Experiment: m.b. Doxycycline hyclate 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3902 and HP15_3903 are separated by 9 nucleotides HP15_3903 and HP15_3904 overlap by 1 nucleotides HP15_3904 and HP15_3905 are separated by 188 nucleotides
HP15_3902: HP15_3902 - hypothetical protein, at 4,132,663 to 4,132,806
_3902
HP15_3903: HP15_3903 - methionine import ATP-binding protein MetN 2, at 4,132,816 to 4,133,748
_3903
HP15_3904: HP15_3904 - binding-protein-dependent transport systems inner membrane component, at 4,133,748 to 4,134,413
_3904
HP15_3905: HP15_3905 - lipoprotein, YaeC family, at 4,134,602 to 4,135,384
_3905
Position (kb)
4133
4134
4135 Strain fitness (log2 ratio)
-2
-1
0
1 at 4132.919 kb on + strand, within HP15_3903 at 4132.963 kb on + strand, within HP15_3903 at 4133.010 kb on + strand, within HP15_3903 at 4133.017 kb on - strand, within HP15_3903 at 4133.400 kb on + strand, within HP15_3903 at 4133.409 kb on - strand, within HP15_3903 at 4133.480 kb on + strand, within HP15_3903 at 4133.514 kb on - strand, within HP15_3903 at 4133.544 kb on - strand, within HP15_3903 at 4133.569 kb on - strand, within HP15_3903 at 4133.637 kb on + strand, within HP15_3903 at 4133.687 kb on + strand at 4133.717 kb on - strand at 4133.737 kb on + strand at 4133.745 kb on - strand at 4133.757 kb on + strand at 4133.800 kb on + strand at 4133.805 kb on + strand at 4133.808 kb on - strand at 4133.827 kb on - strand, within HP15_3904 at 4133.855 kb on + strand, within HP15_3904 at 4133.995 kb on + strand, within HP15_3904 at 4134.068 kb on - strand, within HP15_3904 at 4134.131 kb on + strand, within HP15_3904 at 4134.145 kb on + strand, within HP15_3904 at 4134.326 kb on + strand, within HP15_3904 at 4134.841 kb on + strand, within HP15_3905 at 4134.886 kb on - strand at 4134.910 kb on + strand, within HP15_3905 at 4134.986 kb on + strand, within HP15_3905 at 4135.081 kb on - strand, within HP15_3905 at 4135.137 kb on + strand, within HP15_3905 at 4135.158 kb on + strand, within HP15_3905 at 4135.197 kb on + strand, within HP15_3905 at 4135.197 kb on + strand, within HP15_3905 at 4135.204 kb on - strand, within HP15_3905 at 4135.247 kb on + strand, within HP15_3905 at 4135.362 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.032 mg/ml remove 4,132,919 + HP15_3903 0.11 +0.1 4,132,963 + HP15_3903 0.16 +0.3 4,133,010 + HP15_3903 0.21 +0.6 4,133,017 - HP15_3903 0.22 +0.5 4,133,400 + HP15_3903 0.63 +1.3 4,133,409 - HP15_3903 0.64 -2.1 4,133,480 + HP15_3903 0.71 +1.3 4,133,514 - HP15_3903 0.75 -0.1 4,133,544 - HP15_3903 0.78 +0.2 4,133,569 - HP15_3903 0.81 +1.3 4,133,637 + HP15_3903 0.88 -0.8 4,133,687 + -1.7 4,133,717 - +0.7 4,133,737 + +0.3 4,133,745 - -0.1 4,133,757 + +0.6 4,133,800 + -0.6 4,133,805 + -0.6 4,133,808 - +0.4 4,133,827 - HP15_3904 0.12 -0.3 4,133,855 + HP15_3904 0.16 -0.8 4,133,995 + HP15_3904 0.37 +1.6 4,134,068 - HP15_3904 0.48 -0.5 4,134,131 + HP15_3904 0.58 -2.3 4,134,145 + HP15_3904 0.60 -0.9 4,134,326 + HP15_3904 0.87 -1.4 4,134,841 + HP15_3905 0.31 +0.3 4,134,886 - +0.3 4,134,910 + HP15_3905 0.39 -0.3 4,134,986 + HP15_3905 0.49 -2.1 4,135,081 - HP15_3905 0.61 +0.7 4,135,137 + HP15_3905 0.68 -0.5 4,135,158 + HP15_3905 0.71 -0.3 4,135,197 + HP15_3905 0.76 -2.0 4,135,197 + HP15_3905 0.76 -0.5 4,135,204 - HP15_3905 0.77 -0.2 4,135,247 + HP15_3905 0.82 -2.0 4,135,362 - -0.9
Or see this region's nucleotide sequence