Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21180 and PGA1_c21190 are separated by 300 nucleotides PGA1_c21190 and PGA1_c21200 are separated by 4 nucleotides
PGA1_c21180: PGA1_c21180 - thymidylate synthase ThyA, at 2,192,685 to 2,193,518
_c21180
PGA1_c21190: PGA1_c21190 - hypothetical protein, at 2,193,819 to 2,194,757
_c21190
PGA1_c21200: PGA1_c21200 - hypothetical protein, at 2,194,762 to 2,196,186
_c21200
Position (kb)
2193
2194
2195 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2193.614 kb on - strand at 2193.668 kb on - strand at 2193.668 kb on - strand at 2193.668 kb on - strand at 2193.687 kb on - strand at 2193.774 kb on + strand at 2193.840 kb on - strand at 2193.872 kb on - strand at 2193.945 kb on + strand, within PGA1_c21190 at 2194.082 kb on + strand, within PGA1_c21190 at 2194.090 kb on - strand, within PGA1_c21190 at 2194.090 kb on - strand at 2194.090 kb on - strand, within PGA1_c21190 at 2194.090 kb on - strand, within PGA1_c21190 at 2194.091 kb on - strand, within PGA1_c21190 at 2194.092 kb on + strand, within PGA1_c21190 at 2194.092 kb on + strand, within PGA1_c21190 at 2194.092 kb on + strand, within PGA1_c21190 at 2194.092 kb on + strand, within PGA1_c21190 at 2194.092 kb on + strand, within PGA1_c21190 at 2194.092 kb on + strand, within PGA1_c21190 at 2194.095 kb on - strand, within PGA1_c21190 at 2194.205 kb on + strand, within PGA1_c21190 at 2194.288 kb on + strand, within PGA1_c21190 at 2194.293 kb on + strand, within PGA1_c21190 at 2194.368 kb on + strand, within PGA1_c21190 at 2194.390 kb on - strand, within PGA1_c21190 at 2194.490 kb on - strand, within PGA1_c21190 at 2194.520 kb on - strand, within PGA1_c21190 at 2194.520 kb on - strand, within PGA1_c21190 at 2194.643 kb on - strand, within PGA1_c21190 at 2194.658 kb on + strand, within PGA1_c21190 at 2194.743 kb on - strand at 2194.756 kb on + strand at 2194.838 kb on - strand at 2195.130 kb on + strand, within PGA1_c21200 at 2195.130 kb on + strand, within PGA1_c21200 at 2195.138 kb on - strand, within PGA1_c21200 at 2195.159 kb on + strand, within PGA1_c21200 at 2195.159 kb on + strand, within PGA1_c21200 at 2195.164 kb on + strand, within PGA1_c21200 at 2195.172 kb on - strand, within PGA1_c21200 at 2195.188 kb on + strand, within PGA1_c21200 at 2195.198 kb on + strand, within PGA1_c21200 at 2195.218 kb on + strand, within PGA1_c21200 at 2195.228 kb on + strand, within PGA1_c21200 at 2195.243 kb on - strand, within PGA1_c21200 at 2195.296 kb on - strand, within PGA1_c21200 at 2195.418 kb on - strand, within PGA1_c21200 at 2195.480 kb on - strand, within PGA1_c21200 at 2195.504 kb on + strand, within PGA1_c21200 at 2195.512 kb on + strand, within PGA1_c21200 at 2195.517 kb on + strand, within PGA1_c21200 at 2195.561 kb on + strand, within PGA1_c21200 at 2195.568 kb on - strand, within PGA1_c21200 at 2195.669 kb on - strand, within PGA1_c21200 at 2195.699 kb on - strand, within PGA1_c21200
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 2,193,614 - +0.7 2,193,668 - +1.4 2,193,668 - +0.2 2,193,668 - +0.4 2,193,687 - -1.6 2,193,774 + -0.7 2,193,840 - -0.9 2,193,872 - -2.5 2,193,945 + PGA1_c21190 0.13 -0.6 2,194,082 + PGA1_c21190 0.28 +0.0 2,194,090 - PGA1_c21190 0.29 -1.8 2,194,090 - -1.9 2,194,090 - PGA1_c21190 0.29 -2.2 2,194,090 - PGA1_c21190 0.29 -0.9 2,194,091 - PGA1_c21190 0.29 -1.3 2,194,092 + PGA1_c21190 0.29 +0.1 2,194,092 + PGA1_c21190 0.29 -2.3 2,194,092 + PGA1_c21190 0.29 -0.8 2,194,092 + PGA1_c21190 0.29 +0.1 2,194,092 + PGA1_c21190 0.29 -0.3 2,194,092 + PGA1_c21190 0.29 -2.6 2,194,095 - PGA1_c21190 0.29 -0.6 2,194,205 + PGA1_c21190 0.41 +0.7 2,194,288 + PGA1_c21190 0.50 -0.3 2,194,293 + PGA1_c21190 0.50 -1.1 2,194,368 + PGA1_c21190 0.58 -1.3 2,194,390 - PGA1_c21190 0.61 +1.4 2,194,490 - PGA1_c21190 0.71 +0.5 2,194,520 - PGA1_c21190 0.75 -3.5 2,194,520 - PGA1_c21190 0.75 -0.4 2,194,643 - PGA1_c21190 0.88 -1.2 2,194,658 + PGA1_c21190 0.89 -1.8 2,194,743 - -1.9 2,194,756 + -1.2 2,194,838 - +0.4 2,195,130 + PGA1_c21200 0.26 -0.1 2,195,130 + PGA1_c21200 0.26 -2.0 2,195,138 - PGA1_c21200 0.26 -0.3 2,195,159 + PGA1_c21200 0.28 -1.9 2,195,159 + PGA1_c21200 0.28 +0.3 2,195,164 + PGA1_c21200 0.28 -0.8 2,195,172 - PGA1_c21200 0.29 -1.9 2,195,188 + PGA1_c21200 0.30 +1.0 2,195,198 + PGA1_c21200 0.31 -0.3 2,195,218 + PGA1_c21200 0.32 +0.4 2,195,228 + PGA1_c21200 0.33 -0.7 2,195,243 - PGA1_c21200 0.34 -2.1 2,195,296 - PGA1_c21200 0.37 +1.0 2,195,418 - PGA1_c21200 0.46 -0.9 2,195,480 - PGA1_c21200 0.50 -0.9 2,195,504 + PGA1_c21200 0.52 +0.3 2,195,512 + PGA1_c21200 0.53 -0.7 2,195,517 + PGA1_c21200 0.53 -0.0 2,195,561 + PGA1_c21200 0.56 -0.1 2,195,568 - PGA1_c21200 0.57 -2.0 2,195,669 - PGA1_c21200 0.64 -2.6 2,195,699 - PGA1_c21200 0.66 -1.0
Or see this region's nucleotide sequence