Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c20070 and PGA1_c20080 overlap by 11 nucleotides PGA1_c20080 and PGA1_c20090 are separated by 76 nucleotides PGA1_c20090 and PGA1_c20100 overlap by 4 nucleotides PGA1_c20100 and PGA1_c20110 are separated by 94 nucleotides
PGA1_c20070: PGA1_c20070 - transposase, at 2,081,672 to 2,082,463
_c20070
PGA1_c20080: PGA1_c20080 - transposase, at 2,082,453 to 2,083,982
_c20080
PGA1_c20090: PGA1_c20090 - putative phage late control gene D, at 2,084,059 to 2,084,472
_c20090
PGA1_c20100: PGA1_c20100 - Protein of unknown function (DUF1353)., at 2,084,469 to 2,084,840
_c20100
PGA1_c20110: PGA1_c20110 - hypothetical protein, at 2,084,935 to 2,086,581
_c20110
Position (kb)
2082
2083
2084 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2081.453 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.458 kb on + strand at 2081.459 kb on - strand at 2081.459 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.466 kb on - strand at 2081.469 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.476 kb on + strand at 2081.477 kb on - strand at 2081.478 kb on - strand at 2081.478 kb on - strand at 2081.478 kb on - strand at 2081.478 kb on - strand at 2081.478 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.484 kb on - strand at 2081.522 kb on + strand at 2081.528 kb on + strand at 2081.530 kb on - strand at 2081.533 kb on + strand at 2081.536 kb on - strand at 2081.541 kb on - strand at 2081.541 kb on - strand at 2081.541 kb on - strand at 2081.541 kb on - strand at 2081.551 kb on + strand at 2081.551 kb on + strand at 2081.552 kb on - strand at 2081.552 kb on - strand at 2081.554 kb on + strand at 2081.559 kb on - strand at 2081.566 kb on - strand at 2081.566 kb on - strand at 2081.571 kb on + strand at 2081.572 kb on - strand at 2081.583 kb on + strand at 2081.585 kb on - strand at 2081.609 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.614 kb on - strand at 2081.623 kb on - strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.071 kb on + strand at 2084.104 kb on - strand, within PGA1_c20090 at 2084.127 kb on - strand, within PGA1_c20090 at 2084.149 kb on + strand, within PGA1_c20090 at 2084.153 kb on - strand, within PGA1_c20090 at 2084.157 kb on - strand, within PGA1_c20090 at 2084.194 kb on - strand, within PGA1_c20090 at 2084.203 kb on - strand, within PGA1_c20090 at 2084.209 kb on - strand, within PGA1_c20090 at 2084.239 kb on - strand, within PGA1_c20090 at 2084.260 kb on + strand, within PGA1_c20090 at 2084.265 kb on + strand, within PGA1_c20090 at 2084.265 kb on + strand, within PGA1_c20090 at 2084.265 kb on + strand, within PGA1_c20090 at 2084.265 kb on + strand, within PGA1_c20090 at 2084.268 kb on - strand, within PGA1_c20090 at 2084.268 kb on - strand, within PGA1_c20090 at 2084.268 kb on - strand, within PGA1_c20090 at 2084.273 kb on - strand, within PGA1_c20090 at 2084.283 kb on - strand, within PGA1_c20090 at 2084.297 kb on + strand, within PGA1_c20090 at 2084.298 kb on + strand, within PGA1_c20090 at 2084.299 kb on + strand, within PGA1_c20090 at 2084.299 kb on + strand, within PGA1_c20090 at 2084.305 kb on - strand, within PGA1_c20090 at 2084.305 kb on - strand, within PGA1_c20090 at 2084.305 kb on - strand, within PGA1_c20090 at 2084.313 kb on + strand, within PGA1_c20090 at 2084.313 kb on + strand, within PGA1_c20090 at 2084.321 kb on - strand, within PGA1_c20090 at 2084.337 kb on + strand, within PGA1_c20090 at 2084.414 kb on + strand, within PGA1_c20090 at 2084.422 kb on - strand, within PGA1_c20090 at 2084.443 kb on + strand at 2084.518 kb on + strand, within PGA1_c20100 at 2084.525 kb on - strand, within PGA1_c20100 at 2084.556 kb on - strand, within PGA1_c20100 at 2084.628 kb on + strand, within PGA1_c20100 at 2084.636 kb on + strand, within PGA1_c20100 at 2084.644 kb on - strand, within PGA1_c20100 at 2084.644 kb on - strand, within PGA1_c20100 at 2084.684 kb on - strand, within PGA1_c20100 at 2084.698 kb on - strand, within PGA1_c20100 at 2084.758 kb on + strand, within PGA1_c20100 at 2084.758 kb on + strand, within PGA1_c20100 at 2084.758 kb on + strand, within PGA1_c20100 at 2084.758 kb on + strand, within PGA1_c20100 at 2084.758 kb on + strand, within PGA1_c20100 at 2084.758 kb on + strand, within PGA1_c20100 at 2084.758 kb on + strand, within PGA1_c20100 at 2084.764 kb on - strand, within PGA1_c20100 at 2084.766 kb on - strand, within PGA1_c20100 at 2084.766 kb on - strand, within PGA1_c20100 at 2084.766 kb on - strand, within PGA1_c20100 at 2084.766 kb on - strand, within PGA1_c20100 at 2084.766 kb on - strand, within PGA1_c20100 at 2084.779 kb on - strand, within PGA1_c20100 at 2084.779 kb on - strand, within PGA1_c20100 at 2084.779 kb on - strand, within PGA1_c20100 at 2084.849 kb on + strand at 2084.849 kb on + strand at 2084.850 kb on + strand at 2084.857 kb on - strand at 2084.875 kb on - strand at 2084.890 kb on + strand at 2084.890 kb on + strand at 2084.896 kb on + strand at 2084.901 kb on + strand at 2084.901 kb on + strand at 2084.904 kb on + strand at 2084.909 kb on - strand at 2084.909 kb on - strand at 2084.909 kb on - strand at 2084.940 kb on - strand at 2084.966 kb on + strand at 2084.966 kb on + strand at 2084.966 kb on + strand at 2084.974 kb on - strand at 2084.974 kb on - strand at 2084.974 kb on - strand at 2084.974 kb on - strand at 2084.978 kb on - strand at 2084.978 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 2,081,453 + -1.3 2,081,458 + -0.2 2,081,458 + -0.9 2,081,458 + +0.4 2,081,458 + +0.1 2,081,458 + +0.7 2,081,458 + +0.3 2,081,458 + -1.5 2,081,458 + -0.3 2,081,458 + -2.1 2,081,458 + +0.1 2,081,458 + -0.4 2,081,458 + +1.1 2,081,458 + +2.7 2,081,458 + -1.4 2,081,458 + -1.2 2,081,458 + -1.3 2,081,458 + -0.9 2,081,458 + -0.2 2,081,459 - +0.5 2,081,459 - +1.7 2,081,466 - +0.4 2,081,466 - -0.6 2,081,466 - +0.3 2,081,466 - -0.3 2,081,466 - +0.5 2,081,466 - -0.2 2,081,466 - +0.5 2,081,466 - -0.1 2,081,466 - -0.3 2,081,466 - +0.7 2,081,466 - -2.5 2,081,466 - +0.7 2,081,466 - -1.1 2,081,466 - -0.3 2,081,466 - +0.4 2,081,466 - +0.0 2,081,466 - -0.0 2,081,466 - +1.3 2,081,466 - +0.1 2,081,466 - +1.5 2,081,469 + +0.7 2,081,476 + -0.3 2,081,476 + -1.4 2,081,476 + -0.0 2,081,476 + +0.7 2,081,476 + +1.7 2,081,476 + -1.3 2,081,476 + +0.3 2,081,476 + -0.5 2,081,476 + -0.1 2,081,476 + -0.2 2,081,476 + +0.3 2,081,477 - +1.1 2,081,478 - -0.3 2,081,478 - -0.9 2,081,478 - -1.9 2,081,478 - -0.3 2,081,478 - +0.1 2,081,484 - +0.1 2,081,484 - +1.0 2,081,484 - -0.3 2,081,484 - -0.0 2,081,484 - +1.7 2,081,484 - -0.6 2,081,484 - -0.5 2,081,484 - -0.4 2,081,484 - -1.2 2,081,484 - -3.0 2,081,522 + -1.5 2,081,528 + +0.4 2,081,530 - -2.5 2,081,533 + +1.7 2,081,536 - +2.3 2,081,541 - +1.4 2,081,541 - -0.3 2,081,541 - -0.3 2,081,541 - -1.8 2,081,551 + -0.1 2,081,551 + +0.9 2,081,552 - -0.7 2,081,552 - +0.0 2,081,554 + +1.0 2,081,559 - +0.2 2,081,566 - +2.4 2,081,566 - +0.9 2,081,571 + -1.0 2,081,572 - -0.2 2,081,583 + -1.6 2,081,585 - -0.6 2,081,609 - -1.1 2,081,614 - -2.3 2,081,614 - +0.0 2,081,614 - -0.9 2,081,614 - +0.4 2,081,614 - +1.3 2,081,614 - -1.9 2,081,614 - +1.3 2,081,614 - -0.8 2,081,614 - -0.3 2,081,614 - +1.4 2,081,614 - -0.3 2,081,614 - +1.1 2,081,623 - -0.9 2,084,071 + -1.9 2,084,071 + +0.1 2,084,071 + -0.9 2,084,071 + -0.9 2,084,071 + -2.6 2,084,071 + +0.7 2,084,071 + -1.5 2,084,071 + +0.0 2,084,071 + -3.1 2,084,071 + -1.3 2,084,071 + -0.9 2,084,071 + +0.4 2,084,104 - PGA1_c20090 0.11 -0.6 2,084,127 - PGA1_c20090 0.16 +0.5 2,084,149 + PGA1_c20090 0.22 -1.6 2,084,153 - PGA1_c20090 0.23 +0.4 2,084,157 - PGA1_c20090 0.24 +0.5 2,084,194 - PGA1_c20090 0.33 -0.9 2,084,203 - PGA1_c20090 0.35 +0.7 2,084,209 - PGA1_c20090 0.36 -1.0 2,084,239 - PGA1_c20090 0.43 -0.6 2,084,260 + PGA1_c20090 0.49 -0.2 2,084,265 + PGA1_c20090 0.50 -2.1 2,084,265 + PGA1_c20090 0.50 -0.2 2,084,265 + PGA1_c20090 0.50 +1.0 2,084,265 + PGA1_c20090 0.50 -1.3 2,084,268 - PGA1_c20090 0.50 -1.9 2,084,268 - PGA1_c20090 0.50 -1.5 2,084,268 - PGA1_c20090 0.50 -2.1 2,084,273 - PGA1_c20090 0.52 -0.2 2,084,283 - PGA1_c20090 0.54 -0.6 2,084,297 + PGA1_c20090 0.57 -1.1 2,084,298 + PGA1_c20090 0.58 -2.5 2,084,299 + PGA1_c20090 0.58 -0.9 2,084,299 + PGA1_c20090 0.58 -1.4 2,084,305 - PGA1_c20090 0.59 +0.4 2,084,305 - PGA1_c20090 0.59 +0.7 2,084,305 - PGA1_c20090 0.59 -0.2 2,084,313 + PGA1_c20090 0.61 -3.0 2,084,313 + PGA1_c20090 0.61 -1.5 2,084,321 - PGA1_c20090 0.63 -1.5 2,084,337 + PGA1_c20090 0.67 -0.1 2,084,414 + PGA1_c20090 0.86 -0.7 2,084,422 - PGA1_c20090 0.88 +1.0 2,084,443 + -0.1 2,084,518 + PGA1_c20100 0.13 -0.3 2,084,525 - PGA1_c20100 0.15 -0.9 2,084,556 - PGA1_c20100 0.23 -0.3 2,084,628 + PGA1_c20100 0.43 -0.3 2,084,636 + PGA1_c20100 0.45 -0.9 2,084,644 - PGA1_c20100 0.47 -0.9 2,084,644 - PGA1_c20100 0.47 +1.3 2,084,684 - PGA1_c20100 0.58 +1.4 2,084,698 - PGA1_c20100 0.62 -0.9 2,084,758 + PGA1_c20100 0.78 -0.3 2,084,758 + PGA1_c20100 0.78 -1.8 2,084,758 + PGA1_c20100 0.78 -0.5 2,084,758 + PGA1_c20100 0.78 -2.1 2,084,758 + PGA1_c20100 0.78 -1.6 2,084,758 + PGA1_c20100 0.78 -0.5 2,084,758 + PGA1_c20100 0.78 -1.8 2,084,764 - PGA1_c20100 0.79 -1.9 2,084,766 - PGA1_c20100 0.80 +0.3 2,084,766 - PGA1_c20100 0.80 -1.9 2,084,766 - PGA1_c20100 0.80 -0.9 2,084,766 - PGA1_c20100 0.80 +0.7 2,084,766 - PGA1_c20100 0.80 -0.3 2,084,779 - PGA1_c20100 0.83 +0.7 2,084,779 - PGA1_c20100 0.83 -1.2 2,084,779 - PGA1_c20100 0.83 +0.1 2,084,849 + +0.1 2,084,849 + -0.0 2,084,850 + -0.3 2,084,857 - -1.4 2,084,875 - -1.3 2,084,890 + +0.1 2,084,890 + -1.3 2,084,896 + +0.2 2,084,901 + -2.9 2,084,901 + -1.1 2,084,904 + -1.9 2,084,909 - -0.3 2,084,909 - -1.6 2,084,909 - -0.5 2,084,940 - -0.9 2,084,966 + -2.3 2,084,966 + -0.3 2,084,966 + -1.1 2,084,974 - -1.3 2,084,974 - -0.2 2,084,974 - -1.6 2,084,974 - -0.9 2,084,978 - -0.2 2,084,978 - -1.3
Or see this region's nucleotide sequence