Strain Fitness in Marinobacter adhaerens HP15 around HP15_356

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_353 and HP15_354 are separated by 1 nucleotidesHP15_354 and HP15_355 are separated by 63 nucleotidesHP15_355 and HP15_356 are separated by 13 nucleotidesHP15_356 and HP15_357 are separated by 7 nucleotides HP15_353: HP15_353 - conserved hypothetical protein, at 348,208 to 348,948 _353 HP15_354: HP15_354 - protein containing DUF583, at 348,950 to 349,435 _354 HP15_355: HP15_355 - FeS cluster insertion, at 349,499 to 349,852 _355 HP15_356: HP15_356 - anhydro-N-acetylmuramic acid kinase, at 349,866 to 350,963 _356 HP15_357: HP15_357 - peptidase M23B, at 350,971 to 352,389 _357 Position (kb) 349 350 351Strain fitness (log2 ratio) -1 0 1at 348.917 kb on + strandat 348.925 kb on - strandat 349.112 kb on + strand, within HP15_354at 349.195 kb on + strand, within HP15_354at 350.587 kb on + strand, within HP15_356at 351.255 kb on - strand, within HP15_357

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.032 mg/ml
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348,917 + -1.2
348,925 - +0.4
349,112 + HP15_354 0.33 -0.1
349,195 + HP15_354 0.50 +0.5
350,587 + HP15_356 0.66 -1.2
351,255 - HP15_357 0.20 -0.6

Or see this region's nucleotide sequence