Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1132 and Psest_1133 are separated by 172 nucleotides Psest_1133 and Psest_1134 are separated by 119 nucleotides
Psest_1132: Psest_1132 - mutator mutT protein, at 1,228,882 to 1,229,820
_1132
Psest_1133: Psest_1133 - peroxiredoxin, at 1,229,993 to 1,230,556
_1133
Psest_1134: Psest_1134 - alkyl hydroperoxide reductase, F subunit, at 1,230,676 to 1,232,238
_1134
Position (kb)
1229
1230
1231 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1229.218 kb on + strand, within Psest_1132 at 1229.218 kb on + strand, within Psest_1132 at 1229.218 kb on + strand, within Psest_1132 at 1229.219 kb on - strand, within Psest_1132 at 1229.392 kb on + strand, within Psest_1132 at 1229.393 kb on - strand, within Psest_1132 at 1229.393 kb on - strand, within Psest_1132 at 1229.615 kb on + strand, within Psest_1132 at 1229.705 kb on + strand, within Psest_1132 at 1229.726 kb on - strand, within Psest_1132 at 1229.836 kb on + strand at 1229.836 kb on + strand at 1229.836 kb on + strand at 1229.836 kb on + strand at 1229.837 kb on - strand at 1229.837 kb on - strand at 1229.837 kb on - strand at 1229.837 kb on - strand at 1229.861 kb on + strand at 1229.861 kb on + strand at 1229.875 kb on + strand at 1229.945 kb on + strand at 1229.945 kb on + strand at 1229.950 kb on + strand at 1230.554 kb on + strand at 1230.554 kb on + strand at 1230.554 kb on + strand at 1230.554 kb on + strand at 1230.555 kb on - strand at 1230.643 kb on - strand at 1231.195 kb on + strand, within Psest_1134 at 1231.360 kb on + strand, within Psest_1134 at 1231.360 kb on + strand, within Psest_1134 at 1231.360 kb on + strand, within Psest_1134
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 1,229,218 + Psest_1132 0.36 -0.2 1,229,218 + Psest_1132 0.36 -2.4 1,229,218 + Psest_1132 0.36 -0.7 1,229,219 - Psest_1132 0.36 -0.4 1,229,392 + Psest_1132 0.54 -0.4 1,229,393 - Psest_1132 0.54 +0.3 1,229,393 - Psest_1132 0.54 -3.1 1,229,615 + Psest_1132 0.78 -0.4 1,229,705 + Psest_1132 0.88 -0.6 1,229,726 - Psest_1132 0.90 -1.8 1,229,836 + -1.4 1,229,836 + -0.4 1,229,836 + +1.8 1,229,836 + +0.6 1,229,837 - +0.0 1,229,837 - -2.6 1,229,837 - +0.0 1,229,837 - -2.4 1,229,861 + -0.3 1,229,861 + +0.0 1,229,875 + +2.6 1,229,945 + -1.1 1,229,945 + +1.4 1,229,950 + -2.1 1,230,554 + +0.0 1,230,554 + -0.7 1,230,554 + +1.4 1,230,554 + +1.6 1,230,555 - +2.6 1,230,643 - -1.3 1,231,195 + Psest_1134 0.33 +0.3 1,231,360 + Psest_1134 0.44 +2.8 1,231,360 + Psest_1134 0.44 +0.2 1,231,360 + Psest_1134 0.44 -0.8
Or see this region's nucleotide sequence