Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1117 and Psest_1118 are separated by 57 nucleotides Psest_1118 and Psest_1119 are separated by 83 nucleotides Psest_1119 and Psest_1120 are separated by 2 nucleotides Psest_1120 and Psest_1121 are separated by 249 nucleotides
Psest_1117: Psest_1117 - Lipid A 3-O-deacylase (PagL)., at 1,211,410 to 1,211,928
_1117
Psest_1118: Psest_1118 - Predicted Fe-S-cluster oxidoreductase, at 1,211,986 to 1,212,297
_1118
Psest_1119: Psest_1119 - uracil-xanthine permease, at 1,212,381 to 1,213,640
_1119
Psest_1120: Psest_1120 - uracil phosphoribosyltransferase, at 1,213,643 to 1,214,281
_1120
Psest_1121: Psest_1121 - Hypoxanthine-guanine phosphoribosyltransferase, at 1,214,531 to 1,215,088
_1121
Position (kb)
1212
1213
1214 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1211.395 kb on + strand at 1211.395 kb on + strand at 1211.397 kb on + strand at 1211.397 kb on + strand at 1211.397 kb on + strand at 1211.398 kb on - strand at 1211.398 kb on - strand at 1211.617 kb on + strand, within Psest_1117 at 1211.618 kb on - strand, within Psest_1117 at 1211.677 kb on + strand, within Psest_1117 at 1211.677 kb on + strand, within Psest_1117 at 1211.678 kb on - strand, within Psest_1117 at 1211.707 kb on + strand, within Psest_1117 at 1211.707 kb on + strand, within Psest_1117 at 1211.707 kb on + strand, within Psest_1117 at 1211.745 kb on + strand, within Psest_1117 at 1211.855 kb on - strand, within Psest_1117 at 1211.926 kb on + strand at 1211.926 kb on + strand at 1211.926 kb on + strand at 1212.077 kb on + strand, within Psest_1118 at 1212.078 kb on - strand, within Psest_1118 at 1212.078 kb on - strand, within Psest_1118 at 1212.315 kb on + strand at 1212.315 kb on + strand at 1212.378 kb on + strand at 1212.378 kb on + strand at 1212.379 kb on - strand at 1212.379 kb on - strand at 1212.379 kb on - strand at 1212.379 kb on - strand at 1212.379 kb on - strand at 1212.379 kb on - strand at 1212.379 kb on - strand at 1212.745 kb on + strand, within Psest_1119 at 1212.745 kb on + strand, within Psest_1119 at 1212.745 kb on + strand, within Psest_1119 at 1212.745 kb on + strand, within Psest_1119 at 1212.746 kb on - strand, within Psest_1119 at 1212.746 kb on - strand, within Psest_1119 at 1212.746 kb on - strand, within Psest_1119 at 1212.746 kb on - strand, within Psest_1119 at 1212.746 kb on - strand, within Psest_1119 at 1212.746 kb on - strand, within Psest_1119 at 1212.746 kb on - strand, within Psest_1119 at 1212.877 kb on + strand, within Psest_1119 at 1212.877 kb on + strand, within Psest_1119 at 1212.877 kb on + strand, within Psest_1119 at 1212.877 kb on + strand, within Psest_1119 at 1212.878 kb on - strand, within Psest_1119 at 1212.878 kb on - strand, within Psest_1119 at 1212.878 kb on - strand, within Psest_1119 at 1212.878 kb on - strand, within Psest_1119 at 1212.878 kb on - strand, within Psest_1119 at 1212.998 kb on + strand, within Psest_1119 at 1213.142 kb on + strand, within Psest_1119 at 1213.143 kb on - strand, within Psest_1119 at 1213.354 kb on + strand, within Psest_1119 at 1213.354 kb on + strand, within Psest_1119 at 1213.354 kb on + strand, within Psest_1119 at 1213.354 kb on + strand, within Psest_1119 at 1213.354 kb on + strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.355 kb on - strand, within Psest_1119 at 1213.478 kb on + strand, within Psest_1119 at 1213.478 kb on + strand, within Psest_1119 at 1213.479 kb on - strand, within Psest_1119 at 1213.479 kb on - strand, within Psest_1119 at 1213.479 kb on - strand, within Psest_1119 at 1213.584 kb on + strand at 1213.707 kb on + strand, within Psest_1120 at 1213.850 kb on - strand, within Psest_1120 at 1213.944 kb on + strand, within Psest_1120 at 1213.945 kb on - strand, within Psest_1120 at 1213.945 kb on - strand, within Psest_1120 at 1214.128 kb on - strand, within Psest_1120 at 1214.160 kb on + strand, within Psest_1120 at 1214.160 kb on + strand, within Psest_1120 at 1214.161 kb on - strand, within Psest_1120 at 1214.161 kb on - strand, within Psest_1120 at 1214.161 kb on - strand, within Psest_1120 at 1214.161 kb on - strand, within Psest_1120 at 1214.161 kb on - strand, within Psest_1120 at 1214.161 kb on - strand, within Psest_1120 at 1214.302 kb on + strand at 1214.313 kb on - strand at 1214.391 kb on - strand at 1214.391 kb on - strand at 1214.501 kb on - strand at 1214.585 kb on + strand at 1214.585 kb on + strand at 1214.601 kb on + strand, within Psest_1121 at 1214.601 kb on + strand, within Psest_1121 at 1214.601 kb on + strand, within Psest_1121 at 1214.601 kb on + strand, within Psest_1121 at 1214.602 kb on - strand, within Psest_1121 at 1214.602 kb on - strand, within Psest_1121 at 1214.602 kb on - strand, within Psest_1121 at 1214.602 kb on - strand, within Psest_1121
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 1,211,395 + -0.9 1,211,395 + +0.8 1,211,397 + +0.7 1,211,397 + +0.7 1,211,397 + -2.4 1,211,398 - +0.7 1,211,398 - +1.4 1,211,617 + Psest_1117 0.40 +2.4 1,211,618 - Psest_1117 0.40 +0.4 1,211,677 + Psest_1117 0.51 +2.4 1,211,677 + Psest_1117 0.51 -0.9 1,211,678 - Psest_1117 0.52 +0.6 1,211,707 + Psest_1117 0.57 -0.3 1,211,707 + Psest_1117 0.57 -1.5 1,211,707 + Psest_1117 0.57 -1.9 1,211,745 + Psest_1117 0.65 +2.7 1,211,855 - Psest_1117 0.86 -1.2 1,211,926 + +0.1 1,211,926 + +0.7 1,211,926 + +1.1 1,212,077 + Psest_1118 0.29 -0.7 1,212,078 - Psest_1118 0.29 -2.6 1,212,078 - Psest_1118 0.29 +1.2 1,212,315 + +5.7 1,212,315 + +0.3 1,212,378 + +1.7 1,212,378 + -2.0 1,212,379 - +1.7 1,212,379 - -1.7 1,212,379 - +0.3 1,212,379 - -0.3 1,212,379 - +1.9 1,212,379 - -3.5 1,212,379 - -0.2 1,212,745 + Psest_1119 0.29 +2.0 1,212,745 + Psest_1119 0.29 +1.7 1,212,745 + Psest_1119 0.29 -2.0 1,212,745 + Psest_1119 0.29 -1.2 1,212,746 - Psest_1119 0.29 +1.1 1,212,746 - Psest_1119 0.29 -0.1 1,212,746 - Psest_1119 0.29 +2.1 1,212,746 - Psest_1119 0.29 +1.8 1,212,746 - Psest_1119 0.29 +2.2 1,212,746 - Psest_1119 0.29 -0.1 1,212,746 - Psest_1119 0.29 +0.3 1,212,877 + Psest_1119 0.39 +1.0 1,212,877 + Psest_1119 0.39 +1.0 1,212,877 + Psest_1119 0.39 +1.9 1,212,877 + Psest_1119 0.39 +2.2 1,212,878 - Psest_1119 0.39 +0.1 1,212,878 - Psest_1119 0.39 +0.5 1,212,878 - Psest_1119 0.39 +0.2 1,212,878 - Psest_1119 0.39 +2.2 1,212,878 - Psest_1119 0.39 -1.6 1,212,998 + Psest_1119 0.49 +0.0 1,213,142 + Psest_1119 0.60 +1.0 1,213,143 - Psest_1119 0.60 +1.2 1,213,354 + Psest_1119 0.77 -1.0 1,213,354 + Psest_1119 0.77 +0.5 1,213,354 + Psest_1119 0.77 +0.9 1,213,354 + Psest_1119 0.77 -1.6 1,213,354 + Psest_1119 0.77 -0.6 1,213,355 - Psest_1119 0.77 +0.8 1,213,355 - Psest_1119 0.77 +1.1 1,213,355 - Psest_1119 0.77 +0.7 1,213,355 - Psest_1119 0.77 +0.5 1,213,355 - Psest_1119 0.77 +1.8 1,213,355 - Psest_1119 0.77 -3.6 1,213,355 - Psest_1119 0.77 -0.7 1,213,355 - Psest_1119 0.77 +1.6 1,213,355 - Psest_1119 0.77 +0.7 1,213,355 - Psest_1119 0.77 +1.0 1,213,355 - Psest_1119 0.77 -1.7 1,213,355 - Psest_1119 0.77 +0.3 1,213,478 + Psest_1119 0.87 +0.8 1,213,478 + Psest_1119 0.87 -1.2 1,213,479 - Psest_1119 0.87 +0.9 1,213,479 - Psest_1119 0.87 +0.3 1,213,479 - Psest_1119 0.87 -2.0 1,213,584 + +2.7 1,213,707 + Psest_1120 0.10 -0.3 1,213,850 - Psest_1120 0.32 -0.6 1,213,944 + Psest_1120 0.47 +0.8 1,213,945 - Psest_1120 0.47 +1.1 1,213,945 - Psest_1120 0.47 -0.1 1,214,128 - Psest_1120 0.76 +1.7 1,214,160 + Psest_1120 0.81 -1.9 1,214,160 + Psest_1120 0.81 -0.8 1,214,161 - Psest_1120 0.81 -0.7 1,214,161 - Psest_1120 0.81 +0.5 1,214,161 - Psest_1120 0.81 +0.1 1,214,161 - Psest_1120 0.81 -3.4 1,214,161 - Psest_1120 0.81 -3.0 1,214,161 - Psest_1120 0.81 -2.1 1,214,302 + -0.0 1,214,313 - -1.0 1,214,391 - +0.3 1,214,391 - -3.1 1,214,501 - +0.2 1,214,585 + -1.7 1,214,585 + +0.9 1,214,601 + Psest_1121 0.13 -2.6 1,214,601 + Psest_1121 0.13 -1.7 1,214,601 + Psest_1121 0.13 +4.2 1,214,601 + Psest_1121 0.13 +1.7 1,214,602 - Psest_1121 0.13 -1.0 1,214,602 - Psest_1121 0.13 +0.3 1,214,602 - Psest_1121 0.13 +0.5 1,214,602 - Psest_1121 0.13 +0.1
Or see this region's nucleotide sequence