Experiment: m.b. Furfuryl Alcohol 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c15270 and PGA1_c15280 are separated by 94 nucleotides PGA1_c15280 and PGA1_c15290 are separated by 80 nucleotides PGA1_c15290 and PGA1_c15300 are separated by 116 nucleotides
PGA1_c15270: PGA1_c15270 - alanyl-tRNA synthetase AlaS, at 1,590,587 to 1,593,238
_c15270
PGA1_c15280: PGA1_c15280 - Uncharacterized conserved protein, at 1,593,333 to 1,593,620
_c15280
PGA1_c15290: PGA1_c15290 - Lactoylglutathione lyase and related lyases, at 1,593,701 to 1,594,282
_c15290
PGA1_c15300: PGA1_c15300 - GTP-binding protein TypA, at 1,594,399 to 1,596,219
_c15300
Position (kb)
1593
1594 Strain fitness (log2 ratio)
-2
-1
0
1 at 1593.238 kb on + strand at 1593.314 kb on + strand at 1593.519 kb on - strand, within PGA1_c15280 at 1593.558 kb on + strand, within PGA1_c15280 at 1593.558 kb on + strand, within PGA1_c15280 at 1593.566 kb on - strand, within PGA1_c15280 at 1593.573 kb on - strand, within PGA1_c15280 at 1593.588 kb on - strand, within PGA1_c15280 at 1593.641 kb on + strand at 1593.649 kb on - strand at 1593.718 kb on - strand at 1593.718 kb on - strand at 1593.718 kb on - strand at 1593.732 kb on + strand at 1593.788 kb on + strand, within PGA1_c15290 at 1593.836 kb on + strand, within PGA1_c15290 at 1594.036 kb on - strand, within PGA1_c15290 at 1594.085 kb on + strand, within PGA1_c15290 at 1594.238 kb on + strand at 1594.267 kb on + strand at 1594.268 kb on - strand at 1594.275 kb on - strand at 1594.286 kb on + strand at 1594.318 kb on + strand at 1594.318 kb on + strand at 1594.326 kb on - strand at 1594.326 kb on - strand at 1594.416 kb on - strand at 1594.437 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.032 vol% remove 1,593,238 + +1.0 1,593,314 + +0.2 1,593,519 - PGA1_c15280 0.65 -0.8 1,593,558 + PGA1_c15280 0.78 +0.7 1,593,558 + PGA1_c15280 0.78 +0.1 1,593,566 - PGA1_c15280 0.81 +1.5 1,593,573 - PGA1_c15280 0.83 +0.9 1,593,588 - PGA1_c15280 0.89 +1.4 1,593,641 + -0.2 1,593,649 - +0.2 1,593,718 - -0.2 1,593,718 - -1.9 1,593,718 - +0.3 1,593,732 + -0.1 1,593,788 + PGA1_c15290 0.15 -0.9 1,593,836 + PGA1_c15290 0.23 +0.6 1,594,036 - PGA1_c15290 0.58 +0.8 1,594,085 + PGA1_c15290 0.66 -0.9 1,594,238 + -1.1 1,594,267 + -0.5 1,594,268 - +0.9 1,594,275 - +0.2 1,594,286 + -1.7 1,594,318 + +0.7 1,594,318 + +0.5 1,594,326 - -0.2 1,594,326 - +0.4 1,594,416 - -0.7 1,594,437 + +0.4
Or see this region's nucleotide sequence