Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1237 and Psest_1238 are separated by 68 nucleotides Psest_1238 and Psest_1239 are separated by 97 nucleotides Psest_1239 and Psest_1240 are separated by 496 nucleotides
Psest_1237: Psest_1237 - Predicted permeases, at 1,346,403 to 1,347,464
_1237
Psest_1238: Psest_1238 - Predicted membrane protein/domain, at 1,347,533 to 1,348,030
_1238
Psest_1239: Psest_1239 - Cold shock proteins, at 1,348,128 to 1,348,340
_1239
Psest_1240: Psest_1240 - tRNA_Leu_CAA, at 1,348,837 to 1,348,923
_1240
Position (kb)
1347
1348
1349 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1347.481 kb on + strand at 1347.481 kb on + strand at 1347.481 kb on + strand at 1347.481 kb on + strand at 1347.481 kb on + strand at 1347.481 kb on + strand at 1347.481 kb on + strand at 1347.482 kb on - strand at 1347.535 kb on - strand at 1347.631 kb on - strand, within Psest_1238 at 1347.692 kb on + strand, within Psest_1238 at 1347.879 kb on + strand, within Psest_1238 at 1347.879 kb on + strand, within Psest_1238 at 1347.879 kb on + strand, within Psest_1238 at 1347.880 kb on - strand, within Psest_1238 at 1347.880 kb on - strand, within Psest_1238 at 1347.880 kb on - strand, within Psest_1238 at 1347.880 kb on - strand, within Psest_1238 at 1347.880 kb on - strand, within Psest_1238 at 1347.893 kb on + strand, within Psest_1238 at 1347.893 kb on + strand, within Psest_1238 at 1347.894 kb on - strand, within Psest_1238 at 1347.954 kb on + strand, within Psest_1238 at 1347.954 kb on + strand, within Psest_1238 at 1347.954 kb on + strand, within Psest_1238 at 1347.954 kb on + strand, within Psest_1238 at 1347.955 kb on - strand, within Psest_1238 at 1347.955 kb on - strand, within Psest_1238 at 1347.955 kb on - strand, within Psest_1238 at 1347.955 kb on - strand, within Psest_1238 at 1348.046 kb on - strand at 1348.046 kb on - strand at 1348.065 kb on + strand at 1348.348 kb on + strand at 1348.349 kb on - strand at 1348.349 kb on - strand at 1348.367 kb on + strand at 1348.367 kb on + strand at 1348.367 kb on + strand at 1348.368 kb on - strand at 1348.383 kb on + strand at 1348.414 kb on - strand at 1348.448 kb on + strand at 1348.449 kb on - strand at 1348.449 kb on - strand at 1348.449 kb on - strand at 1348.449 kb on - strand at 1348.449 kb on - strand at 1348.449 kb on - strand at 1348.449 kb on - strand at 1348.503 kb on + strand at 1348.503 kb on + strand at 1348.503 kb on + strand at 1348.503 kb on + strand at 1348.694 kb on - strand at 1348.694 kb on - strand at 1348.814 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 1,347,481 + -2.1 1,347,481 + -2.7 1,347,481 + -0.5 1,347,481 + -0.4 1,347,481 + -2.0 1,347,481 + -0.7 1,347,481 + -0.3 1,347,482 - -1.2 1,347,535 - -1.1 1,347,631 - Psest_1238 0.20 -3.1 1,347,692 + Psest_1238 0.32 -2.1 1,347,879 + Psest_1238 0.69 -0.4 1,347,879 + Psest_1238 0.69 -3.3 1,347,879 + Psest_1238 0.69 -1.1 1,347,880 - Psest_1238 0.70 +0.5 1,347,880 - Psest_1238 0.70 -2.4 1,347,880 - Psest_1238 0.70 -1.9 1,347,880 - Psest_1238 0.70 -2.3 1,347,880 - Psest_1238 0.70 -1.5 1,347,893 + Psest_1238 0.72 +1.5 1,347,893 + Psest_1238 0.72 -2.0 1,347,894 - Psest_1238 0.72 -3.4 1,347,954 + Psest_1238 0.85 -1.4 1,347,954 + Psest_1238 0.85 -1.7 1,347,954 + Psest_1238 0.85 -0.4 1,347,954 + Psest_1238 0.85 -2.7 1,347,955 - Psest_1238 0.85 -0.6 1,347,955 - Psest_1238 0.85 -3.1 1,347,955 - Psest_1238 0.85 -2.3 1,347,955 - Psest_1238 0.85 -2.6 1,348,046 - -0.7 1,348,046 - -2.7 1,348,065 + -0.5 1,348,348 + -3.4 1,348,349 - -2.2 1,348,349 - -0.7 1,348,367 + -2.0 1,348,367 + -0.5 1,348,367 + -0.5 1,348,368 - +1.5 1,348,383 + -2.8 1,348,414 - -1.2 1,348,448 + -1.7 1,348,449 - +2.5 1,348,449 - -0.4 1,348,449 - -1.9 1,348,449 - -1.1 1,348,449 - -2.2 1,348,449 - -3.1 1,348,449 - +0.5 1,348,503 + -1.3 1,348,503 + -1.4 1,348,503 + -1.2 1,348,503 + +0.6 1,348,694 - -0.5 1,348,694 - +0.9 1,348,814 - -1.8
Or see this region's nucleotide sequence