Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21410 and PGA1_c21420 are separated by 170 nucleotides PGA1_c21420 and PGA1_c21430 are separated by 208 nucleotides
PGA1_c21410: PGA1_c21410 - lipoprotein-releasing system transmembrane protein LolC, at 2,217,761 to 2,219,053
_c21410
PGA1_c21420: PGA1_c21420 - prolyl-tRNA synthetase ProS, at 2,219,224 to 2,220,579
_c21420
PGA1_c21430: PGA1_c21430 - putative permease, at 2,220,788 to 2,221,855
_c21430
Position (kb)
2219
2220
2221 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2219.090 kb on - strand at 2219.110 kb on + strand at 2219.275 kb on - strand at 2220.622 kb on - strand at 2220.661 kb on - strand at 2220.669 kb on + strand at 2220.677 kb on - strand at 2220.700 kb on + strand at 2220.700 kb on + strand at 2220.708 kb on - strand at 2220.760 kb on + strand at 2220.778 kb on + strand at 2220.778 kb on + strand at 2220.792 kb on - strand at 2221.039 kb on - strand, within PGA1_c21430 at 2221.077 kb on - strand, within PGA1_c21430 at 2221.153 kb on - strand, within PGA1_c21430 at 2221.166 kb on + strand, within PGA1_c21430 at 2221.174 kb on - strand, within PGA1_c21430 at 2221.186 kb on + strand, within PGA1_c21430 at 2221.319 kb on - strand, within PGA1_c21430 at 2221.339 kb on + strand, within PGA1_c21430 at 2221.379 kb on + strand, within PGA1_c21430 at 2221.410 kb on + strand, within PGA1_c21430 at 2221.416 kb on + strand, within PGA1_c21430 at 2221.440 kb on - strand, within PGA1_c21430 at 2221.448 kb on - strand, within PGA1_c21430 at 2221.453 kb on - strand, within PGA1_c21430 at 2221.480 kb on - strand, within PGA1_c21430 at 2221.486 kb on - strand, within PGA1_c21430 at 2221.539 kb on - strand, within PGA1_c21430 at 2221.539 kb on - strand, within PGA1_c21430 at 2221.546 kb on + strand, within PGA1_c21430 at 2221.570 kb on + strand, within PGA1_c21430 at 2221.578 kb on - strand, within PGA1_c21430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 2,219,090 - -1.7 2,219,110 + +0.1 2,219,275 - -0.6 2,220,622 - +0.4 2,220,661 - +0.1 2,220,669 + -1.1 2,220,677 - -0.8 2,220,700 + +0.4 2,220,700 + +0.5 2,220,708 - -0.6 2,220,760 + -0.3 2,220,778 + -2.1 2,220,778 + +1.1 2,220,792 - +0.3 2,221,039 - PGA1_c21430 0.24 -2.4 2,221,077 - PGA1_c21430 0.27 +2.1 2,221,153 - PGA1_c21430 0.34 -0.7 2,221,166 + PGA1_c21430 0.35 +0.5 2,221,174 - PGA1_c21430 0.36 -0.2 2,221,186 + PGA1_c21430 0.37 -2.0 2,221,319 - PGA1_c21430 0.50 -1.2 2,221,339 + PGA1_c21430 0.52 +1.0 2,221,379 + PGA1_c21430 0.55 -0.2 2,221,410 + PGA1_c21430 0.58 +1.3 2,221,416 + PGA1_c21430 0.59 +0.2 2,221,440 - PGA1_c21430 0.61 +0.7 2,221,448 - PGA1_c21430 0.62 -0.7 2,221,453 - PGA1_c21430 0.62 -0.5 2,221,480 - PGA1_c21430 0.65 +0.6 2,221,486 - PGA1_c21430 0.65 -0.7 2,221,539 - PGA1_c21430 0.70 +0.1 2,221,539 - PGA1_c21430 0.70 +1.9 2,221,546 + PGA1_c21430 0.71 +0.1 2,221,570 + PGA1_c21430 0.73 -3.1 2,221,578 - PGA1_c21430 0.74 +0.4
Or see this region's nucleotide sequence