Experiment: m.b. Doxycycline hyclate 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_69 and HP15_70 are separated by 12 nucleotides
HP15_69: HP15_69 - hypothetical protein, at 78,075 to 78,182
_69
HP15_70: HP15_70 - conserved hypothetical protein, at 78,195 to 78,506
_70
Position (kb)
78
79 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 77.089 kb on + strand at 77.089 kb on + strand at 77.089 kb on + strand at 77.089 kb on + strand at 77.092 kb on - strand at 77.097 kb on - strand at 77.183 kb on + strand at 77.331 kb on - strand at 77.353 kb on + strand at 77.378 kb on - strand at 77.379 kb on + strand at 77.478 kb on - strand at 77.565 kb on + strand at 77.594 kb on + strand at 77.607 kb on - strand at 77.639 kb on + strand at 77.667 kb on + strand at 77.782 kb on - strand at 77.839 kb on + strand at 77.892 kb on + strand at 77.957 kb on - strand at 78.061 kb on - strand at 78.071 kb on - strand at 78.071 kb on - strand at 78.071 kb on - strand at 78.077 kb on - strand at 78.082 kb on + strand at 78.110 kb on - strand, within HP15_69 at 78.164 kb on + strand, within HP15_69 at 78.330 kb on + strand, within HP15_70 at 78.330 kb on + strand, within HP15_70 at 78.357 kb on + strand, within HP15_70 at 78.359 kb on - strand, within HP15_70 at 78.365 kb on - strand, within HP15_70 at 78.377 kb on - strand, within HP15_70 at 78.398 kb on + strand, within HP15_70 at 78.585 kb on + strand at 78.593 kb on - strand at 78.610 kb on - strand at 78.625 kb on - strand at 78.640 kb on + strand at 78.648 kb on - strand at 78.680 kb on - strand at 78.699 kb on + strand at 78.710 kb on + strand at 78.732 kb on - strand at 78.797 kb on - strand at 78.902 kb on + strand at 78.940 kb on - strand at 78.958 kb on - strand at 79.020 kb on - strand at 79.032 kb on + strand at 79.089 kb on + strand at 79.101 kb on + strand at 79.157 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.032 mg/ml remove 77,089 + -3.1 77,089 + -0.0 77,089 + -0.7 77,089 + +0.5 77,092 - -0.2 77,097 - -1.4 77,183 + -0.6 77,331 - +0.6 77,353 + +1.9 77,378 - +0.2 77,379 + +0.1 77,478 - +0.4 77,565 + +0.2 77,594 + -0.2 77,607 - -0.1 77,639 + -1.2 77,667 + +0.1 77,782 - +2.9 77,839 + -2.7 77,892 + +0.7 77,957 - -0.8 78,061 - +0.0 78,071 - -0.8 78,071 - -0.9 78,071 - +1.6 78,077 - -0.4 78,082 + -1.1 78,110 - HP15_69 0.32 -0.3 78,164 + HP15_69 0.82 -1.4 78,330 + HP15_70 0.43 +0.5 78,330 + HP15_70 0.43 +0.3 78,357 + HP15_70 0.52 -0.7 78,359 - HP15_70 0.53 +2.3 78,365 - HP15_70 0.54 -0.7 78,377 - HP15_70 0.58 -0.5 78,398 + HP15_70 0.65 -0.2 78,585 + -0.4 78,593 - -0.1 78,610 - -0.6 78,625 - -0.3 78,640 + -0.4 78,648 - +0.5 78,680 - -0.0 78,699 + +0.5 78,710 + -0.8 78,732 - -0.7 78,797 - +0.3 78,902 + -1.7 78,940 - -2.3 78,958 - -1.2 79,020 - -1.9 79,032 + -0.5 79,089 + +0.2 79,101 + +0.5 79,157 + -0.2
Or see this region's nucleotide sequence