Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21480 and PGA1_c21490 are separated by 9 nucleotides PGA1_c21490 and PGA1_c21500 overlap by 4 nucleotides PGA1_c21500 and PGA1_c21510 are separated by 338 nucleotides
PGA1_c21480: PGA1_c21480 - dnaJ domain-containing protein, at 2,225,851 to 2,226,549
_c21480
PGA1_c21490: PGA1_c21490 - putative N-acetyltransferase, at 2,226,559 to 2,227,083
_c21490
PGA1_c21500: PGA1_c21500 - hypothetical protein, at 2,227,080 to 2,227,682
_c21500
PGA1_c21510: PGA1_c21510 - methylmalonyl-CoA mutase BhbA, at 2,228,021 to 2,230,144
_c21510
Position (kb)
2227
2228 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2226.095 kb on - strand, within PGA1_c21480 at 2226.179 kb on - strand, within PGA1_c21480 at 2226.199 kb on + strand, within PGA1_c21480 at 2226.266 kb on + strand, within PGA1_c21480 at 2226.274 kb on - strand, within PGA1_c21480 at 2226.274 kb on - strand, within PGA1_c21480 at 2226.326 kb on + strand, within PGA1_c21480 at 2226.326 kb on + strand, within PGA1_c21480 at 2226.388 kb on - strand, within PGA1_c21480 at 2226.535 kb on + strand at 2226.543 kb on - strand at 2226.566 kb on + strand at 2226.574 kb on - strand at 2226.574 kb on - strand at 2226.595 kb on - strand at 2226.596 kb on - strand at 2226.630 kb on + strand, within PGA1_c21490 at 2226.630 kb on + strand, within PGA1_c21490 at 2226.638 kb on - strand, within PGA1_c21490 at 2226.638 kb on - strand, within PGA1_c21490 at 2226.638 kb on - strand, within PGA1_c21490 at 2226.688 kb on + strand, within PGA1_c21490 at 2226.846 kb on + strand, within PGA1_c21490 at 2226.846 kb on + strand, within PGA1_c21490 at 2226.846 kb on + strand, within PGA1_c21490 at 2226.846 kb on + strand, within PGA1_c21490 at 2226.854 kb on - strand, within PGA1_c21490 at 2226.854 kb on - strand, within PGA1_c21490 at 2226.858 kb on + strand, within PGA1_c21490 at 2226.865 kb on + strand, within PGA1_c21490 at 2226.865 kb on + strand, within PGA1_c21490 at 2226.891 kb on + strand, within PGA1_c21490 at 2226.899 kb on - strand, within PGA1_c21490 at 2226.941 kb on - strand, within PGA1_c21490 at 2227.034 kb on - strand at 2227.069 kb on - strand at 2227.099 kb on - strand at 2227.099 kb on - strand at 2227.120 kb on + strand at 2227.182 kb on + strand, within PGA1_c21500 at 2227.187 kb on + strand, within PGA1_c21500 at 2227.187 kb on + strand, within PGA1_c21500 at 2227.234 kb on - strand, within PGA1_c21500 at 2227.234 kb on - strand, within PGA1_c21500 at 2227.259 kb on + strand, within PGA1_c21500 at 2227.259 kb on + strand, within PGA1_c21500 at 2227.259 kb on + strand, within PGA1_c21500 at 2227.259 kb on + strand, within PGA1_c21500 at 2227.264 kb on + strand, within PGA1_c21500 at 2227.311 kb on + strand, within PGA1_c21500 at 2227.412 kb on + strand, within PGA1_c21500 at 2227.469 kb on + strand, within PGA1_c21500 at 2227.496 kb on - strand, within PGA1_c21500 at 2227.521 kb on + strand, within PGA1_c21500 at 2227.536 kb on - strand, within PGA1_c21500 at 2227.554 kb on - strand, within PGA1_c21500 at 2227.640 kb on + strand at 2227.894 kb on + strand at 2227.894 kb on + strand at 2227.934 kb on - strand at 2227.952 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 2,226,095 - PGA1_c21480 0.35 +0.6 2,226,179 - PGA1_c21480 0.47 -0.0 2,226,199 + PGA1_c21480 0.50 +0.7 2,226,266 + PGA1_c21480 0.59 -0.3 2,226,274 - PGA1_c21480 0.61 -1.0 2,226,274 - PGA1_c21480 0.61 +0.7 2,226,326 + PGA1_c21480 0.68 -1.3 2,226,326 + PGA1_c21480 0.68 -1.1 2,226,388 - PGA1_c21480 0.77 -0.6 2,226,535 + +0.4 2,226,543 - -0.2 2,226,566 + +0.6 2,226,574 - +0.9 2,226,574 - -1.1 2,226,595 - -0.9 2,226,596 - -0.4 2,226,630 + PGA1_c21490 0.14 -1.3 2,226,630 + PGA1_c21490 0.14 +0.1 2,226,638 - PGA1_c21490 0.15 +0.6 2,226,638 - PGA1_c21490 0.15 +0.6 2,226,638 - PGA1_c21490 0.15 -0.1 2,226,688 + PGA1_c21490 0.25 -0.3 2,226,846 + PGA1_c21490 0.55 -0.3 2,226,846 + PGA1_c21490 0.55 -0.3 2,226,846 + PGA1_c21490 0.55 +0.1 2,226,846 + PGA1_c21490 0.55 +0.7 2,226,854 - PGA1_c21490 0.56 -0.1 2,226,854 - PGA1_c21490 0.56 -0.2 2,226,858 + PGA1_c21490 0.57 +0.1 2,226,865 + PGA1_c21490 0.58 +0.9 2,226,865 + PGA1_c21490 0.58 -2.3 2,226,891 + PGA1_c21490 0.63 +1.3 2,226,899 - PGA1_c21490 0.65 -0.5 2,226,941 - PGA1_c21490 0.73 +1.3 2,227,034 - -0.9 2,227,069 - +0.5 2,227,099 - +0.9 2,227,099 - +0.9 2,227,120 + -0.4 2,227,182 + PGA1_c21500 0.17 -1.4 2,227,187 + PGA1_c21500 0.18 -0.3 2,227,187 + PGA1_c21500 0.18 -0.5 2,227,234 - PGA1_c21500 0.26 -0.9 2,227,234 - PGA1_c21500 0.26 -3.0 2,227,259 + PGA1_c21500 0.30 -0.9 2,227,259 + PGA1_c21500 0.30 -0.3 2,227,259 + PGA1_c21500 0.30 +0.3 2,227,259 + PGA1_c21500 0.30 -0.1 2,227,264 + PGA1_c21500 0.31 -1.0 2,227,311 + PGA1_c21500 0.38 -0.4 2,227,412 + PGA1_c21500 0.55 -0.2 2,227,469 + PGA1_c21500 0.65 -1.1 2,227,496 - PGA1_c21500 0.69 -0.2 2,227,521 + PGA1_c21500 0.73 -0.5 2,227,536 - PGA1_c21500 0.76 +0.6 2,227,554 - PGA1_c21500 0.79 -1.0 2,227,640 + -0.3 2,227,894 + -0.5 2,227,894 + -0.0 2,227,934 - +1.1 2,227,952 + +0.7
Or see this region's nucleotide sequence