Experiment: Chlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1059 and Psest_1060 are separated by 180 nucleotides Psest_1060 and Psest_1061 are separated by 16 nucleotides
Psest_1059: Psest_1059 - hypothetical protein, at 1,148,663 to 1,149,205
_1059
Psest_1060: Psest_1060 - trehalose-phosphatase, at 1,149,386 to 1,150,162
_1060
Psest_1061: Psest_1061 - alpha,alpha-trehalose-phosphate synthase [UDP-forming], at 1,150,179 to 1,151,594
_1061
Position (kb)
1149
1150
1151 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1148.409 kb on - strand at 1148.561 kb on + strand at 1148.561 kb on + strand at 1148.562 kb on - strand at 1148.562 kb on - strand at 1148.562 kb on - strand at 1148.580 kb on + strand at 1148.580 kb on + strand at 1148.580 kb on + strand at 1148.580 kb on + strand at 1148.581 kb on - strand at 1148.581 kb on - strand at 1148.581 kb on - strand at 1148.581 kb on - strand at 1148.587 kb on - strand at 1148.610 kb on + strand at 1148.610 kb on + strand at 1148.611 kb on - strand at 1148.611 kb on - strand at 1148.611 kb on - strand at 1148.612 kb on + strand at 1148.612 kb on + strand at 1148.612 kb on + strand at 1148.612 kb on + strand at 1148.613 kb on - strand at 1148.613 kb on - strand at 1148.613 kb on - strand at 1148.613 kb on - strand at 1148.613 kb on - strand at 1148.664 kb on + strand at 1148.664 kb on + strand at 1148.665 kb on - strand at 1149.378 kb on + strand at 1149.379 kb on - strand at 1149.379 kb on - strand at 1150.161 kb on - strand at 1150.172 kb on + strand at 1150.172 kb on + strand at 1150.173 kb on - strand at 1150.189 kb on + strand at 1150.190 kb on - strand at 1150.190 kb on - strand at 1150.190 kb on - strand at 1150.192 kb on + strand at 1150.193 kb on - strand at 1150.263 kb on + strand at 1150.264 kb on - strand at 1150.362 kb on + strand, within Psest_1061 at 1150.362 kb on + strand, within Psest_1061 at 1150.362 kb on + strand, within Psest_1061 at 1150.362 kb on + strand, within Psest_1061 at 1150.362 kb on + strand, within Psest_1061 at 1150.362 kb on + strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.363 kb on - strand, within Psest_1061 at 1150.392 kb on + strand, within Psest_1061 at 1150.393 kb on - strand, within Psest_1061 at 1150.401 kb on + strand, within Psest_1061 at 1150.405 kb on - strand, within Psest_1061 at 1150.710 kb on + strand, within Psest_1061 at 1150.711 kb on - strand, within Psest_1061 at 1150.711 kb on - strand, within Psest_1061 at 1150.714 kb on - strand, within Psest_1061 at 1150.764 kb on + strand, within Psest_1061 at 1150.764 kb on + strand, within Psest_1061 at 1150.764 kb on + strand, within Psest_1061 at 1150.764 kb on + strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.765 kb on - strand, within Psest_1061 at 1150.893 kb on + strand, within Psest_1061 at 1150.894 kb on - strand, within Psest_1061 at 1151.094 kb on + strand, within Psest_1061 at 1151.094 kb on + strand, within Psest_1061 at 1151.094 kb on + strand, within Psest_1061 at 1151.094 kb on + strand, within Psest_1061 at 1151.094 kb on + strand, within Psest_1061
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 75 mM remove 1,148,409 - +1.1 1,148,561 + -0.5 1,148,561 + -1.9 1,148,562 - -1.1 1,148,562 - +1.1 1,148,562 - +1.9 1,148,580 + -1.2 1,148,580 + +0.3 1,148,580 + +2.7 1,148,580 + +0.1 1,148,581 - -0.3 1,148,581 - +0.3 1,148,581 - -0.5 1,148,581 - +0.3 1,148,587 - +2.1 1,148,610 + -0.3 1,148,610 + -0.2 1,148,611 - -0.1 1,148,611 - -0.3 1,148,611 - +0.3 1,148,612 + -0.2 1,148,612 + +0.7 1,148,612 + +0.3 1,148,612 + -2.0 1,148,613 - -0.3 1,148,613 - +1.1 1,148,613 - -0.3 1,148,613 - +0.7 1,148,613 - +1.7 1,148,664 + +1.7 1,148,664 + -1.7 1,148,665 - +0.1 1,149,378 + +0.7 1,149,379 - -0.9 1,149,379 - -0.4 1,150,161 - +0.6 1,150,172 + +1.4 1,150,172 + +0.7 1,150,173 - +0.7 1,150,189 + -2.7 1,150,190 - -1.9 1,150,190 - -1.0 1,150,190 - +0.9 1,150,192 + -0.8 1,150,193 - -1.2 1,150,263 + -0.3 1,150,264 - +1.1 1,150,362 + Psest_1061 0.13 -1.4 1,150,362 + Psest_1061 0.13 +0.1 1,150,362 + Psest_1061 0.13 -0.1 1,150,362 + Psest_1061 0.13 +1.1 1,150,362 + Psest_1061 0.13 +1.8 1,150,362 + Psest_1061 0.13 -0.7 1,150,363 - Psest_1061 0.13 -0.4 1,150,363 - Psest_1061 0.13 +0.0 1,150,363 - Psest_1061 0.13 +0.4 1,150,363 - Psest_1061 0.13 -0.3 1,150,363 - Psest_1061 0.13 +1.9 1,150,363 - Psest_1061 0.13 -1.1 1,150,363 - Psest_1061 0.13 -0.7 1,150,363 - Psest_1061 0.13 +2.7 1,150,363 - Psest_1061 0.13 +0.1 1,150,392 + Psest_1061 0.15 -1.5 1,150,393 - Psest_1061 0.15 +0.2 1,150,401 + Psest_1061 0.16 -1.0 1,150,405 - Psest_1061 0.16 +2.7 1,150,710 + Psest_1061 0.38 +2.1 1,150,711 - Psest_1061 0.38 -0.1 1,150,711 - Psest_1061 0.38 -0.3 1,150,714 - Psest_1061 0.38 -0.3 1,150,764 + Psest_1061 0.41 +0.3 1,150,764 + Psest_1061 0.41 -1.9 1,150,764 + Psest_1061 0.41 +1.1 1,150,764 + Psest_1061 0.41 +0.3 1,150,765 - Psest_1061 0.41 -0.2 1,150,765 - Psest_1061 0.41 +0.1 1,150,765 - Psest_1061 0.41 +0.1 1,150,765 - Psest_1061 0.41 +0.3 1,150,765 - Psest_1061 0.41 -0.1 1,150,765 - Psest_1061 0.41 +0.4 1,150,765 - Psest_1061 0.41 -1.7 1,150,765 - Psest_1061 0.41 +1.1 1,150,893 + Psest_1061 0.50 -0.3 1,150,894 - Psest_1061 0.50 +0.3 1,151,094 + Psest_1061 0.65 +0.1 1,151,094 + Psest_1061 0.65 +2.0 1,151,094 + Psest_1061 0.65 +0.1 1,151,094 + Psest_1061 0.65 +0.9 1,151,094 + Psest_1061 0.65 +0.7
Or see this region's nucleotide sequence