Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1825 and Psest_1826 are separated by 213 nucleotides Psest_1826 and Psest_1827 are separated by 283 nucleotides Psest_1827 and Psest_1828 are separated by 285 nucleotides
Psest_1825: Psest_1825 - Predicted nucleoside-diphosphate sugar epimerases, at 1,923,758 to 1,925,773
_1825
Psest_1826: Psest_1826 - hypothetical protein, at 1,925,987 to 1,926,394
_1826
Psest_1827: Psest_1827 - Phosphopantetheinyl transferase component of siderophore synthetase, at 1,926,678 to 1,927,415
_1827
Psest_1828: Psest_1828 - polyphosphate:AMP phosphotransferase, at 1,927,701 to 1,929,200
_1828
Position (kb)
1926
1927
1928 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1925.745 kb on - strand at 1925.772 kb on - strand at 1925.774 kb on + strand at 1925.774 kb on + strand at 1925.774 kb on + strand at 1925.774 kb on + strand at 1925.774 kb on + strand at 1925.775 kb on - strand at 1925.775 kb on - strand at 1925.775 kb on - strand at 1925.775 kb on - strand at 1925.775 kb on - strand at 1925.778 kb on + strand at 1925.778 kb on + strand at 1925.778 kb on + strand at 1925.778 kb on + strand at 1925.779 kb on - strand at 1925.784 kb on + strand at 1925.785 kb on - strand at 1925.785 kb on - strand at 1925.884 kb on + strand at 1925.953 kb on + strand at 1925.953 kb on + strand at 1925.953 kb on + strand at 1925.954 kb on - strand at 1926.155 kb on + strand, within Psest_1826 at 1926.155 kb on + strand, within Psest_1826 at 1926.156 kb on - strand, within Psest_1826 at 1926.156 kb on - strand, within Psest_1826 at 1926.156 kb on - strand, within Psest_1826 at 1926.156 kb on - strand, within Psest_1826 at 1926.430 kb on - strand at 1926.430 kb on - strand at 1926.432 kb on - strand at 1926.432 kb on - strand at 1926.432 kb on - strand at 1926.552 kb on + strand at 1926.552 kb on + strand at 1926.553 kb on - strand at 1926.614 kb on + strand at 1926.615 kb on - strand at 1926.615 kb on - strand at 1926.615 kb on - strand at 1926.646 kb on + strand at 1926.646 kb on + strand at 1926.679 kb on + strand at 1926.680 kb on - strand at 1927.464 kb on + strand at 1927.464 kb on + strand at 1927.465 kb on - strand at 1927.520 kb on - strand at 1927.561 kb on - strand at 1927.561 kb on - strand at 1927.627 kb on + strand at 1927.627 kb on + strand at 1927.627 kb on + strand at 1927.627 kb on + strand at 1927.746 kb on + strand at 1927.746 kb on + strand at 1927.746 kb on + strand at 1927.747 kb on - strand at 1927.747 kb on - strand at 1927.831 kb on + strand at 1928.025 kb on + strand, within Psest_1828 at 1928.216 kb on + strand, within Psest_1828 at 1928.216 kb on + strand, within Psest_1828 at 1928.217 kb on - strand, within Psest_1828 at 1928.217 kb on - strand, within Psest_1828 at 1928.260 kb on - strand, within Psest_1828 at 1928.325 kb on + strand, within Psest_1828 at 1928.325 kb on + strand, within Psest_1828 at 1928.325 kb on + strand, within Psest_1828 at 1928.325 kb on + strand, within Psest_1828 at 1928.326 kb on - strand, within Psest_1828 at 1928.326 kb on - strand, within Psest_1828 at 1928.326 kb on - strand, within Psest_1828 at 1928.329 kb on + strand, within Psest_1828 at 1928.329 kb on + strand, within Psest_1828 at 1928.329 kb on + strand, within Psest_1828 at 1928.329 kb on + strand, within Psest_1828 at 1928.330 kb on - strand, within Psest_1828
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 1,925,745 - -2.0 1,925,772 - +0.5 1,925,774 + -0.2 1,925,774 + +2.9 1,925,774 + +0.8 1,925,774 + -1.0 1,925,774 + +1.6 1,925,775 - -2.9 1,925,775 - +1.6 1,925,775 - -0.9 1,925,775 - -1.1 1,925,775 - -3.6 1,925,778 + -3.0 1,925,778 + -0.4 1,925,778 + -2.7 1,925,778 + -2.8 1,925,779 - -2.0 1,925,784 + +0.4 1,925,785 - -0.2 1,925,785 - -1.3 1,925,884 + -1.3 1,925,953 + -1.0 1,925,953 + -1.3 1,925,953 + -2.5 1,925,954 - -0.6 1,926,155 + Psest_1826 0.41 -2.1 1,926,155 + Psest_1826 0.41 +0.8 1,926,156 - Psest_1826 0.41 +0.2 1,926,156 - Psest_1826 0.41 +1.6 1,926,156 - Psest_1826 0.41 +0.7 1,926,156 - Psest_1826 0.41 -0.8 1,926,430 - -0.6 1,926,430 - +0.3 1,926,432 - +0.9 1,926,432 - +0.1 1,926,432 - +0.8 1,926,552 + -0.4 1,926,552 + +0.6 1,926,553 - -0.3 1,926,614 + +1.3 1,926,615 - -2.1 1,926,615 - -0.9 1,926,615 - +0.6 1,926,646 + -2.3 1,926,646 + -1.8 1,926,679 + +0.6 1,926,680 - -0.9 1,927,464 + +0.8 1,927,464 + -0.1 1,927,465 - -1.9 1,927,520 - +0.3 1,927,561 - -1.6 1,927,561 - +0.4 1,927,627 + +0.3 1,927,627 + -2.3 1,927,627 + -1.7 1,927,627 + +0.1 1,927,746 + -1.6 1,927,746 + -0.9 1,927,746 + -0.9 1,927,747 - +0.0 1,927,747 - -2.1 1,927,831 + -1.4 1,928,025 + Psest_1828 0.22 +0.1 1,928,216 + Psest_1828 0.34 -2.6 1,928,216 + Psest_1828 0.34 -2.4 1,928,217 - Psest_1828 0.34 +0.3 1,928,217 - Psest_1828 0.34 -2.6 1,928,260 - Psest_1828 0.37 -3.0 1,928,325 + Psest_1828 0.42 -0.4 1,928,325 + Psest_1828 0.42 +0.2 1,928,325 + Psest_1828 0.42 -0.8 1,928,325 + Psest_1828 0.42 -0.3 1,928,326 - Psest_1828 0.42 +0.2 1,928,326 - Psest_1828 0.42 -0.3 1,928,326 - Psest_1828 0.42 -0.4 1,928,329 + Psest_1828 0.42 -2.3 1,928,329 + Psest_1828 0.42 +1.0 1,928,329 + Psest_1828 0.42 -2.4 1,928,329 + Psest_1828 0.42 -0.9 1,928,330 - Psest_1828 0.42 -2.3
Or see this region's nucleotide sequence