.2 2,176,526 - Psest_2052 0.47 -3.1 2,176,526 - Psest_2052 0.47 -0.4 2,176,526 - Psest_2052 0.47 -0.4 2,176,588 + Psest_2052 0.52 -1.6 2,176,588 + Psest_2052 0.52 -0.2 2,176,624 + Psest_2052 0.54 +0.4 2,176,661 + Psest_2052 0.57 +0.6 2,176,661 + Psest_2052 0.57 -0.8 2,176,661 + Psest_2052 0.57 -1.1 2,176,661 + Psest_2052 0.57 +1.0 2,176,662 - Psest_2052 0.57 -1.6 2,176,662 - Psest_2052 0.57 -1.3 2,176,662 - Psest_2052 0.57 -1.8 2,176,662 - Psest_2052 0.57 -1.7 2,176,776 + Psest_2052 0.66 -0.6 2,176,776 + Psest_2052 0.66 +0.8 2,176,991 - Psest_2052 0.82 +2.3 2,177,082 + Psest_2052 0.89 +1.8 2,177,143 + -1.8 2,177,143 + -2.5 2,177,143 + -1.3 2,177,229 + +1.0 2,177,230 - +0.2 2,177,230 - +0.1 2,177,230 - -0.4 2,177,279 - -1.2 2,177,305 + -0.0 2,177,305 + -0.7 2,177,347 + -1.8 2,177,348 - -0.7 2,177,348 - +2.6 2,177,421 + -0.1 2,177,422 - Psest_2053 0.10 -0.9 2,177,899 + Psest_2053 0.84 -1.8 2,177,914 + Psest_2053 0.86 -1.3 2,178,116 + -1.9 2,178,309 + +0.5 2,178,309 + -2.5 2,178,309 + -2.3 2,178,309 + +0.6 2,178,309 + -0.9 2,178,309 + -0.2 2,178,309 + -0.4 2,178,309 + -0.6 2,178,309 + -1.5 2,178,310 - -0.0 2,178,414 + Psest_2054 0.13 +0.2 2,178,414 + Psest_2054 0.13 +0.5 2,178,414 + Psest_2054 0.13 -2.3 2,178,414 + Psest_2054 0.13 +2.6 2,178,414 + Psest_2054 0.13 -0.1 2,178,461 + Psest_2054 0.16 +0.1 2,178,555 + Psest_2054 0.21 -2.7 2,178,555 + Psest_2054 0.21 -0.7 2,178,556 - Psest_2054 0.21 -0.1 2,178,556 - Psest_2054 0.21 -2.1 2,178,556 - Psest_2054 0.21 -0.8 2,178,607 - Psest_2054 0.24 -1.3 2,178,627 + Psest_2054 0.25 -1.6 2,178,627 + Psest_2054 0.25 -0.2 2,178,628 - Psest_2054 0.25 +1.1 2,178,657 + Psest_2054 0.26 -2.0 2,178,657 + Psest_2054 0.26 +0.2 2,178,658 - Psest_2054 0.26 -0.6 2,178,681 + Psest_2054 0.27 -0.4 2,178,791 + Psest_2054 0.33 +2.1 2,178,891 + Psest_2054 0.39 +0.8 2,178,891 + Psest_2054 0.39 +1.0 2,178,891 + Psest_2054 0.39 -1.8 2,178,891 + Psest_2054 0.39 -2.0 2,178,891 + Psest_2054 0.39 +2.3 2,178,954 + Psest_2054 0.42 -0.8
Or see this region's nucleotide sequence