Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1476 and Psest_1477 overlap by 4 nucleotides Psest_1477 and Psest_1478 are separated by 50 nucleotides Psest_1478 and Psest_1479 overlap by 8 nucleotides
Psest_1476: Psest_1476 - Predicted permease, at 1,581,244 to 1,582,341
_1476
Psest_1477: Psest_1477 - DnaA regulatory inactivator Hda, at 1,582,338 to 1,583,042
_1477
Psest_1478: Psest_1478 - Predicted membrane protein, at 1,583,093 to 1,583,503
_1478
Psest_1479: Psest_1479 - NAD(P)H:quinone oxidoreductase, type IV, at 1,583,496 to 1,584,101
_1479
Position (kb)
1582
1583
1584 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1581.361 kb on + strand, within Psest_1476 at 1581.362 kb on - strand, within Psest_1476 at 1581.512 kb on - strand, within Psest_1476 at 1581.645 kb on + strand, within Psest_1476 at 1581.646 kb on - strand, within Psest_1476 at 1581.665 kb on + strand, within Psest_1476 at 1581.681 kb on + strand, within Psest_1476 at 1581.682 kb on - strand, within Psest_1476 at 1581.748 kb on + strand, within Psest_1476 at 1581.748 kb on + strand, within Psest_1476 at 1581.748 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.907 kb on + strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.908 kb on - strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.921 kb on + strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.922 kb on - strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.988 kb on + strand, within Psest_1476 at 1581.989 kb on - strand, within Psest_1476 at 1582.082 kb on + strand, within Psest_1476 at 1582.082 kb on + strand, within Psest_1476 at 1582.083 kb on - strand, within Psest_1476 at 1582.083 kb on - strand, within Psest_1476 at 1582.083 kb on - strand, within Psest_1476 at 1582.086 kb on + strand, within Psest_1476 at 1582.276 kb on + strand at 1582.277 kb on - strand at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.197 kb on - strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.257 kb on + strand, within Psest_1478 at 1583.378 kb on + strand, within Psest_1478 at 1583.488 kb on + strand at 1583.489 kb on - strand at 1583.667 kb on - strand, within Psest_1479 at 1583.667 kb on - strand, within Psest_1479 at 1583.669 kb on - strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.921 kb on - strand, within Psest_1479
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 1,581,361 + Psest_1476 0.11 -1.9 1,581,362 - Psest_1476 0.11 +2.0 1,581,512 - Psest_1476 0.24 -1.7 1,581,645 + Psest_1476 0.37 -0.9 1,581,646 - Psest_1476 0.37 +0.9 1,581,665 + Psest_1476 0.38 -2.2 1,581,681 + Psest_1476 0.40 -3.3 1,581,682 - Psest_1476 0.40 +1.0 1,581,748 + Psest_1476 0.46 -1.3 1,581,748 + Psest_1476 0.46 -1.0 1,581,748 + Psest_1476 0.46 -2.3 1,581,907 + Psest_1476 0.60 +0.1 1,581,907 + Psest_1476 0.60 -0.2 1,581,907 + Psest_1476 0.60 -1.4 1,581,907 + Psest_1476 0.60 +2.2 1,581,907 + Psest_1476 0.60 -4.1 1,581,907 + Psest_1476 0.60 -0.4 1,581,907 + Psest_1476 0.60 -0.2 1,581,907 + Psest_1476 0.60 +0.4 1,581,907 + Psest_1476 0.60 -1.4 1,581,907 + Psest_1476 0.60 -0.4 1,581,907 + Psest_1476 0.60 -0.7 1,581,907 + Psest_1476 0.60 -1.5 1,581,907 + Psest_1476 0.60 -0.2 1,581,907 + Psest_1476 0.60 +0.1 1,581,908 - Psest_1476 0.60 -0.5 1,581,908 - Psest_1476 0.60 +2.6 1,581,908 - Psest_1476 0.60 +0.1 1,581,908 - Psest_1476 0.60 -2.5 1,581,921 + Psest_1476 0.62 -1.6 1,581,921 + Psest_1476 0.62 +2.0 1,581,921 + Psest_1476 0.62 -0.1 1,581,921 + Psest_1476 0.62 -1.9 1,581,922 - Psest_1476 0.62 +0.4 1,581,922 - Psest_1476 0.62 -1.2 1,581,922 - Psest_1476 0.62 -1.0 1,581,922 - Psest_1476 0.62 -1.7 1,581,988 + Psest_1476 0.68 +0.5 1,581,988 + Psest_1476 0.68 +0.5 1,581,988 + Psest_1476 0.68 +0.8 1,581,988 + Psest_1476 0.68 -0.6 1,581,988 + Psest_1476 0.68 -1.3 1,581,989 - Psest_1476 0.68 -0.2 1,582,082 + Psest_1476 0.76 +1.2 1,582,082 + Psest_1476 0.76 -0.2 1,582,083 - Psest_1476 0.76 -1.3 1,582,083 - Psest_1476 0.76 -2.0 1,582,083 - Psest_1476 0.76 -1.7 1,582,086 + Psest_1476 0.77 -1.3 1,582,276 + -0.2 1,582,277 - -1.4 1,583,142 + Psest_1478 0.12 +0.4 1,583,142 + Psest_1478 0.12 +0.3 1,583,142 + Psest_1478 0.12 -1.2 1,583,142 + Psest_1478 0.12 +0.6 1,583,142 + Psest_1478 0.12 -0.2 1,583,142 + Psest_1478 0.12 -3.1 1,583,143 - Psest_1478 0.12 +1.3 1,583,143 - Psest_1478 0.12 +0.2 1,583,143 - Psest_1478 0.12 +0.1 1,583,143 - Psest_1478 0.12 -1.5 1,583,143 - Psest_1478 0.12 -0.9 1,583,143 - Psest_1478 0.12 -0.7 1,583,143 - Psest_1478 0.12 -1.7 1,583,143 - Psest_1478 0.12 +0.1 1,583,143 - Psest_1478 0.12 -3.0 1,583,196 + Psest_1478 0.25 -2.0 1,583,196 + Psest_1478 0.25 -1.7 1,583,196 + Psest_1478 0.25 -2.5 1,583,196 + Psest_1478 0.25 -2.2 1,583,197 - Psest_1478 0.25 -2.6 1,583,244 + Psest_1478 0.37 -2.9 1,583,244 + Psest_1478 0.37 -1.7 1,583,244 + Psest_1478 0.37 -1.4 1,583,244 + Psest_1478 0.37 -3.1 1,583,257 + Psest_1478 0.40 -3.2 1,583,378 + Psest_1478 0.69 -1.9 1,583,488 + -1.1 1,583,489 - -2.0 1,583,667 - Psest_1479 0.28 +0.3 1,583,667 - Psest_1479 0.28 -1.0 1,583,669 - Psest_1479 0.29 -2.2 1,583,833 + Psest_1479 0.56 -2.4 1,583,833 + Psest_1479 0.56 -1.7 1,583,833 + Psest_1479 0.56 -0.7 1,583,834 - Psest_1479 0.56 +1.4 1,583,834 - Psest_1479 0.56 +0.1 1,583,834 - Psest_1479 0.56 +1.7 1,583,921 - Psest_1479 0.70 +0.3
Or see this region's nucleotide sequence