Strain Fitness in Shewanella amazonensis SB2B around Sama_0427

Experiment: L-Proline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (N)
524,189	-				-0.3
524,189	-				-1.3
524,189	-				-0.4
524,189	-				+0.9
524,189	-				-0.0
524,191	-				+2.6
524,191	-				-0.3
524,196	+				-1.5
524,197	-				+0.9
524,197	-				+0.3
524,197	-				-1.3
524,242	+				-0.5
524,242	+				+0.2
524,242	+				-0.1
524,243	-				+0.8
524,243	-				-0.4
524,322	+		Sama_0427	0.15	-1.0
524,322	+		Sama_0427	0.15	-0.4
524,322	+		Sama_0427	0.15	+1.1
524,322	+		Sama_0427	0.15	+1.0
524,322	+		Sama_0427	0.15	+1.2
524,322	+		Sama_0427	0.15	+0.4
524,322	+		Sama_0427	0.15	+0.5
524,322	+		Sama_0427	0.15	-0.4
524,322	+		Sama_0427	0.15	+0.3
524,323	-		Sama_0427	0.15	+1.7
524,323	-		Sama_0427	0.15	+0.1
524,323	-		Sama_0427	0.15	-1.6
524,323	-		Sama_0427	0.15	-0.9
524,323	-		Sama_0427	0.15	+0.8
524,323	-		Sama_0427	0.15	+0.2
524,323	-		Sama_0427	0.15	-0.2
524,323	-		Sama_0427	0.15	+0.4
524,323	-		Sama_0427	0.15	+1.4
524,323	-		Sama_0427	0.15	-0.3
524,469	-		Sama_0427	0.43	-0.8
524,469	-		Sama_0427	0.43	-1.0
524,469	-		Sama_0427	0.43	+0.3
524,469	-		Sama_0427	0.43	+0.2
524,470	+		Sama_0427	0.43	+0.4
524,471	-		Sama_0427	0.43	-0.9
524,471	-		Sama_0427	0.43	-0.1
524,484	-		Sama_0427	0.46	+0.1
524,668	-		Sama_0427	0.81	-0.9
524,678	+		Sama_0427	0.83	+0.5
524,679	-		Sama_0427	0.83	+0.8
524,679	-		Sama_0427	0.83	-0.6
524,699	+		Sama_0427	0.87	-0.7
524,699	+		Sama_0427	0.87	+0.5
524,700	-		Sama_0427	0.87	+1.1
524,700	-		Sama_0427	0.87	+0.5
524,716	+				+0.1
524,716	+				+0.3
524,716	+				-0.8
524,716	+				+0.2
524,717	-				+0.1
524,726	+				+0.3
524,726	+				+0.5
524,726	+				+1.1
524,726	+				-0.0
524,726	+				-1.2
524,726	+				+0.2
524,726	+				+0.2
524,726	+				-0.5
524,726	+				-0.1
524,726	+				-0.0
524,727	-				+0.4
524,727	-				-0.4
524,727	-				-0.5
524,727	-				-0.2
524,727	-				-1.8
524,727	-				-0.6
524,728	+				+0.4
524,728	+				-1.0
524,728	+				+0.0
524,728	+				-1.1
524,728	+				-1.7
524,728	+				-0.4
524,728	+				-0.8
524,728	+				+0.6
524,729	-				+0.4
524,729	-				+0.0
524,729	-				+0.4
524,729	-				-0.9
524,729	-				-0.4
524,729	-				+0.2
524,729	-				-1.0
524,729	-				-0.5
524,766	-				-0.0
524,768	+				+0.1
524,768	+				+1.3
524,768	+				+0.4
524,768	+				+0.4
524,803	+				-0.8
524,916	+				+0.1
524,916	+				+0.5
524,916	+				-0.3
524,916	+				-0.7
524,916	+				+0.2
524,916	+				-2.7
524,916	+				-2.6
524,916	+				+0.7
524,916	+				+0.0
524,916	+				-1.6
524,916	+				+0.4
524,916	+				-0.2
524,917	-				-0.8
524,917	-				-0.2
524,917	-				-0.6
524,917	-				-0.3
524,917	-				-2.0
524,917	-				-0.4
524,917	-				-1.6
524,917	-				-0.3
524,917	-				-0.9
524,967	+				+0.9
524,967	+				+0.0
524,967	+				-0.6
524,967	+				-0.3
524,967	+				-0.2
524,967	+				-0.2
524,967	+				+0.0
524,968	-				-1.0
524,968	-				-0.3
524,968	-				-1.3
524,968	-				+1.3
524,968	-				-0.3
524,980	+				-0.0
524,980	+				-2.4
524,980	+				-0.1
524,980	+				+1.1
524,981	-				-0.3
525,138	+		Sama_0428	0.14	+0.0
525,138	+		Sama_0428	0.14	-0.2
525,138	+		Sama_0428	0.14	+0.0
525,138	+		Sama_0428	0.14	+1.2
525,138	+		Sama_0428	0.14	-0.2
525,138	+		Sama_0428	0.14	-0.5
525,138	+		Sama_0428	0.14	-0.9
525,139	-		Sama_0428	0.14	-0.7
525,139	-		Sama_0428	0.14	+0.5
525,139	-		Sama_0428	0.14	+0.4
525,139	-		Sama_0428	0.14	-2.5
525,156	+		Sama_0428	0.14	+0.0
525,157	-		Sama_0428	0.15	+0.5
525,157	-		Sama_0428	0.15	-0.8
525,157	-		Sama_0428	0.15	-0.3
525,157	-		Sama_0428	0.15	+1.0
525,241	+		Sama_0428	0.18	+0.5
525,241	+		Sama_0428	0.18	-0.7
525,242	-		Sama_0428	0.18	-2.2
525,261	+		Sama_0428	0.19	-1.0
525,276	+		Sama_0428	0.20	-0.3
525,276	+		Sama_0428	0.20	-0.7
525,360	+		Sama_0428	0.23	-0.1
525,361	-		Sama_0428	0.23	-0.9
525,361	-		Sama_0428	0.23	-1.5
525,369	+		Sama_0428	0.24	+0.6
525,390	+		Sama_0428	0.25	+0.1
525,390	+		Sama_0428	0.25	-0.8
525,390	+		Sama_0428	0.25	-1.2
525,390	+		Sama_0428	0.25	-1.0
525,390	+		Sama_0428	0.25	+0.5
525,391	-		Sama_0428	0.25	+1.2
525,391	-		Sama_0428	0.25	-0.5
525,391	-		Sama_0428	0.25	-0.2
525,391	-		Sama_0428	0.25	+0.2
525,394	+		Sama_0428	0.25	-1.4
525,395	-		Sama_0428	0.25	-1.1
525,444	+		Sama_0428	0.27	-1.2
525,445	-		Sama_0428	0.27	-0.2
525,459	+		Sama_0428	0.27	-0.3
525,495	+		Sama_0428	0.29	+0.2
525,495	+		Sama_0428	0.29	+1.2
525,495	+		Sama_0428	0.29	+0.0
525,495	+		Sama_0428	0.29	+0.1
525,495	+		Sama_0428	0.29	+0.8
525,495	+		Sama_0428	0.29	-1.2
525,496	-		Sama_0428	0.29	-1.7
525,496	-		Sama_0428	0.29	-0.8
525,496	-		Sama_0428	0.29	+0.9
525,496	-		Sama_0428	0.29	+0.8
525,496	-		Sama_0428	0.29	-0.2
525,496	-		Sama_0428	0.29	-0.8
525,573	+		Sama_0428	0.32	-0.6
525,573	+		Sama_0428	0.32	+0.7
525,629	+		Sama_0428	0.35	-2.5
525,629	+		Sama_0428	0.35	-0.6
525,704	+		Sama_0428	0.38	-1.0
525,705	-		Sama_0428	0.38	+1.3
525,705	-		Sama_0428	0.38	+0.4
525,720	+		Sama_0428	0.39	-1.2
525,721	-		Sama_0428	0.39	-1.0
525,765	+		Sama_0428	0.41	-0.2
525,765	+		Sama_0428	0.41	+0.0
525,765	+		Sama_0428	0.41	+0.2
525,765	+		Sama_0428	0.41	-0.3
525,765	+		Sama_0428	0.41	-0.5
525,765	+		Sama_0428	0.41	-0.6
525,765	+		Sama_0428	0.41	-0.6
525,765	+		Sama_0428	0.41	-0.2
525,765	+		Sama_0428	0.41	-0.3
525,765	+		Sama_0428	0.41	-1.5
525,765	+		Sama_0428	0.41	-0.2
525,765	+		Sama_0428	0.41	-0.1
525,765	+		Sama_0428	0.41	+0.3
525,765	+		Sama_0428	0.41	-0.3
525,765	+		Sama_0428	0.41	-0.6
525,765	+		Sama_0428	0.41	-1.0
525,765	+		Sama_0428	0.41	+0.1
525,766	-		Sama_0428	0.41	-0.5
525,766	-		Sama_0428	0.41	-1.5
525,766	-		Sama_0428	0.41	+0.4
525,766	-		Sama_0428	0.41	+1.3
525,766	-		Sama_0428	0.41	-0.8
525,766	-		Sama_0428	0.41	+0.3
525,766	-		Sama_0428	0.41	-2.2
525,766	-		Sama_0428	0.41	-0.7
525,766	-		Sama_0428	0.41	+0.9