Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c06720 and PGA1_c06730 are separated by 406 nucleotides PGA1_c06730 and PGA1_c06740 are separated by 32 nucleotides PGA1_c06740 and PGA1_c06750 are separated by 123 nucleotides
PGA1_c06720: PGA1_c06720 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 690,052 to 690,477
_c06720
PGA1_c06730: PGA1_c06730 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 690,884 to 692,806
_c06730
PGA1_c06740: PGA1_c06740 - octanoyltransferase LipB, at 692,839 to 693,510
_c06740
PGA1_c06750: PGA1_c06750 - Putative peptidoglycan binding domain., at 693,634 to 695,295
_c06750
Position (kb) 690
691
692
693 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 689.892 kb on + strand at 689.900 kb on - strand at 690.033 kb on + strand at 690.041 kb on - strand at 690.041 kb on - strand at 690.110 kb on - strand, within PGA1_c06720 at 690.118 kb on + strand, within PGA1_c06720 at 690.118 kb on + strand, within PGA1_c06720 at 690.126 kb on - strand, within PGA1_c06720 at 690.126 kb on - strand, within PGA1_c06720 at 690.126 kb on - strand, within PGA1_c06720 at 690.126 kb on - strand, within PGA1_c06720 at 690.133 kb on - strand, within PGA1_c06720 at 690.136 kb on + strand, within PGA1_c06720 at 690.138 kb on - strand, within PGA1_c06720 at 690.144 kb on - strand, within PGA1_c06720 at 690.173 kb on + strand, within PGA1_c06720 at 690.173 kb on + strand, within PGA1_c06720 at 690.173 kb on + strand, within PGA1_c06720 at 690.226 kb on + strand, within PGA1_c06720 at 690.252 kb on - strand, within PGA1_c06720 at 690.264 kb on - strand, within PGA1_c06720 at 690.272 kb on + strand, within PGA1_c06720 at 690.300 kb on + strand, within PGA1_c06720 at 690.327 kb on + strand, within PGA1_c06720 at 690.327 kb on + strand, within PGA1_c06720 at 690.335 kb on - strand, within PGA1_c06720 at 690.335 kb on - strand, within PGA1_c06720 at 690.464 kb on - strand at 690.476 kb on + strand at 690.493 kb on + strand at 690.493 kb on + strand at 690.602 kb on - strand at 690.655 kb on + strand at 690.663 kb on - strand at 690.756 kb on + strand at 690.769 kb on - strand at 690.788 kb on + strand at 690.806 kb on - strand at 690.826 kb on - strand at 690.869 kb on - strand at 690.876 kb on + strand at 690.886 kb on + strand at 690.894 kb on - strand at 690.901 kb on + strand at 690.909 kb on - strand at 690.933 kb on + strand at 690.993 kb on - strand at 691.063 kb on - strand at 691.093 kb on + strand, within PGA1_c06730 at 691.111 kb on - strand, within PGA1_c06730 at 691.138 kb on - strand, within PGA1_c06730 at 691.164 kb on - strand, within PGA1_c06730 at 691.175 kb on + strand, within PGA1_c06730 at 691.175 kb on + strand, within PGA1_c06730 at 691.175 kb on + strand, within PGA1_c06730 at 691.175 kb on + strand, within PGA1_c06730 at 691.183 kb on - strand, within PGA1_c06730 at 691.300 kb on + strand, within PGA1_c06730 at 691.331 kb on + strand, within PGA1_c06730 at 691.390 kb on + strand, within PGA1_c06730 at 691.390 kb on + strand, within PGA1_c06730 at 691.398 kb on - strand, within PGA1_c06730 at 691.398 kb on - strand, within PGA1_c06730 at 691.455 kb on - strand, within PGA1_c06730 at 691.462 kb on + strand, within PGA1_c06730 at 691.472 kb on + strand, within PGA1_c06730 at 691.472 kb on + strand, within PGA1_c06730 at 691.472 kb on + strand, within PGA1_c06730 at 691.472 kb on + strand, within PGA1_c06730 at 691.480 kb on - strand, within PGA1_c06730 at 691.480 kb on - strand, within PGA1_c06730 at 691.502 kb on + strand, within PGA1_c06730 at 691.562 kb on + strand, within PGA1_c06730 at 691.562 kb on + strand, within PGA1_c06730 at 691.562 kb on + strand, within PGA1_c06730 at 691.570 kb on - strand, within PGA1_c06730 at 691.584 kb on - strand, within PGA1_c06730 at 691.610 kb on - strand, within PGA1_c06730 at 691.648 kb on - strand, within PGA1_c06730 at 691.649 kb on + strand, within PGA1_c06730 at 691.727 kb on + strand, within PGA1_c06730 at 691.735 kb on - strand, within PGA1_c06730 at 691.769 kb on + strand, within PGA1_c06730 at 691.782 kb on + strand, within PGA1_c06730 at 691.796 kb on + strand, within PGA1_c06730 at 691.804 kb on - strand, within PGA1_c06730 at 691.827 kb on - strand, within PGA1_c06730 at 691.879 kb on - strand, within PGA1_c06730 at 691.886 kb on + strand, within PGA1_c06730 at 691.888 kb on - strand, within PGA1_c06730 at 692.033 kb on + strand, within PGA1_c06730 at 692.040 kb on - strand, within PGA1_c06730 at 692.041 kb on - strand, within PGA1_c06730 at 692.067 kb on + strand, within PGA1_c06730 at 692.166 kb on - strand, within PGA1_c06730 at 692.191 kb on - strand, within PGA1_c06730 at 692.192 kb on - strand, within PGA1_c06730 at 692.302 kb on + strand, within PGA1_c06730 at 692.307 kb on + strand, within PGA1_c06730 at 692.307 kb on + strand, within PGA1_c06730 at 692.307 kb on + strand, within PGA1_c06730 at 692.307 kb on + strand, within PGA1_c06730 at 692.312 kb on + strand, within PGA1_c06730 at 692.315 kb on - strand, within PGA1_c06730 at 692.315 kb on - strand, within PGA1_c06730 at 692.315 kb on - strand, within PGA1_c06730 at 692.315 kb on - strand, within PGA1_c06730 at 692.315 kb on - strand, within PGA1_c06730 at 692.317 kb on + strand, within PGA1_c06730 at 692.320 kb on - strand, within PGA1_c06730 at 692.363 kb on + strand, within PGA1_c06730 at 692.363 kb on + strand, within PGA1_c06730 at 692.371 kb on - strand, within PGA1_c06730 at 692.371 kb on - strand, within PGA1_c06730 at 692.371 kb on - strand, within PGA1_c06730 at 692.371 kb on - strand, within PGA1_c06730 at 692.378 kb on + strand, within PGA1_c06730 at 692.378 kb on + strand, within PGA1_c06730 at 692.426 kb on + strand, within PGA1_c06730 at 692.435 kb on - strand, within PGA1_c06730 at 692.572 kb on - strand, within PGA1_c06730 at 692.622 kb on + strand at 692.622 kb on + strand at 692.622 kb on + strand at 692.630 kb on - strand at 692.630 kb on - strand at 692.630 kb on - strand at 692.632 kb on + strand at 692.655 kb on + strand at 692.660 kb on + strand at 692.663 kb on - strand at 692.663 kb on - strand at 692.665 kb on - strand at 692.694 kb on + strand at 692.725 kb on + strand at 692.738 kb on - strand at 692.740 kb on + strand at 692.806 kb on + strand at 692.806 kb on + strand at 692.806 kb on + strand at 692.836 kb on + strand at 692.844 kb on - strand at 692.857 kb on - strand at 692.862 kb on - strand at 693.539 kb on + strand at 693.544 kb on + strand at 693.544 kb on + strand at 693.544 kb on + strand at 693.544 kb on + strand at 693.552 kb on - strand at 693.552 kb on - strand at 693.552 kb on - strand at 693.594 kb on + strand at 693.673 kb on + strand at 693.676 kb on - strand at 693.676 kb on - strand at 693.676 kb on - strand at 693.681 kb on - strand at 693.683 kb on + strand at 693.683 kb on + strand at 693.714 kb on + strand at 693.714 kb on + strand at 693.749 kb on + strand at 693.757 kb on - strand at 693.769 kb on + strand at 693.777 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 689,892 + -0.6 689,900 - +0.2 690,033 + -1.2 690,041 - -1.4 690,041 - -0.7 690,110 - PGA1_c06720 0.14 +0.9 690,118 + PGA1_c06720 0.15 -1.1 690,118 + PGA1_c06720 0.15 -1.1 690,126 - PGA1_c06720 0.17 -0.7 690,126 - PGA1_c06720 0.17 +1.3 690,126 - PGA1_c06720 0.17 -0.2 690,126 - PGA1_c06720 0.17 -1.1 690,133 - PGA1_c06720 0.19 -0.6 690,136 + PGA1_c06720 0.20 +0.2 690,138 - PGA1_c06720 0.20 -0.7 690,144 - PGA1_c06720 0.22 -0.0 690,173 + PGA1_c06720 0.28 +0.9 690,173 + PGA1_c06720 0.28 -2.2 690,173 + PGA1_c06720 0.28 +1.1 690,226 + PGA1_c06720 0.41 -0.9 690,252 - PGA1_c06720 0.47 -0.7 690,264 - PGA1_c06720 0.50 -0.0 690,272 + PGA1_c06720 0.52 -1.0 690,300 + PGA1_c06720 0.58 +0.7 690,327 + PGA1_c06720 0.65 +0.5 690,327 + PGA1_c06720 0.65 +0.1 690,335 - PGA1_c06720 0.66 -1.4 690,335 - PGA1_c06720 0.66 +0.6 690,464 - -0.0 690,476 + +0.1 690,493 + -0.8 690,493 + -0.7 690,602 - -1.1 690,655 + -0.6 690,663 - -2.6 690,756 + -1.9 690,769 - -1.8 690,788 + -0.6 690,806 - -1.4 690,826 - +0.1 690,869 - -2.3 690,876 + -0.2 690,886 + +0.2 690,894 - -1.1 690,901 + +0.1 690,909 - +2.7 690,933 + -0.6 690,993 - -1.4 691,063 - -2.1 691,093 + PGA1_c06730 0.11 +2.1 691,111 - PGA1_c06730 0.12 -0.1 691,138 - PGA1_c06730 0.13 -0.1 691,164 - PGA1_c06730 0.15 -0.4 691,175 + PGA1_c06730 0.15 -0.3 691,175 + PGA1_c06730 0.15 +0.2 691,175 + PGA1_c06730 0.15 -2.6 691,175 + PGA1_c06730 0.15 -1.1 691,183 - PGA1_c06730 0.16 +0.1 691,300 + PGA1_c06730 0.22 -1.1 691,331 + PGA1_c06730 0.23 -1.7 691,390 + PGA1_c06730 0.26 -1.0 691,390 + PGA1_c06730 0.26 -0.7 691,398 - PGA1_c06730 0.27 +0.4 691,398 - PGA1_c06730 0.27 +0.1 691,455 - PGA1_c06730 0.30 +1.3 691,462 + PGA1_c06730 0.30 +1.3 691,472 + PGA1_c06730 0.31 -0.3 691,472 + PGA1_c06730 0.31 -2.0 691,472 + PGA1_c06730 0.31 -1.3 691,472 + PGA1_c06730 0.31 +0.1 691,480 - PGA1_c06730 0.31 -0.1 691,480 - PGA1_c06730 0.31 -0.3 691,502 + PGA1_c06730 0.32 -0.3 691,562 + PGA1_c06730 0.35 +0.9 691,562 + PGA1_c06730 0.35 +1.2 691,562 + PGA1_c06730 0.35 -1.4 691,570 - PGA1_c06730 0.36 -0.7 691,584 - PGA1_c06730 0.36 -2.1 691,610 - PGA1_c06730 0.38 +1.9 691,648 - PGA1_c06730 0.40 +0.8 691,649 + PGA1_c06730 0.40 +0.2 691,727 + PGA1_c06730 0.44 +0.6 691,735 - PGA1_c06730 0.44 -0.5 691,769 + PGA1_c06730 0.46 -1.4 691,782 + PGA1_c06730 0.47 +0.9 691,796 + PGA1_c06730 0.47 -2.2 691,804 - PGA1_c06730 0.48 +2.0 691,827 - PGA1_c06730 0.49 -0.9 691,879 - PGA1_c06730 0.52 +0.2 691,886 + PGA1_c06730 0.52 -0.2 691,888 - PGA1_c06730 0.52 +0.3 692,033 + PGA1_c06730 0.60 +0.1 692,040 - PGA1_c06730 0.60 -1.7 692,041 - PGA1_c06730 0.60 +0.9 692,067 + PGA1_c06730 0.62 +0.1 692,166 - PGA1_c06730 0.67 +0.0 692,191 - PGA1_c06730 0.68 +0.9 692,192 - PGA1_c06730 0.68 +0.7 692,302 + PGA1_c06730 0.74 -2.3 692,307 + PGA1_c06730 0.74 -1.0 692,307 + PGA1_c06730 0.74 -0.6 692,307 + PGA1_c06730 0.74 -2.7 692,307 + PGA1_c06730 0.74 -1.4 692,312 + PGA1_c06730 0.74 -2.8 692,315 - PGA1_c06730 0.74 -1.3 692,315 - PGA1_c06730 0.74 +0.9 692,315 - PGA1_c06730 0.74 -1.4 692,315 - PGA1_c06730 0.74 -1.7 692,315 - PGA1_c06730 0.74 -3.1 692,317 + PGA1_c06730 0.75 -1.0 692,320 - PGA1_c06730 0.75 -1.4 692,363 + PGA1_c06730 0.77 +0.9 692,363 + PGA1_c06730 0.77 -0.5 692,371 - PGA1_c06730 0.77 +1.1 692,371 - PGA1_c06730 0.77 +1.4 692,371 - PGA1_c06730 0.77 -0.9 692,371 - PGA1_c06730 0.77 -0.9 692,378 + PGA1_c06730 0.78 -2.3 692,378 + PGA1_c06730 0.78 -1.4 692,426 + PGA1_c06730 0.80 -0.9 692,435 - PGA1_c06730 0.81 -1.9 692,572 - PGA1_c06730 0.88 -0.6 692,622 + +1.9 692,622 + -2.0 692,622 + +0.9 692,630 - -1.0 692,630 - -1.7 692,630 - +0.0 692,632 + -0.1 692,655 + -1.1 692,660 + -0.4 692,663 - -1.4 692,663 - -2.9 692,665 - +0.1 692,694 + +0.7 692,725 + -0.1 692,738 - -1.0 692,740 + -1.7 692,806 + -1.4 692,806 + -2.9 692,806 + -0.6 692,836 + -1.7 692,844 - +1.5 692,857 - +0.5 692,862 - -1.0 693,539 + +0.5 693,544 + +0.3 693,544 + -0.7 693,544 + -3.7 693,544 + +0.5 693,552 - +2.2 693,552 - -0.4 693,552 - -0.7 693,594 + -1.3 693,673 + -0.8 693,676 - +0.5 693,676 - +0.3 693,676 - -0.1 693,681 - -0.3 693,683 + -3.6 693,683 + -1.5 693,714 + +1.1 693,714 + -0.8 693,749 + -0.5 693,757 - -0.4 693,769 + -0.7 693,777 - -0.4
Or see this region's nucleotide sequence