Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c04900 and PGA1_c04910 are separated by 197 nucleotides PGA1_c04910 and PGA1_c04920 are separated by 124 nucleotides PGA1_c04920 and PGA1_c04930 are separated by 135 nucleotides
PGA1_c04900: PGA1_c04900 - peptidyl-tRNA hydrolase Pth, at 481,557 to 482,315
_c04900
PGA1_c04910: PGA1_c04910 - 50S ribosomal protein L25, at 482,513 to 483,142
_c04910
PGA1_c04920: PGA1_c04920 - l-lactate dehydrogenase IldD, at 483,267 to 484,433
_c04920
PGA1_c04930: PGA1_c04930 - tryptophan synthase alpha chain, at 484,569 to 485,360
_c04930
Position (kb) 483
484
485 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 482.327 kb on - strand at 482.327 kb on - strand at 482.327 kb on - strand at 482.329 kb on - strand at 482.341 kb on - strand at 482.350 kb on + strand at 482.350 kb on + strand at 482.350 kb on + strand at 482.350 kb on + strand at 482.358 kb on + strand at 482.358 kb on + strand at 482.358 kb on + strand at 482.358 kb on - strand at 482.358 kb on - strand at 482.366 kb on - strand at 482.366 kb on - strand at 482.399 kb on + strand at 482.419 kb on - strand at 482.421 kb on + strand at 482.435 kb on + strand at 482.435 kb on + strand at 482.443 kb on - strand at 483.252 kb on - strand at 483.326 kb on - strand at 483.357 kb on + strand at 483.403 kb on - strand, within PGA1_c04920 at 483.418 kb on - strand, within PGA1_c04920 at 483.513 kb on + strand, within PGA1_c04920 at 483.521 kb on - strand, within PGA1_c04920 at 483.521 kb on - strand, within PGA1_c04920 at 483.523 kb on + strand, within PGA1_c04920 at 483.577 kb on - strand, within PGA1_c04920 at 483.584 kb on - strand, within PGA1_c04920 at 483.617 kb on + strand, within PGA1_c04920 at 483.631 kb on + strand, within PGA1_c04920 at 483.682 kb on + strand, within PGA1_c04920 at 483.742 kb on + strand, within PGA1_c04920 at 483.743 kb on + strand, within PGA1_c04920 at 483.751 kb on - strand, within PGA1_c04920 at 483.784 kb on + strand, within PGA1_c04920 at 483.851 kb on + strand, within PGA1_c04920 at 483.885 kb on + strand, within PGA1_c04920 at 483.893 kb on - strand, within PGA1_c04920 at 483.924 kb on + strand, within PGA1_c04920 at 483.924 kb on + strand, within PGA1_c04920 at 483.952 kb on - strand, within PGA1_c04920 at 484.003 kb on + strand, within PGA1_c04920 at 484.007 kb on + strand, within PGA1_c04920 at 484.050 kb on - strand, within PGA1_c04920 at 484.128 kb on - strand, within PGA1_c04920 at 484.138 kb on - strand, within PGA1_c04920 at 484.156 kb on + strand, within PGA1_c04920 at 484.202 kb on + strand, within PGA1_c04920 at 484.235 kb on - strand, within PGA1_c04920 at 484.249 kb on + strand, within PGA1_c04920 at 484.257 kb on + strand, within PGA1_c04920 at 484.257 kb on - strand, within PGA1_c04920 at 484.300 kb on - strand, within PGA1_c04920 at 484.329 kb on + strand at 484.435 kb on + strand at 484.443 kb on - strand at 484.443 kb on - strand at 484.443 kb on - strand at 484.453 kb on - strand at 484.499 kb on + strand at 484.507 kb on - strand at 484.526 kb on - strand at 485.363 kb on - strand at 485.392 kb on - strand at 485.412 kb on + strand at 485.420 kb on - strand at 485.420 kb on - strand at 485.426 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 482,327 - +0.8 482,327 - -0.9 482,327 - -0.5 482,329 - +0.0 482,341 - -0.4 482,350 + +1.2 482,350 + +0.8 482,350 + -0.8 482,350 + -0.1 482,358 + +0.7 482,358 + -1.1 482,358 + +0.5 482,358 - -0.3 482,358 - -0.1 482,366 - +0.3 482,366 - +1.0 482,399 + +0.2 482,419 - -2.8 482,421 + +0.4 482,435 + -0.0 482,435 + -0.6 482,443 - -0.3 483,252 - +1.3 483,326 - +0.7 483,357 + -0.2 483,403 - PGA1_c04920 0.12 -0.3 483,418 - PGA1_c04920 0.13 -3.2 483,513 + PGA1_c04920 0.21 +0.0 483,521 - PGA1_c04920 0.22 -1.4 483,521 - PGA1_c04920 0.22 -0.7 483,523 + PGA1_c04920 0.22 -1.4 483,577 - PGA1_c04920 0.27 -0.9 483,584 - PGA1_c04920 0.27 -3.5 483,617 + PGA1_c04920 0.30 -0.5 483,631 + PGA1_c04920 0.31 -1.2 483,682 + PGA1_c04920 0.36 -2.4 483,742 + PGA1_c04920 0.41 +0.5 483,743 + PGA1_c04920 0.41 -0.2 483,751 - PGA1_c04920 0.41 +0.0 483,784 + PGA1_c04920 0.44 -1.7 483,851 + PGA1_c04920 0.50 +0.8 483,885 + PGA1_c04920 0.53 +0.1 483,893 - PGA1_c04920 0.54 -0.5 483,924 + PGA1_c04920 0.56 -0.7 483,924 + PGA1_c04920 0.56 -0.1 483,952 - PGA1_c04920 0.59 -1.2 484,003 + PGA1_c04920 0.63 -0.1 484,007 + PGA1_c04920 0.63 +1.2 484,050 - PGA1_c04920 0.67 -0.7 484,128 - PGA1_c04920 0.74 -0.8 484,138 - PGA1_c04920 0.75 +0.3 484,156 + PGA1_c04920 0.76 -0.7 484,202 + PGA1_c04920 0.80 +0.2 484,235 - PGA1_c04920 0.83 -1.0 484,249 + PGA1_c04920 0.84 +0.1 484,257 + PGA1_c04920 0.85 +0.2 484,257 - PGA1_c04920 0.85 -0.7 484,300 - PGA1_c04920 0.89 -1.1 484,329 + +0.1 484,435 + -0.3 484,443 - -0.4 484,443 - +0.0 484,443 - +0.2 484,453 - +1.3 484,499 + -0.6 484,507 - -0.3 484,526 - -2.0 485,363 - -2.1 485,392 - -0.3 485,412 + -1.3 485,420 - +1.5 485,420 - +0.8 485,426 + -0.2
Or see this region's nucleotide sequence