Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1406 and Psest_1407 overlap by 17 nucleotides Psest_1407 and Psest_1408 are separated by 434 nucleotides
Psest_1406: Psest_1406 - His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 1,512,440 to 1,514,143
_1406
Psest_1407: Psest_1407 - RecA-superfamily ATPases implicated in signal transduction, at 1,514,127 to 1,515,653
_1407
Psest_1408: Psest_1408 - Predicted unusual protein kinase, at 1,516,088 to 1,517,395
_1408
Position (kb)
1514
1515
1516 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1513.729 kb on - strand, within Psest_1406 at 1513.787 kb on + strand, within Psest_1406 at 1514.006 kb on + strand at 1514.006 kb on + strand at 1514.006 kb on + strand at 1514.006 kb on + strand at 1514.006 kb on + strand at 1514.006 kb on + strand at 1514.006 kb on + strand at 1514.007 kb on - strand at 1514.007 kb on - strand at 1514.108 kb on + strand at 1514.108 kb on + strand at 1514.109 kb on - strand at 1514.179 kb on + strand at 1514.197 kb on - strand at 1514.197 kb on - strand at 1514.247 kb on - strand at 1514.342 kb on - strand, within Psest_1407 at 1514.371 kb on + strand, within Psest_1407 at 1514.371 kb on + strand, within Psest_1407 at 1514.372 kb on - strand, within Psest_1407 at 1514.372 kb on - strand, within Psest_1407 at 1514.372 kb on - strand, within Psest_1407 at 1514.372 kb on - strand, within Psest_1407 at 1514.372 kb on - strand, within Psest_1407 at 1514.372 kb on - strand, within Psest_1407 at 1514.424 kb on + strand, within Psest_1407 at 1514.425 kb on - strand, within Psest_1407 at 1514.425 kb on - strand, within Psest_1407 at 1514.458 kb on + strand, within Psest_1407 at 1514.458 kb on + strand, within Psest_1407 at 1514.458 kb on + strand, within Psest_1407 at 1514.459 kb on - strand, within Psest_1407 at 1514.459 kb on - strand, within Psest_1407 at 1514.519 kb on - strand, within Psest_1407 at 1514.560 kb on - strand, within Psest_1407 at 1514.565 kb on + strand, within Psest_1407 at 1514.764 kb on + strand, within Psest_1407 at 1514.930 kb on - strand, within Psest_1407 at 1514.968 kb on + strand, within Psest_1407 at 1515.031 kb on + strand, within Psest_1407 at 1515.032 kb on - strand, within Psest_1407 at 1515.369 kb on + strand, within Psest_1407 at 1515.369 kb on + strand, within Psest_1407 at 1515.369 kb on + strand, within Psest_1407 at 1515.370 kb on - strand, within Psest_1407 at 1515.370 kb on - strand, within Psest_1407 at 1515.370 kb on - strand, within Psest_1407 at 1515.370 kb on - strand, within Psest_1407 at 1515.448 kb on + strand, within Psest_1407 at 1515.448 kb on + strand, within Psest_1407 at 1515.448 kb on + strand, within Psest_1407 at 1515.448 kb on + strand, within Psest_1407 at 1515.449 kb on - strand, within Psest_1407 at 1515.525 kb on - strand at 1515.538 kb on + strand at 1515.538 kb on + strand at 1515.538 kb on + strand at 1515.538 kb on + strand at 1515.538 kb on + strand at 1515.538 kb on + strand at 1515.538 kb on + strand at 1515.538 kb on + strand at 1515.539 kb on - strand at 1515.539 kb on - strand at 1515.539 kb on - strand at 1515.539 kb on - strand at 1515.858 kb on - strand at 1515.858 kb on - strand at 1515.858 kb on - strand at 1515.858 kb on - strand at 1515.988 kb on + strand at 1515.988 kb on + strand at 1515.988 kb on + strand at 1515.988 kb on + strand at 1515.989 kb on - strand at 1515.989 kb on - strand at 1516.403 kb on + strand, within Psest_1408 at 1516.418 kb on + strand, within Psest_1408 at 1516.631 kb on + strand, within Psest_1408 at 1516.631 kb on + strand, within Psest_1408 at 1516.631 kb on + strand, within Psest_1408 at 1516.631 kb on + strand, within Psest_1408 at 1516.631 kb on + strand, within Psest_1408 at 1516.631 kb on + strand, within Psest_1408 at 1516.632 kb on - strand, within Psest_1408 at 1516.632 kb on - strand, within Psest_1408 at 1516.632 kb on - strand, within Psest_1408 at 1516.632 kb on - strand, within Psest_1408
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 1,513,729 - Psest_1406 0.76 -0.2 1,513,787 + Psest_1406 0.79 +0.5 1,514,006 + -0.3 1,514,006 + -2.0 1,514,006 + +0.9 1,514,006 + +0.2 1,514,006 + -1.8 1,514,006 + -0.2 1,514,006 + +1.5 1,514,007 - -2.3 1,514,007 - +0.7 1,514,108 + +0.1 1,514,108 + +0.4 1,514,109 - +1.4 1,514,179 + -1.7 1,514,197 - +1.9 1,514,197 - -0.8 1,514,247 - +0.5 1,514,342 - Psest_1407 0.14 +1.5 1,514,371 + Psest_1407 0.16 +1.1 1,514,371 + Psest_1407 0.16 +0.8 1,514,372 - Psest_1407 0.16 +0.7 1,514,372 - Psest_1407 0.16 +0.1 1,514,372 - Psest_1407 0.16 -0.6 1,514,372 - Psest_1407 0.16 +2.0 1,514,372 - Psest_1407 0.16 +3.7 1,514,372 - Psest_1407 0.16 +0.6 1,514,424 + Psest_1407 0.19 -0.1 1,514,425 - Psest_1407 0.20 +0.1 1,514,425 - Psest_1407 0.20 +2.4 1,514,458 + Psest_1407 0.22 -1.4 1,514,458 + Psest_1407 0.22 +0.7 1,514,458 + Psest_1407 0.22 +0.2 1,514,459 - Psest_1407 0.22 +0.5 1,514,459 - Psest_1407 0.22 +1.2 1,514,519 - Psest_1407 0.26 +1.3 1,514,560 - Psest_1407 0.28 -0.3 1,514,565 + Psest_1407 0.29 +0.2 1,514,764 + Psest_1407 0.42 +0.2 1,514,930 - Psest_1407 0.53 +1.9 1,514,968 + Psest_1407 0.55 -0.8 1,515,031 + Psest_1407 0.59 -1.2 1,515,032 - Psest_1407 0.59 -1.4 1,515,369 + Psest_1407 0.81 -0.9 1,515,369 + Psest_1407 0.81 +0.3 1,515,369 + Psest_1407 0.81 -2.4 1,515,370 - Psest_1407 0.81 +0.7 1,515,370 - Psest_1407 0.81 -0.3 1,515,370 - Psest_1407 0.81 +1.2 1,515,370 - Psest_1407 0.81 -0.7 1,515,448 + Psest_1407 0.87 +1.6 1,515,448 + Psest_1407 0.87 +0.3 1,515,448 + Psest_1407 0.87 +1.9 1,515,448 + Psest_1407 0.87 +1.3 1,515,449 - Psest_1407 0.87 -0.1 1,515,525 - +2.8 1,515,538 + -0.2 1,515,538 + +0.8 1,515,538 + +0.9 1,515,538 + -0.8 1,515,538 + -0.5 1,515,538 + +2.5 1,515,538 + +3.1 1,515,538 + -0.5 1,515,539 - +0.6 1,515,539 - -1.1 1,515,539 - +1.5 1,515,539 - +3.0 1,515,858 - +0.5 1,515,858 - +0.1 1,515,858 - +0.5 1,515,858 - +0.5 1,515,988 + -0.5 1,515,988 + -1.3 1,515,988 + +0.9 1,515,988 + +0.9 1,515,989 - +1.3 1,515,989 - -0.1 1,516,403 + Psest_1408 0.24 +0.9 1,516,418 + Psest_1408 0.25 -0.3 1,516,631 + Psest_1408 0.42 -0.1 1,516,631 + Psest_1408 0.42 -0.7 1,516,631 + Psest_1408 0.42 +1.1 1,516,631 + Psest_1408 0.42 +2.5 1,516,631 + Psest_1408 0.42 +2.5 1,516,631 + Psest_1408 0.42 -0.1 1,516,632 - Psest_1408 0.42 +2.6 1,516,632 - Psest_1408 0.42 +0.1 1,516,632 - Psest_1408 0.42 -1.2 1,516,632 - Psest_1408 0.42 -0.1
Or see this region's nucleotide sequence