Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1966 and Psest_1967 are separated by 168 nucleotides Psest_1967 and Psest_1968 are separated by 230 nucleotides Psest_1968 and Psest_1969 overlap by 1 nucleotides Psest_1969 and Psest_1971 are separated by 284 nucleotides
Psest_1966: Psest_1966 - Glycine/D-amino acid oxidases (deaminating), at 2,079,899 to 2,081,182
_1966
Psest_1967: Psest_1967 - tRNA_Val_GAC, at 2,081,351 to 2,081,427
_1967
Psest_1968: Psest_1968 - threonyl-tRNA synthetase, at 2,081,658 to 2,083,580
_1968
Psest_1969: Psest_1969 - translation initiation factor IF-3, at 2,083,580 to 2,084,131
_1969
Psest_1971: Psest_1971 - ribosomal protein L20, at 2,084,416 to 2,084,772
_1971
Position (kb)
2081
2082
2083
2084 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2080.697 kb on + strand, within Psest_1966 at 2080.705 kb on + strand, within Psest_1966 at 2080.706 kb on - strand, within Psest_1966 at 2080.802 kb on + strand, within Psest_1966 at 2080.802 kb on + strand, within Psest_1966 at 2080.803 kb on - strand, within Psest_1966 at 2080.831 kb on + strand, within Psest_1966 at 2080.836 kb on + strand, within Psest_1966 at 2080.837 kb on - strand, within Psest_1966 at 2080.945 kb on + strand, within Psest_1966 at 2080.947 kb on + strand, within Psest_1966 at 2080.947 kb on + strand, within Psest_1966 at 2080.947 kb on + strand, within Psest_1966 at 2080.948 kb on - strand, within Psest_1966 at 2080.948 kb on - strand, within Psest_1966 at 2080.948 kb on - strand, within Psest_1966 at 2080.948 kb on - strand, within Psest_1966 at 2080.951 kb on + strand, within Psest_1966 at 2080.951 kb on + strand, within Psest_1966 at 2080.951 kb on + strand, within Psest_1966 at 2080.951 kb on + strand, within Psest_1966 at 2080.952 kb on - strand, within Psest_1966 at 2081.067 kb on + strand at 2081.151 kb on + strand at 2081.151 kb on + strand at 2081.154 kb on + strand at 2081.154 kb on + strand at 2081.154 kb on + strand at 2081.154 kb on + strand at 2081.155 kb on - strand at 2081.155 kb on - strand at 2081.155 kb on - strand at 2081.155 kb on - strand at 2081.155 kb on - strand at 2081.182 kb on + strand at 2081.183 kb on - strand at 2081.189 kb on + strand at 2081.261 kb on - strand at 2081.261 kb on - strand at 2081.261 kb on - strand at 2081.264 kb on + strand at 2081.264 kb on + strand at 2081.283 kb on + strand at 2081.295 kb on - strand at 2081.629 kb on + strand at 2081.642 kb on + strand at 2084.166 kb on + strand at 2084.166 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 2,080,697 + Psest_1966 0.62 -0.7 2,080,705 + Psest_1966 0.63 -1.6 2,080,706 - Psest_1966 0.63 -0.1 2,080,802 + Psest_1966 0.70 -0.6 2,080,802 + Psest_1966 0.70 +0.0 2,080,803 - Psest_1966 0.70 -1.6 2,080,831 + Psest_1966 0.73 -1.4 2,080,836 + Psest_1966 0.73 -0.8 2,080,837 - Psest_1966 0.73 +0.2 2,080,945 + Psest_1966 0.81 +0.6 2,080,947 + Psest_1966 0.82 +0.4 2,080,947 + Psest_1966 0.82 -1.4 2,080,947 + Psest_1966 0.82 +0.0 2,080,948 - Psest_1966 0.82 +1.3 2,080,948 - Psest_1966 0.82 -1.1 2,080,948 - Psest_1966 0.82 +2.3 2,080,948 - Psest_1966 0.82 +0.6 2,080,951 + Psest_1966 0.82 +1.1 2,080,951 + Psest_1966 0.82 -2.7 2,080,951 + Psest_1966 0.82 -0.3 2,080,951 + Psest_1966 0.82 -0.9 2,080,952 - Psest_1966 0.82 -0.3 2,081,067 + +2.0 2,081,151 + -1.4 2,081,151 + -1.6 2,081,154 + -2.6 2,081,154 + -1.8 2,081,154 + -3.9 2,081,154 + +1.2 2,081,155 - -0.2 2,081,155 - +0.3 2,081,155 - -0.1 2,081,155 - -0.3 2,081,155 - -1.7 2,081,182 + -1.7 2,081,183 - -0.2 2,081,189 + +0.8 2,081,261 - -0.8 2,081,261 - -0.2 2,081,261 - -1.1 2,081,264 + +0.6 2,081,264 + -0.7 2,081,283 + -0.9 2,081,295 - +1.5 2,081,629 + +1.3 2,081,642 + +2.6 2,084,166 + +2.4 2,084,166 + -0.3
Or see this region's nucleotide sequence