Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21430 and PGA1_c21440 are separated by 8 nucleotides PGA1_c21440 and PGA1_c21450 are separated by 47 nucleotides
PGA1_c21430: PGA1_c21430 - putative permease, at 2,220,788 to 2,221,855
_c21430
PGA1_c21440: PGA1_c21440 - hypothetical protein, at 2,221,864 to 2,222,634
_c21440
PGA1_c21450: PGA1_c21450 - phosphatase-like protein, at 2,222,682 to 2,224,226
_c21450
Position (kb)
2221
2222
2223 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2221.039 kb on - strand, within PGA1_c21430 at 2221.077 kb on - strand, within PGA1_c21430 at 2221.153 kb on - strand, within PGA1_c21430 at 2221.166 kb on + strand, within PGA1_c21430 at 2221.174 kb on - strand, within PGA1_c21430 at 2221.186 kb on + strand, within PGA1_c21430 at 2221.319 kb on - strand, within PGA1_c21430 at 2221.339 kb on + strand, within PGA1_c21430 at 2221.379 kb on + strand, within PGA1_c21430 at 2221.410 kb on + strand, within PGA1_c21430 at 2221.416 kb on + strand, within PGA1_c21430 at 2221.440 kb on - strand, within PGA1_c21430 at 2221.448 kb on - strand, within PGA1_c21430 at 2221.453 kb on - strand, within PGA1_c21430 at 2221.480 kb on - strand, within PGA1_c21430 at 2221.486 kb on - strand, within PGA1_c21430 at 2221.539 kb on - strand, within PGA1_c21430 at 2221.539 kb on - strand, within PGA1_c21430 at 2221.546 kb on + strand, within PGA1_c21430 at 2221.570 kb on + strand, within PGA1_c21430 at 2221.578 kb on - strand, within PGA1_c21430 at 2221.702 kb on + strand, within PGA1_c21430 at 2221.726 kb on + strand, within PGA1_c21430 at 2221.770 kb on + strand at 2221.770 kb on + strand at 2221.770 kb on + strand at 2221.778 kb on - strand at 2221.805 kb on + strand at 2221.813 kb on - strand at 2221.828 kb on + strand at 2221.836 kb on - strand at 2221.836 kb on - strand at 2221.843 kb on - strand at 2221.862 kb on - strand at 2222.040 kb on + strand, within PGA1_c21440 at 2222.165 kb on - strand, within PGA1_c21440 at 2222.262 kb on + strand, within PGA1_c21440 at 2222.268 kb on + strand, within PGA1_c21440 at 2222.650 kb on + strand at 2222.740 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 2,221,039 - PGA1_c21430 0.24 -2.4 2,221,077 - PGA1_c21430 0.27 +2.1 2,221,153 - PGA1_c21430 0.34 -0.7 2,221,166 + PGA1_c21430 0.35 +0.5 2,221,174 - PGA1_c21430 0.36 -0.2 2,221,186 + PGA1_c21430 0.37 -2.0 2,221,319 - PGA1_c21430 0.50 -1.2 2,221,339 + PGA1_c21430 0.52 +1.0 2,221,379 + PGA1_c21430 0.55 -0.2 2,221,410 + PGA1_c21430 0.58 +1.3 2,221,416 + PGA1_c21430 0.59 +0.2 2,221,440 - PGA1_c21430 0.61 +0.7 2,221,448 - PGA1_c21430 0.62 -0.7 2,221,453 - PGA1_c21430 0.62 -0.5 2,221,480 - PGA1_c21430 0.65 +0.6 2,221,486 - PGA1_c21430 0.65 -0.7 2,221,539 - PGA1_c21430 0.70 +0.1 2,221,539 - PGA1_c21430 0.70 +1.9 2,221,546 + PGA1_c21430 0.71 +0.1 2,221,570 + PGA1_c21430 0.73 -3.1 2,221,578 - PGA1_c21430 0.74 +0.4 2,221,702 + PGA1_c21430 0.86 -0.9 2,221,726 + PGA1_c21430 0.88 -3.0 2,221,770 + +0.4 2,221,770 + -0.5 2,221,770 + -1.3 2,221,778 - -0.4 2,221,805 + +0.1 2,221,813 - -1.2 2,221,828 + -0.6 2,221,836 - -1.7 2,221,836 - -1.6 2,221,843 - -1.1 2,221,862 - +0.5 2,222,040 + PGA1_c21440 0.23 -2.1 2,222,165 - PGA1_c21440 0.39 -2.1 2,222,262 + PGA1_c21440 0.52 -2.4 2,222,268 + PGA1_c21440 0.52 -0.9 2,222,650 + -0.7 2,222,740 - -1.9
Or see this region's nucleotide sequence