Strain Fitness in Shewanella amazonensis SB2B around Sama_1532

Experiment: L-Proline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (N)
1,861,746	+		Sama_1531	0.19	-0.6
1,861,767	+		Sama_1531	0.22	-0.1
1,861,768	-		Sama_1531	0.22	-0.4
1,861,778	+		Sama_1531	0.23	-0.4
1,861,821	+		Sama_1531	0.27	-1.2
1,861,821	+		Sama_1531	0.27	-1.0
1,861,823	+		Sama_1531	0.28	-0.6
1,861,823	+		Sama_1531	0.28	-0.0
1,861,823	+		Sama_1531	0.28	+0.0
1,861,823	+		Sama_1531	0.28	-2.4
1,861,824	-		Sama_1531	0.28	+0.5
1,861,824	-		Sama_1531	0.28	-0.2
1,862,005	+		Sama_1531	0.48	+1.2
1,862,005	+		Sama_1531	0.48	-1.8
1,862,006	-		Sama_1531	0.48	-0.0
1,862,006	-		Sama_1531	0.48	+0.5
1,862,006	-		Sama_1531	0.48	+0.4
1,862,047	-		Sama_1531	0.52	-2.0
1,862,076	+		Sama_1531	0.55	+0.9
1,862,078	+		Sama_1531	0.56	+0.1
1,862,079	-		Sama_1531	0.56	-1.5
1,862,079	-		Sama_1531	0.56	+0.8
1,862,079	-		Sama_1531	0.56	-1.6
1,862,088	+		Sama_1531	0.57	+0.9
1,862,088	+		Sama_1531	0.57	+0.5
1,862,153	+		Sama_1531	0.64	+1.1
1,862,154	-		Sama_1531	0.64	-1.8
1,862,154	-		Sama_1531	0.64	-0.3
1,862,175	+		Sama_1531	0.66	-1.2
1,862,175	+		Sama_1531	0.66	-2.2
1,862,201	-		Sama_1531	0.69	-2.4
1,862,201	-		Sama_1531	0.69	-0.3
1,862,213	+		Sama_1531	0.70	+0.5
1,862,213	+		Sama_1531	0.70	-0.3
1,862,213	+		Sama_1531	0.70	-0.2
1,862,235	+		Sama_1531	0.73	+0.2
1,862,245	-		Sama_1531	0.74	+0.7
1,862,341	+		Sama_1531	0.84	+0.5
1,862,341	+		Sama_1531	0.84	+1.0
1,862,341	+		Sama_1531	0.84	-0.5
1,862,341	+		Sama_1531	0.84	+0.5
1,862,342	-		Sama_1531	0.84	+0.6
1,862,342	-		Sama_1531	0.84	-0.8
1,862,342	-		Sama_1531	0.84	+0.3
1,862,342	-		Sama_1531	0.84	+0.1
1,862,342	-		Sama_1531	0.84	-0.2
1,862,347	-		Sama_1531	0.85	+0.4
1,862,382	+		Sama_1531	0.89	-0.9
1,862,382	+		Sama_1531	0.89	+0.3
1,862,383	-		Sama_1531	0.89	+0.0
1,862,397	+				-0.7
1,862,397	+				-0.3
1,862,398	-				-1.2
1,862,398	-				+0.0
1,862,398	-				+0.5
1,862,461	+				-0.8
1,862,462	-				+1.1
1,862,462	-				-0.2
1,862,462	-				-0.2
1,862,475	+				+0.4
1,862,476	-				+0.2
1,862,501	-				+0.6
1,862,501	-				-1.0
1,862,501	-				-0.4
1,862,531	+				-0.8
1,862,531	+				-1.4
1,862,551	+				-1.7
1,862,552	-				-0.2
1,862,569	+				-0.8
1,862,651	+				-0.8
1,862,653	+				-0.6
1,862,655	+				-1.1
1,862,655	+				-0.4
1,862,655	+				-1.7
1,862,656	-				-0.8
1,862,662	+				-0.4
1,862,663	-				-0.2
1,862,663	-				-0.3
1,862,668	-				-0.8
1,862,671	-				+0.3
1,862,674	+				+0.8
1,862,705	+				-0.9
1,862,717	+				+0.2
1,862,717	+				+0.8
1,862,718	-				-1.0
1,862,784	+				-1.7
1,862,861	-		Sama_1532	0.17	+0.5
1,862,905	+		Sama_1532	0.21	-0.4
1,862,905	+		Sama_1532	0.21	+0.1
1,862,905	+		Sama_1532	0.21	-0.1
1,862,905	+		Sama_1532	0.21	+0.1
1,862,905	+		Sama_1532	0.21	-0.0
1,862,906	-		Sama_1532	0.21	+0.1
1,862,906	-		Sama_1532	0.21	+0.4
1,862,906	-		Sama_1532	0.21	+1.2
1,862,978	-		Sama_1532	0.28	-0.4
1,863,002	+		Sama_1532	0.30	-0.4
1,863,068	+		Sama_1532	0.36	+0.2
1,863,068	+		Sama_1532	0.36	-0.4
1,863,074	+		Sama_1532	0.37	-0.5
1,863,074	+		Sama_1532	0.37	+0.1
1,863,075	-		Sama_1532	0.37	-0.1
1,863,075	-		Sama_1532	0.37	-0.0
1,863,075	-		Sama_1532	0.37	-0.7
1,863,180	-		Sama_1532	0.47	-0.4
1,863,200	+		Sama_1532	0.49	-0.0
1,863,200	+		Sama_1532	0.49	-0.7
1,863,200	+		Sama_1532	0.49	+0.6
1,863,200	+		Sama_1532	0.49	-0.6
1,863,201	-		Sama_1532	0.49	-0.2
1,863,201	-		Sama_1532	0.49	-0.4
1,863,201	-		Sama_1532	0.49	+0.4
1,863,201	-		Sama_1532	0.49	+0.4
1,863,201	-		Sama_1532	0.49	+0.6
1,863,238	+		Sama_1532	0.53	-0.1
1,863,238	+		Sama_1532	0.53	-0.3
1,863,238	+		Sama_1532	0.53	-0.9
1,863,238	+		Sama_1532	0.53	-0.5
1,863,242	-		Sama_1532	0.53	-0.5
1,863,247	+		Sama_1532	0.54	+1.6
1,863,247	+		Sama_1532	0.54	+0.2
1,863,247	+		Sama_1532	0.54	+0.1
1,863,247	+		Sama_1532	0.54	-0.2
1,863,248	-		Sama_1532	0.54	+0.6
1,863,248	-		Sama_1532	0.54	-0.4
1,863,248	-		Sama_1532	0.54	+0.2
1,863,248	-		Sama_1532	0.54	+0.2
1,863,248	-		Sama_1532	0.54	-0.0
1,863,386	+		Sama_1532	0.67	-0.4
1,863,387	-		Sama_1532	0.67	+0.9
1,863,389	-		Sama_1532	0.67	-0.2
1,863,402	+		Sama_1532	0.68	-0.2
1,863,402	+		Sama_1532	0.68	+0.5
1,863,414	+		Sama_1532	0.70	-0.4
1,863,415	-		Sama_1532	0.70	-0.2
1,863,634	-				-0.0
1,863,634	-				+0.0
1,863,634	-				-0.5
1,863,634	-				-0.8
1,863,661	-				-0.0
1,863,661	-				+0.5
1,863,661	-				+0.6
1,863,699	+				+0.2
1,863,700	-				+0.5
1,863,748	+				+0.3
1,863,749	-				-0.5
1,863,749	-				+0.2
1,863,763	-				-0.0
1,863,763	-				-0.8
1,863,801	+				-0.9
1,863,802	-				-0.6
1,863,807	+				-0.4
1,863,807	+				-0.7
1,863,807	+				-1.4
1,863,808	-				-1.4
1,863,808	-				+0.4
1,863,841	+				+0.2
1,863,842	-				-1.0
1,863,862	+				+0.5
1,863,863	-				-0.3
1,863,876	+		Sama_1533	0.11	-0.8
1,863,876	+		Sama_1533	0.11	-2.1
1,863,877	-		Sama_1533	0.11	+0.0
1,863,942	+		Sama_1533	0.16	-0.6
1,863,942	+		Sama_1533	0.16	-1.6
1,863,942	+		Sama_1533	0.16	-0.8
1,863,943	-		Sama_1533	0.16	+0.2
1,864,028	+		Sama_1533	0.22	-1.0
1,864,028	+		Sama_1533	0.22	+0.1
1,864,028	+		Sama_1533	0.22	-0.1
1,864,068	+		Sama_1533	0.25	-0.5
1,864,072	+		Sama_1533	0.26	+0.4
1,864,072	+		Sama_1533	0.26	-0.2
1,864,072	+		Sama_1533	0.26	+1.0
1,864,072	+		Sama_1533	0.26	+0.5
1,864,072	+		Sama_1533	0.26	+0.4
1,864,072	+		Sama_1533	0.26	+0.5
1,864,072	+		Sama_1533	0.26	+0.9
1,864,072	+		Sama_1533	0.26	+0.1
1,864,073	-		Sama_1533	0.26	-0.5
1,864,073	-		Sama_1533	0.26	-2.1
1,864,073	-		Sama_1533	0.26	+2.1
1,864,096	+		Sama_1533	0.28	+0.5
1,864,097	-		Sama_1533	0.28	+0.3
1,864,097	-		Sama_1533	0.28	-0.4
1,864,102	+		Sama_1533	0.28	-1.0
1,864,111	+		Sama_1533	0.29	-0.7
1,864,111	+		Sama_1533	0.29	-0.4
1,864,200	+		Sama_1533	0.36	+0.4
1,864,206	+		Sama_1533	0.36	-0.7
1,864,232	-		Sama_1533	0.38	-0.1
1,864,232	-		Sama_1533	0.38	+0.2
1,864,232	-		Sama_1533	0.38	+0.4
1,864,232	-		Sama_1533	0.38	-0.5
1,864,253	+		Sama_1533	0.40	+0.5
1,864,282	-		Sama_1533	0.42	-0.6
1,864,284	+		Sama_1533	0.42	-1.8
1,864,284	+		Sama_1533	0.42	+0.4
1,864,284	+		Sama_1533	0.42	-1.8
1,864,284	+		Sama_1533	0.42	-1.4
1,864,284	+		Sama_1533	0.42	+0.9
1,864,320	+		Sama_1533	0.45	+0.2
1,864,321	-		Sama_1533	0.45	+0.5
1,864,330	+		Sama_1533	0.46	+1.0
1,864,331	-		Sama_1533	0.46	-0.3
1,864,331	-		Sama_1533	0.46	+1.0
1,864,366	+		Sama_1533	0.49	-0.5
1,864,367	-		Sama_1533	0.49	-0.1
1,864,384	+		Sama_1533	0.50	+0.5
1,864,385	-		Sama_1533	0.50	-0.2
1,864,455	+		Sama_1533	0.56	+0.2
1,864,455	+		Sama_1533	0.56	+0.4
1,864,455	+		Sama_1533	0.56	+1.9
1,864,456	-		Sama_1533	0.56	+0.0
1,864,456	-		Sama_1533	0.56	-1.5
1,864,479	+		Sama_1533	0.57	-1.3
1,864,649	+		Sama_1533	0.71	+0.7
1,864,650	-		Sama_1533	0.71	-0.7
1,864,668	+		Sama_1533	0.72	-0.5
1,864,687	+		Sama_1533	0.74	-0.1
1,864,687	+		Sama_1533	0.74	-0.5
1,864,687	+		Sama_1533	0.74	-0.7